mRNA_H-akashiwo_Contig104.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: A0A7S3UVP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVP2_HETAK) HSP 1 Score: 183 bits (465), Expect = 2.430e-56 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLKLSSSS 282 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLKLSSSS Sbjct: 102 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLKLSSSS 195
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: A0A7S2CNP4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNP4_9STRA) HSP 1 Score: 122 bits (306), Expect = 6.330e-33 Identity = 56/91 (61.54%), Postives = 76/91 (83.52%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLKLS 273 KA LF++P+ W V+D H I+ + ++ WIVKKIVE+LGEEE+TLIDFI +KL H++P +IL+ELKLVLDDDAE F++K+WRML FH +KL+ Sbjct: 50 KATLFSFPIHWDVLDAHRIVATNMRPWIVKKIVEYLGEEEKTLIDFIITKLDQHSNPHAILDELKLVLDDDAETFVLKMWRMLAFHGIKLA 140
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: A0A7S2XWQ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWQ2_9STRA) HSP 1 Score: 122 bits (307), Expect = 6.900e-32 Identity = 59/94 (62.77%), Postives = 75/94 (79.79%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLKLSSSS 282 K ALFAY V W +V +HD++ SKL+ W+ KKI E+LGEEE TLIDFI S+L+ A P+SIL+EL LVLD+DAEIF VKLWRMLIFH L+++ + Sbjct: 150 KRALFAYKVNWDLVHKHDVVGSKLRPWVSKKITEYLGEEERTLIDFIVSQLMERAHPQSILDELALVLDEDAEIFTVKLWRMLIFHELRIAQGA 243
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: A0A835Z4I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I4_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.940e-27 Identity = 51/93 (54.84%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLKLSSS 279 K ALFAYP+ W VV H I+ +K++ W+V+KI E+LGEEE TLIDF+C+KL + A P+++L+EL+LVL++DAE+F VK+WRML+F L+ +++ Sbjct: 670 KDALFAYPLDWGVVTSHGIVANKMRPWVVRKIREYLGEEEPTLIDFVCAKLEARAPPQAVLDELRLVLEEDAEVFTVKMWRMLVFCALRAAAA 762
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: A0A6B2L9W9_9EUKA (PWI domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L9W9_9EUKA) HSP 1 Score: 111 bits (277), Expect = 9.520e-27 Identity = 48/90 (53.33%), Postives = 71/90 (78.89%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLKL 270 K ALFAY + WA+V+E I++ K++ W+ KKIVE L EEE TLI++IC KL H+ P+ IL++L++VLDD+A F++K+WRMLIF++L + Sbjct: 229 KEALFAYVIDWAIVEEKQIVEQKMRPWVTKKIVELLDEEEPTLIEYICKKLCDHSSPQDILDQLQVVLDDEASAFVIKMWRMLIFNMLNV 318
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: A0A4U5LNI4_STECR (PWI domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5LNI4_STECR) HSP 1 Score: 103 bits (256), Expect = 1.300e-25 Identity = 43/85 (50.59%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIF 255 K LFAYP+ W VDE D++KS+++ W+ KKIVE++GEEE +L+DF+C K+++ + P +L+++ +VLD++AEIF+VK+WR+LI+ Sbjct: 24 KDDLFAYPIEWEFVDE-DLVKSRVRPWVTKKIVEYIGEEEASLVDFVCDKVMAKSPPTKLLKDIAMVLDEEAEIFVVKMWRLLIY 107
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: K8YX66_NANGC (RNA-binding protein 25 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YX66_NANGC) HSP 1 Score: 110 bits (276), Expect = 1.540e-25 Identity = 47/89 (52.81%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLK 267 + AL YPV W VD++ ++ SKL+AW+ K++E LGEEE TLI+FICSKL SH P +L EL+LV DD+A++F+ KLWR+LI++ ++ Sbjct: 479 RKALLMYPVDWVAVDKNSLVSSKLRAWVASKVIELLGEEENTLIEFICSKLTSHCHPNKLLAELRLVFDDEADVFIEKLWRILIYYTIE 567
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: D7FJT5_ECTSI (Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT5_ECTSI) HSP 1 Score: 110 bits (276), Expect = 1.980e-25 Identity = 49/86 (56.98%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 10 LFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLK 267 LFAY + W +V++H+II+SK++ WIVKKI+E+LGEEE+TL +F+ +KL A P++IL+ELKLVL++DA +FM K+WRML+F L+ Sbjct: 710 LFAYEINWQMVEQHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFVLTKLGQRAKPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLR 795
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: A0A803TZN6_ANOCA (PWI domain-containing protein n=13 Tax=Sauria TaxID=32561 RepID=A0A803TZN6_ANOCA) HSP 1 Score: 105 bits (262), Expect = 1.420e-24 Identity = 43/85 (50.59%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIF 255 K LFAYP+ W++VD +++ +++ WI KKI+E++GEEE TL+DF+CSK+++H+ P+SIL+++ +VLD++AE+F+VK+WR+LI+ Sbjct: 221 KPELFAYPLDWSIVDST-LMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIY 304
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Match: A0A7N4PU74_SARHA (PWI domain-containing protein n=2 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4PU74_SARHA) HSP 1 Score: 105 bits (262), Expect = 1.420e-24 Identity = 43/85 (50.59%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 1 KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIF 255 K LFAYP+ W++VD +++ +++ WI KKI+E++GEEE TL+DF+CSK+++H+ P+SIL+++ +VLD++AE+F+VK+WR+LI+ Sbjct: 221 KPELFAYPLDWSIVDST-LMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIY 304 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig104.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig104.6.1 >prot_H-akashiwo_Contig104.6.1 ID=prot_H-akashiwo_Contig104.6.1|Name=mRNA_H-akashiwo_Contig104.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=95bp KAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKback to top mRNA from alignment at H-akashiwo_Contig104:341372..342688- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig104.6.1 ID=mRNA_H-akashiwo_Contig104.6.1|Name=mRNA_H-akashiwo_Contig104.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1317bp|location=Sequence derived from alignment at H-akashiwo_Contig104:341372..342688- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig104:341372..342688- >mRNA_H-akashiwo_Contig104.6.1 ID=mRNA_H-akashiwo_Contig104.6.1|Name=mRNA_H-akashiwo_Contig104.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=285bp|location=Sequence derived from alignment at H-akashiwo_Contig104:341372..342688- (Heterosigma akashiwo CCMP452)back to top |