mRNA_H-akashiwo_Contig104.49.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig104.49.1
Unique NamemRNA_H-akashiwo_Contig104.49.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A835YPU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU5_9STRA)

HSP 1 Score: 359 bits (921), Expect = 1.720e-118
Identity = 167/209 (79.90%), Postives = 192/209 (91.87%), Query Frame = 1
Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 627
            MS AIEQRNQDATCYCGNLDE  T++L+WELM+QAGPVVNVHMPKDKV+  HQGYGFVEFRSEEDA+Y IKI+NM+KL+GKP+RVNKAS DRK  DVGANLFIG L+ EVDEKLLYDTFSAFGFIT TPK+MRDP+TG SKG+GFVSYD FEA+DLAIECM+ Q+LCNRQIVVQ+A+K+D+ GERHGS AERLLAANNP+R++P+TMFA
Sbjct:    1 MSAAIEQRNQDATCYCGNLDEAATEELLWELMIQAGPVVNVHMPKDKVTNTHQGYGFVEFRSEEDAEYAIKILNMVKLFGKPLRVNKASSDRKAQDVGANLFIGQLDPEVDEKLLYDTFSAFGFITNTPKVMRDPETGASKGYGFVSYDGFEASDLAIECMNGQFLCNRQIVVQYAFKRDSHGERHGSLAERLLAANNPLRLKPHTMFA 209          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A7S2SH37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH37_9STRA)

HSP 1 Score: 350 bits (897), Expect = 2.320e-117
Identity = 173/228 (75.88%), Postives = 198/228 (86.84%), Query Frame = 1
Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPM--RMRPNTMFAENRDAPPMPPMPGHGPP 678
            MS AIEQRNQDATCYCGNLD+ V ++L+WELMLQAGPVV++HMPKDKV+  HQG+GFVEFRSEEDADY IKIMNM+KL+ KP+RVNKASQDRKT+DVGANLFIGNL+ +VDEKLLYDTFSAFG +T  PK+MRDPDTG SKGFGFVSYDSFEAADLAIECM+ Q+L NR I VQFA+K+D++GERHGSQAER+LAANNP+  RM P+TMFA     PP  P  G G P
Sbjct:    1 MSAAIEQRNQDATCYCGNLDDQVEEELLWELMLQAGPVVSLHMPKDKVTNSHQGFGFVEFRSEEDADYAIKIMNMVKLFDKPIRVNKASQDRKTMDVGANLFIGNLDAQVDEKLLYDTFSAFGGLTDQPKVMRDPDTGLSKGFGFVSYDSFEAADLAIECMNGQFLSNRAIQVQFAFKRDSQGERHGSQAERMLAANNPLARRMAPHTMFAAG---PPGMPSGGMGGP 225          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: F0YAQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ8_AURAN)

HSP 1 Score: 350 bits (898), Expect = 2.260e-116
Identity = 159/204 (77.94%), Postives = 189/204 (92.65%), Query Frame = 1
Query:   13 IEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMF 624
            +EQRNQDATCY GNLDE +T++L+WE+MLQAGP+ NVH+P+DKV+G HQGYGFVEFRSEEDADY +K+MNM+KL+GKP+RVNKASQD+KTL+VGANLF+G L+ +VDEKLLYDTFSAFG IT TPKIMRDPDTGNSKGFGFVSYDSFEA+DLAIECMHNQ+LCN+Q+ V +A+K+D+K ERHGSQAERLLAANNPM  +P+ MF
Sbjct:    6 VEQRNQDATCYVGNLDEQLTEELLWEMMLQAGPIGNVHLPRDKVTGSHQGYGFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDKKTLEVGANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPMSAKPHAMF 209          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A6H5KI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI11_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 8.070e-115
Identity = 161/209 (77.03%), Postives = 187/209 (89.47%), Query Frame = 1
Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 627
            MS +IEQRNQDATCY GNLD  VT+ L+WELM+QAGPV NVHMPKDK++G HQG+GFVEFRSE+DA+Y IKIMNM+KL+GKP+RVNKASQDRK  DVGANLFIG L+ +VDEK+LYDTFSAFGFIT TPK+MRDPDTG SKG+GFVSYD FEA+D AIECMHNQYLCNRQI VQ+AYKKD +GERHG QAERLLA+NNP + + +T+F+
Sbjct:    1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFS 209          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: D8LT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT41_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 5.240e-113
Identity = 161/209 (77.03%), Postives = 187/209 (89.47%), Query Frame = 1
Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 627
            MS +IEQRNQDATCY GNLD  VT+ L+WELM+QAGPV NVHMPKDK++G HQG+GFVEFRSE+DA+Y IKIMNM+KL+GKP+RVNKASQDRK  DVGANLFIG L+ +VDEK+LYDTFSAFGFIT TPK+MRDPDTG SKG+GFVSYD FEA+D AIECMHNQYLCNRQI VQ+AYKKD +GERHG QAERLLA+NNP + + +T+F+
Sbjct:    1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFS 209          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A7S3ZVH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVH1_9STRA)

