mRNA_H-akashiwo_Contig104.8.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: A0A835Z4I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I4_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 7.330e-13 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 2 Query: 5 DADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKKEQAIIDE 160 DA+TNKLK FGFAT+ T E A+ A +VLNG KV G+ +LVKVGKKEQA IDE Sbjct: 72 DAETNKLKHFGFATYRTAEEADVAVKVLNGQKVMGEELLVKVGKKEQAAIDE 123
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: F0XVP3_AURAN (Expressed protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP3_AURAN) HSP 1 Score: 66.6 bits (161), Expect = 2.250e-11 Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 2 MDADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKKEQAIIDEMKA 169 MD++T++ K FGF TF E A +A ++LN F +EGQ +LVKVG+KEQ IIDEM A Sbjct: 39 MDSETDRPKAFGFCTFGNAEGAMQAVKLLNDFPLEGQKILVKVGRKEQVIIDEMVA 94
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: A0A7S3JUW1_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUW1_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 9.410e-10 Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 2 MDADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKKEQAIIDEMKAQ 172 +DA+T K K FGF TF+ A +A LN F + GQ +LVKVGKKEQA+ID ++ Q Sbjct: 89 LDAETEKPKAFGFCTFANANGAMRAVRSLNSFSLLGQKILVKVGKKEQALIDSLQRQ 145
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: A0A2M7LKG0_9BACT (RNA-binding protein n=2 Tax=Candidatus Roizmanbacteria TaxID=1752723 RepID=A0A2M7LKG0_9BACT) HSP 1 Score: 50.1 bits (118), Expect = 2.190e-6 Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 2 Query: 5 DADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGK 136 D +T + KGFGF TF++PEAA KA E LNG ++EG+ ++V V K Sbjct: 38 DRETGRSKGFGFVTFASPEAAQKALE-LNGKEIEGRTIVVNVAK 80
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: D7FJT5_ECTSI (Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT5_ECTSI) HSP 1 Score: 50.1 bits (118), Expect = 1.580e-5 Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 2 Query: 2 MDADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKKEQAIID 157 +D T+ K FGF T+ +AA + ++LN ++ GQP+LVKVGKKEQ ++ Sbjct: 169 VDPSTDLPKAFGFCTYHNAQAAAISVQLLNDLELAGQPILVKVGKKEQPSLE 220
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: K5X839_PHACS (Uncharacterized protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5X839_PHACS) HSP 1 Score: 49.3 bits (116), Expect = 2.940e-5 Identity = 26/57 (45.61%), Postives = 41/57 (71.93%), Query Frame = 2 Query: 2 MDADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLV-KVGKKEQAIIDEMKA 169 MD +T K +GFGF TF++PEA +KA E LNG +++G+P+ + K +K+Q + E +A Sbjct: 342 MDRNTGKSRGFGFVTFASPEAVDKALE-LNGKEIDGRPINIDKSVEKDQNQVRERRA 397
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: A0A699Z2Q7_HAELA (RRM domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z2Q7_HAELA) HSP 1 Score: 48.9 bits (115), Expect = 4.040e-5 Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 2 Query: 5 DADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKKEQAIIDEMKA 169 D +T LKGFGF F E +A +LNGFKV+GQ +++K Q +++ +A Sbjct: 173 DPETKVLKGFGFCEFQEAEGVLRAIRLLNGFKVDGQELVIKGNSATQRYVEQYEA 227
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: A0A101HLS7_9BACT (RRM domain-containing RNA-binding protein n=1 Tax=Microgenomates bacterium 39_7 TaxID=1641390 RepID=A0A101HLS7_9BACT) HSP 1 Score: 47.0 bits (110), Expect = 4.280e-5 Identity = 20/45 (44.44%), Postives = 33/45 (73.33%), Query Frame = 2 Query: 11 DTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKKEQ 145 +T++ KGFGFA FS+PEAA A E L+G +++G+ ++V + + Q Sbjct: 46 NTDRSKGFGFAEFSSPEAAQAAIEALHGTEMDGRELVVNIARPRQ 90
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: UPI000C6DAB62 (RNA-binding protein 41-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DAB62) HSP 1 Score: 48.5 bits (114), Expect = 5.420e-5 Identity = 19/42 (45.24%), Postives = 30/42 (71.43%), Query Frame = 2 Query: 14 TNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKK 139 T ++KG F TF+ P A A E++NG+K+ GQP++++ GKK Sbjct: 313 TGRMKGQAFVTFADPPLAQSALELINGYKLRGQPIIIEYGKK 354
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Match: A0A1S8W4I1_9FUNG (RRM domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W4I1_9FUNG) HSP 1 Score: 46.2 bits (108), Expect = 8.680e-5 Identity = 21/47 (44.68%), Postives = 32/47 (68.09%), Query Frame = 2 Query: 5 DADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKKEQ 145 D +T + +GFGF TFSTPEAA A + LNG +V G+ + V + +++ Sbjct: 44 DRETGRSRGFGFVTFSTPEAAELAVQQLNGQEVNGRNVRVNLANEQR 90 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig104.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig104.8.1 >prot_H-akashiwo_Contig104.8.1 ID=prot_H-akashiwo_Contig104.8.1|Name=mRNA_H-akashiwo_Contig104.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=60bp MDADTNKLKGFGFATFSTPEAANKACEVLNGFKVEGQPMLVKVGKKEQAIback to top mRNA from alignment at H-akashiwo_Contig104:354102..354609- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig104.8.1 ID=mRNA_H-akashiwo_Contig104.8.1|Name=mRNA_H-akashiwo_Contig104.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=508bp|location=Sequence derived from alignment at H-akashiwo_Contig104:354102..354609- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig104:354102..354609- >mRNA_H-akashiwo_Contig104.8.1 ID=mRNA_H-akashiwo_Contig104.8.1|Name=mRNA_H-akashiwo_Contig104.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=180bp|location=Sequence derived from alignment at H-akashiwo_Contig104:354102..354609- (Heterosigma akashiwo CCMP452)back to top |