HSP 1 Score: 339 bits (870), Expect = 5.730e-113
Identity = 155/211 (73.46%), Postives = 189/211 (89.57%), Query Frame = 1
Query:   13 IEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMR-MRPNTMFAENRDA 642
            +EQRNQDATCY GNLDE +T++L+WE+MLQAGPV NVH+P+DKV+G HQGYGFVEFRSEEDADY +K+MNM+KL+GKP+RVNKASQDR+ ++VGANLF+G L+G+VDEKLLYDTFSAFG I+ TPK+MRDPDTG SKG+GFVSYDSFEA+DLAIECMH Q+LCN+Q+ V +A+K+D+K ERHGSQAERLLAANNP   ++P+TMF     A
Sbjct:    6 VEQRNQDATCYVGNLDEQLTEELLWEMMLQAGPVSNVHLPRDKVTGSHQGYGFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDRRAVEVGANLFVGGLDGDVDEKLLYDTFSAFGTISETPKVMRDPDTGGSKGYGFVSYDSFEASDLAIECMHGQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPNNAVQPHTMFGTGAPA 216          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A0W8D7L6_PHYNI (Splicing factor 3B subunit 4 n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D7L6_PHYNI)

HSP 1 Score: 335 bits (858), Expect = 1.720e-111
Identity = 164/225 (72.89%), Postives = 189/225 (84.00%), Query Frame = 1
Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA------ENRDAPPMPP 657
            MS AIEQRNQDAT Y GNLD+ VT++L+WELMLQAG V NVHMP+DKV+G HQ YGFVEFR+EE A+Y +K++NMI+LYG+ +RV KAS DRK LDVGANLFIGNL+ EVDEKLLYDTFSAFG I  TPKIMRDPDT  SKGFGFVS+DSFEAADLAIECMH QYLCNRQ+VVQ+A+KKD+  ERHGS+AERLLA  NP +++P+TMFA         DAPP PP
Sbjct:    1 MSAAIEQRNQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVTGAHQNYGFVEFRTEECAEYAVKVLNMIQLYGRVIRVKKASNDRKNLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDTKASKGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQRNPNKLKPHTMFAFTAGAAPGMDAPPPPP 225          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A7S3UWY8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWY8_HETAK)

HSP 1 Score: 335 bits (859), Expect = 2.490e-111
Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 2
Query:  638 MHHQCLLCLVMDPHHPDLQWGSPLRRHLAWCPHHPACRRRHRGPCPRPQTCLHQDLRSLRRHGHHQICPHSLRSGCHLLHGCRHRCLRQGSGRPVCHQHPPGCHHQAAHRRRHPHRASLEALLHGASTGDHRPWGCPLPHRACRRRL 1078
            MHHQCLLCL MDPHHPDLQWGSPLRRHLAWCPHHPACRRRHRGPCPRPQTCLHQDLRSLRRHGHHQ CPHSLRSGCHLLHGCRHRCLRQGSGRPVCHQHPPGCHHQAAHRRRHPHRASLEALLHGASTGDHRPWGCPLPHRACRRRL
Sbjct:    1 MHHQCLLCLAMDPHHPDLQWGSPLRRHLAWCPHHPACRRRHRGPCPRPQTCLHQDLRSLRRHGHHQTCPHSLRSGCHLLHGCRHRCLRQGSGRPVCHQHPPGCHHQAAHRRRHPHRASLEALLHGASTGDHRPWGCPLPHRACRRRL 147          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A3F2RG69_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG69_9STRA)

HSP 1 Score: 333 bits (854), Expect = 8.530e-111
Identity = 160/223 (71.75%), Postives = 194/223 (87.00%), Query Frame = 1
Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA-ENRDAPPMPPMPG 666
            MS AIEQRNQDAT Y GNLD+ V+++L+WELMLQAG V NVHMP+DKV+G HQ YGFVEFR+EE ++Y +K++NMI+L+GK +RV KASQD+K LDVGANLF+GNL+ EVDEKLLYDTFSAFG I  TPK+MRDPDT  S+GFGFVS+DSFEAADLAIECM+ QYLCNRQ+VVQ+AYKKD++ ERHGS+AERLLA  NP +++P+T+FA  N+ APP PPM G
Sbjct:    1 MSAAIEQRNQDATVYVGNLDDRVSEELLWELMLQAGSVCNVHMPRDKVTGSHQNYGFVEFRTEECSEYAVKVLNMIQLFGKVIRVKKASQDKKNLDVGANLFLGNLDPEVDEKLLYDTFSAFGGIIETPKVMRDPDTKLSRGFGFVSFDSFEAADLAIECMNGQYLCNRQVVVQYAYKKDSQNERHGSEAERLLAQRNPNKLKPHTLFAFTNQGAPPPPPMGG 223          
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A484EDR7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDR7_BRELC)

HSP 1 Score: 333 bits (853), Expect = 8.580e-111
Identity = 159/216 (73.61%), Postives = 186/216 (86.11%), Query Frame = 1
Query:    1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFAENRDAPP 648
            MS  IEQRNQDAT Y GNLD+ VT++L+WELMLQAG V NVHMP+DKVSG HQ YGFVEFR+EE A+Y +K++NMI+LYG+ +RV KAS DRK+LDVGANLFIGNL+ EVDEKLLYDTFSAFG I  TPKIMRDPD+  SKGFGF+S+DSFEAADLAIECMH QYLCNRQ+VVQ+A+KKD+  ERHGS+AERLLA  NP +++P+TMFA    APP
Sbjct:    1 MSAGIEQRNQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVSGAHQNYGFVEFRAEECAEYAVKVLNMIQLYGRVIRVKKASNDRKSLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDSKASKGFGFISFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQTNPNKLKPHTMFAFTTGAPP 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPU5_9STRA1.720e-11879.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SH37_9STRA2.320e-11775.88Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F0YAQ8_AURAN2.260e-11677.94Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6H5KI11_9PHAE8.070e-11577.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT41_ECTSI5.240e-11377.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3ZVH1_9STRA5.730e-11373.46Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A0W8D7L6_PHYNI1.720e-11172.89Splicing factor 3B subunit 4 n=11 Tax=Peronosporac... [more]
A0A7S3UWY8_HETAK2.490e-11198.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3F2RG69_9STRA8.530e-11171.75Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A484EDR7_BRELC8.580e-11173.61Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig104contigH-akashiwo_Contig104:1332140..1333219 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog44056.XP_009037519.1
Preferred nameSF3B4
PFAMsRRM_1
Model size1080
Max annot lvl2759|Eukaryota
KEGG koko:K07951,ko:K12831
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005689,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0019219,GO:0019222,GO:0030532,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032991,GO:0033120,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0045935,GO:0046483,GO:0048024,GO:0048026,GO:0048518,GO:0048522,GO:0050684,GO:0050685,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1903311,GO:1903313,GO:1990904
Exons1
Evalue3.7e-117
EggNOG OGsKOG0131@1|root,KOG0131@2759|Eukaryota
DescriptionRNA splicing
Cds size1080
COG categoryS
BRITEko00000,ko00001,ko00002,ko03036,ko03041,ko04031,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387060.8982234-CDS-H-akashiwo_Contig104:1332139..13332191681387060.8982234-CDS-H-akashiwo_Contig104:1332139..1333219Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig104 1332140..1333219 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig104.49.1prot_H-akashiwo_Contig104.49.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig104 1332140..1333219 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig104.49.1

>prot_H-akashiwo_Contig104.49.1 ID=prot_H-akashiwo_Contig104.49.1|Name=mRNA_H-akashiwo_Contig104.49.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=360bp
MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSG
HHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGAN
LFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDS
FEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPM
RMRPNTMFAENRDAPPMPPMPGHGPPPPRPPMGLPPPPPSGMVPPPPSMP
PPPPGAVPPPPNMPPPRPPIAPPPRPPPNMPPQPPVGLPPPPRLPPPMPP
AGFGPPGMPPAPPRLPPPGSAPPPPPPPGQFGGPPPRGQYGGPPPMGMPP
APPRMPPPPF
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mRNA from alignment at H-akashiwo_Contig104:1332140..1333219+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig104.49.1 ID=mRNA_H-akashiwo_Contig104.49.1|Name=mRNA_H-akashiwo_Contig104.49.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1080bp|location=Sequence derived from alignment at H-akashiwo_Contig104:1332140..1333219+ (Heterosigma akashiwo CCMP452)
ATGTCGATAGCTATTGAGCAAAGGAATCAAGATGCCACTTGCTATTGCGG TAATCTGGACGAGATGGTGACTGATGACCTTATGTGGGAACTCATGCTGC AGGCCGGACCGGTAGTGAATGTCCATATGCCCAAGGACAAAGTTAGTGGT CATCACCAAGGGTATGGTTTCGTCGAATTTCGATCCGAAGAAGATGCAGA CTACTGCATAAAAATTATGAACATGATCAAGCTTTATGGCAAACCCATGA GAGTGAACAAGGCCAGCCAAGACAGGAAAACCCTCGATGTTGGCGCAAAT CTTTTCATTGGTAATCTGGAAGGAGAAGTCGATGAAAAACTTCTCTATGA CACATTTTCAGCCTTTGGTTTCATCACAACAACCCCTAAAATCATGCGGG ATCCCGACACAGGGAATTCTAAAGGCTTTGGCTTTGTTTCCTATGATAGT TTTGAGGCGGCAGACCTTGCCATCGAATGCATGCATAACCAGTACTTATG CAATCGACAAATTGTCGTGCAGTTTGCATATAAAAAGGATGCCAAGGGTG AAAGGCATGGGTCTCAAGCAGAACGTTTGCTTGCTGCAAACAACCCAATG AGAATGAGACCGAACACCATGTTTGCAGAGAATCGGGATGCACCACCAAT GCCTCCTATGCCTGGTCATGGACCCCCACCACCCAGACCTCCAATGGGGC TCCCCCCTCCGCCGCCATCTGGCATGGTGCCCCCACCACCCAGCATGCCG CCGCCGCCACCGGGGGCCGTGCCCCCGCCCCCAAACATGCCTCCACCAAG ACCTCCGATCGCTCCGCCGCCACGGCCACCACCAAATATGCCCCCACAGC CTCCGGTCGGGCTGCCACCTCCTCCACGGCTGCCGCCACCGATGCCTCCG GCAGGGTTCGGGCCGCCCGGTATGCCACCAGCACCCCCCAGGCTGCCACC ACCAGGCAGCGCACCGCCGCCGCCACCCCCACCGGGCCAGTTTGGAGGCC CTCCTCCACGGGGCCAGTACGGGGGACCACCGCCCATGGGGATGCCCCCT GCCCCACCGCGCATGCCGCCGCCGCCTTTC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig104:1332140..1333219+

>mRNA_H-akashiwo_Contig104.49.1 ID=mRNA_H-akashiwo_Contig104.49.1|Name=mRNA_H-akashiwo_Contig104.49.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1080bp|location=Sequence derived from alignment at H-akashiwo_Contig104:1332140..1333219+ (Heterosigma akashiwo CCMP452)
ATGTCGATAGCTATTGAGCAAAGGAATCAAGATGCCACTTGCTATTGCGG
TAATCTGGACGAGATGGTGACTGATGACCTTATGTGGGAACTCATGCTGC
AGGCCGGACCGGTAGTGAATGTCCATATGCCCAAGGACAAAGTTAGTGGT
CATCACCAAGGGTATGGTTTCGTCGAATTTCGATCCGAAGAAGATGCAGA
CTACTGCATAAAAATTATGAACATGATCAAGCTTTATGGCAAACCCATGA
GAGTGAACAAGGCCAGCCAAGACAGGAAAACCCTCGATGTTGGCGCAAAT
CTTTTCATTGGTAATCTGGAAGGAGAAGTCGATGAAAAACTTCTCTATGA
CACATTTTCAGCCTTTGGTTTCATCACAACAACCCCTAAAATCATGCGGG
ATCCCGACACAGGGAATTCTAAAGGCTTTGGCTTTGTTTCCTATGATAGT
TTTGAGGCGGCAGACCTTGCCATCGAATGCATGCATAACCAGTACTTATG
CAATCGACAAATTGTCGTGCAGTTTGCATATAAAAAGGATGCCAAGGGTG
AAAGGCATGGGTCTCAAGCAGAACGTTTGCTTGCTGCAAACAACCCAATG
AGAATGAGACCGAACACCATGTTTGCAGAGAATCGGGATGCACCACCAAT
GCCTCCTATGCCTGGTCATGGACCCCCACCACCCAGACCTCCAATGGGGC
TCCCCCCTCCGCCGCCATCTGGCATGGTGCCCCCACCACCCAGCATGCCG
CCGCCGCCACCGGGGGCCGTGCCCCCGCCCCCAAACATGCCTCCACCAAG
ACCTCCGATCGCTCCGCCGCCACGGCCACCACCAAATATGCCCCCACAGC
CTCCGGTCGGGCTGCCACCTCCTCCACGGCTGCCGCCACCGATGCCTCCG
GCAGGGTTCGGGCCGCCCGGTATGCCACCAGCACCCCCCAGGCTGCCACC
ACCAGGCAGCGCACCGCCGCCGCCACCCCCACCGGGCCAGTTTGGAGGCC
CTCCTCCACGGGGCCAGTACGGGGGACCACCGCCCATGGGGATGCCCCCT
GCCCCACCGCGCATGCCGCCGCCGCCTTTC
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