mRNA_H-akashiwo_Contig104.49.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A835YPU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU5_9STRA) HSP 1 Score: 359 bits (921), Expect = 1.720e-118 Identity = 167/209 (79.90%), Postives = 192/209 (91.87%), Query Frame = 1 Query: 1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 627 MS AIEQRNQDATCYCGNLDE T++L+WELM+QAGPVVNVHMPKDKV+ HQGYGFVEFRSEEDA+Y IKI+NM+KL+GKP+RVNKAS DRK DVGANLFIG L+ EVDEKLLYDTFSAFGFIT TPK+MRDP+TG SKG+GFVSYD FEA+DLAIECM+ Q+LCNRQIVVQ+A+K+D+ GERHGS AERLLAANNP+R++P+TMFA Sbjct: 1 MSAAIEQRNQDATCYCGNLDEAATEELLWELMIQAGPVVNVHMPKDKVTNTHQGYGFVEFRSEEDAEYAIKILNMVKLFGKPLRVNKASSDRKAQDVGANLFIGQLDPEVDEKLLYDTFSAFGFITNTPKVMRDPETGASKGYGFVSYDGFEASDLAIECMNGQFLCNRQIVVQYAFKRDSHGERHGSLAERLLAANNPLRLKPHTMFA 209
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A7S2SH37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH37_9STRA) HSP 1 Score: 350 bits (897), Expect = 2.320e-117 Identity = 173/228 (75.88%), Postives = 198/228 (86.84%), Query Frame = 1 Query: 1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPM--RMRPNTMFAENRDAPPMPPMPGHGPP 678 MS AIEQRNQDATCYCGNLD+ V ++L+WELMLQAGPVV++HMPKDKV+ HQG+GFVEFRSEEDADY IKIMNM+KL+ KP+RVNKASQDRKT+DVGANLFIGNL+ +VDEKLLYDTFSAFG +T PK+MRDPDTG SKGFGFVSYDSFEAADLAIECM+ Q+L NR I VQFA+K+D++GERHGSQAER+LAANNP+ RM P+TMFA PP P G G P Sbjct: 1 MSAAIEQRNQDATCYCGNLDDQVEEELLWELMLQAGPVVSLHMPKDKVTNSHQGFGFVEFRSEEDADYAIKIMNMVKLFDKPIRVNKASQDRKTMDVGANLFIGNLDAQVDEKLLYDTFSAFGGLTDQPKVMRDPDTGLSKGFGFVSYDSFEAADLAIECMNGQFLSNRAIQVQFAFKRDSQGERHGSQAERMLAANNPLARRMAPHTMFAAG---PPGMPSGGMGGP 225
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: F0YAQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ8_AURAN) HSP 1 Score: 350 bits (898), Expect = 2.260e-116 Identity = 159/204 (77.94%), Postives = 189/204 (92.65%), Query Frame = 1 Query: 13 IEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMF 624 +EQRNQDATCY GNLDE +T++L+WE+MLQAGP+ NVH+P+DKV+G HQGYGFVEFRSEEDADY +K+MNM+KL+GKP+RVNKASQD+KTL+VGANLF+G L+ +VDEKLLYDTFSAFG IT TPKIMRDPDTGNSKGFGFVSYDSFEA+DLAIECMHNQ+LCN+Q+ V +A+K+D+K ERHGSQAERLLAANNPM +P+ MF Sbjct: 6 VEQRNQDATCYVGNLDEQLTEELLWEMMLQAGPIGNVHLPRDKVTGSHQGYGFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDKKTLEVGANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPMSAKPHAMF 209
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A6H5KI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI11_9PHAE) HSP 1 Score: 348 bits (892), Expect = 8.070e-115 Identity = 161/209 (77.03%), Postives = 187/209 (89.47%), Query Frame = 1 Query: 1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 627 MS +IEQRNQDATCY GNLD VT+ L+WELM+QAGPV NVHMPKDK++G HQG+GFVEFRSE+DA+Y IKIMNM+KL+GKP+RVNKASQDRK DVGANLFIG L+ +VDEK+LYDTFSAFGFIT TPK+MRDPDTG SKG+GFVSYD FEA+D AIECMHNQYLCNRQI VQ+AYKKD +GERHG QAERLLA+NNP + + +T+F+ Sbjct: 1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFS 209
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: D8LT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT41_ECTSI) HSP 1 Score: 348 bits (892), Expect = 5.240e-113 Identity = 161/209 (77.03%), Postives = 187/209 (89.47%), Query Frame = 1 Query: 1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA 627 MS +IEQRNQDATCY GNLD VT+ L+WELM+QAGPV NVHMPKDK++G HQG+GFVEFRSE+DA+Y IKIMNM+KL+GKP+RVNKASQDRK DVGANLFIG L+ +VDEK+LYDTFSAFGFIT TPK+MRDPDTG SKG+GFVSYD FEA+D AIECMHNQYLCNRQI VQ+AYKKD +GERHG QAERLLA+NNP + + +T+F+ Sbjct: 1 MSASIEQRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFS 209
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A7S3ZVH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVH1_9STRA) HSP 1 Score: 339 bits (870), Expect = 5.730e-113 Identity = 155/211 (73.46%), Postives = 189/211 (89.57%), Query Frame = 1 Query: 13 IEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMR-MRPNTMFAENRDA 642 +EQRNQDATCY GNLDE +T++L+WE+MLQAGPV NVH+P+DKV+G HQGYGFVEFRSEEDADY +K+MNM+KL+GKP+RVNKASQDR+ ++VGANLF+G L+G+VDEKLLYDTFSAFG I+ TPK+MRDPDTG SKG+GFVSYDSFEA+DLAIECMH Q+LCN+Q+ V +A+K+D+K ERHGSQAERLLAANNP ++P+TMF A Sbjct: 6 VEQRNQDATCYVGNLDEQLTEELLWEMMLQAGPVSNVHLPRDKVTGSHQGYGFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDRRAVEVGANLFVGGLDGDVDEKLLYDTFSAFGTISETPKVMRDPDTGGSKGYGFVSYDSFEASDLAIECMHGQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPNNAVQPHTMFGTGAPA 216
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A0W8D7L6_PHYNI (Splicing factor 3B subunit 4 n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D7L6_PHYNI) HSP 1 Score: 335 bits (858), Expect = 1.720e-111 Identity = 164/225 (72.89%), Postives = 189/225 (84.00%), Query Frame = 1 Query: 1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA------ENRDAPPMPP 657 MS AIEQRNQDAT Y GNLD+ VT++L+WELMLQAG V NVHMP+DKV+G HQ YGFVEFR+EE A+Y +K++NMI+LYG+ +RV KAS DRK LDVGANLFIGNL+ EVDEKLLYDTFSAFG I TPKIMRDPDT SKGFGFVS+DSFEAADLAIECMH QYLCNRQ+VVQ+A+KKD+ ERHGS+AERLLA NP +++P+TMFA DAPP PP Sbjct: 1 MSAAIEQRNQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVTGAHQNYGFVEFRTEECAEYAVKVLNMIQLYGRVIRVKKASNDRKNLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDTKASKGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQRNPNKLKPHTMFAFTAGAAPGMDAPPPPP 225
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A7S3UWY8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWY8_HETAK) HSP 1 Score: 335 bits (859), Expect = 2.490e-111 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 2 Query: 638 MHHQCLLCLVMDPHHPDLQWGSPLRRHLAWCPHHPACRRRHRGPCPRPQTCLHQDLRSLRRHGHHQICPHSLRSGCHLLHGCRHRCLRQGSGRPVCHQHPPGCHHQAAHRRRHPHRASLEALLHGASTGDHRPWGCPLPHRACRRRL 1078 MHHQCLLCL MDPHHPDLQWGSPLRRHLAWCPHHPACRRRHRGPCPRPQTCLHQDLRSLRRHGHHQ CPHSLRSGCHLLHGCRHRCLRQGSGRPVCHQHPPGCHHQAAHRRRHPHRASLEALLHGASTGDHRPWGCPLPHRACRRRL Sbjct: 1 MHHQCLLCLAMDPHHPDLQWGSPLRRHLAWCPHHPACRRRHRGPCPRPQTCLHQDLRSLRRHGHHQTCPHSLRSGCHLLHGCRHRCLRQGSGRPVCHQHPPGCHHQAAHRRRHPHRASLEALLHGASTGDHRPWGCPLPHRACRRRL 147
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A3F2RG69_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG69_9STRA) HSP 1 Score: 333 bits (854), Expect = 8.530e-111 Identity = 160/223 (71.75%), Postives = 194/223 (87.00%), Query Frame = 1 Query: 1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFA-ENRDAPPMPPMPG 666 MS AIEQRNQDAT Y GNLD+ V+++L+WELMLQAG V NVHMP+DKV+G HQ YGFVEFR+EE ++Y +K++NMI+L+GK +RV KASQD+K LDVGANLF+GNL+ EVDEKLLYDTFSAFG I TPK+MRDPDT S+GFGFVS+DSFEAADLAIECM+ QYLCNRQ+VVQ+AYKKD++ ERHGS+AERLLA NP +++P+T+FA N+ APP PPM G Sbjct: 1 MSAAIEQRNQDATVYVGNLDDRVSEELLWELMLQAGSVCNVHMPRDKVTGSHQNYGFVEFRTEECSEYAVKVLNMIQLFGKVIRVKKASQDKKNLDVGANLFLGNLDPEVDEKLLYDTFSAFGGIIETPKVMRDPDTKLSRGFGFVSFDSFEAADLAIECMNGQYLCNRQVVVQYAYKKDSQNERHGSEAERLLAQRNPNKLKPHTLFAFTNQGAPPPPPMGG 223
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Match: A0A484EDR7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDR7_BRELC) HSP 1 Score: 333 bits (853), Expect = 8.580e-111 Identity = 159/216 (73.61%), Postives = 186/216 (86.11%), Query Frame = 1 Query: 1 MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGHHQGYGFVEFRSEEDADYCIKIMNMIKLYGKPMRVNKASQDRKTLDVGANLFIGNLEGEVDEKLLYDTFSAFGFITTTPKIMRDPDTGNSKGFGFVSYDSFEAADLAIECMHNQYLCNRQIVVQFAYKKDAKGERHGSQAERLLAANNPMRMRPNTMFAENRDAPP 648 MS IEQRNQDAT Y GNLD+ VT++L+WELMLQAG V NVHMP+DKVSG HQ YGFVEFR+EE A+Y +K++NMI+LYG+ +RV KAS DRK+LDVGANLFIGNL+ EVDEKLLYDTFSAFG I TPKIMRDPD+ SKGFGF+S+DSFEAADLAIECMH QYLCNRQ+VVQ+A+KKD+ ERHGS+AERLLA NP +++P+TMFA APP Sbjct: 1 MSAGIEQRNQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVSGAHQNYGFVEFRAEECAEYAVKVLNMIQLYGRVIRVKKASNDRKSLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDSKASKGFGFISFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQTNPNKLKPHTMFAFTTGAPP 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig104.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig104.49.1 >prot_H-akashiwo_Contig104.49.1 ID=prot_H-akashiwo_Contig104.49.1|Name=mRNA_H-akashiwo_Contig104.49.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=360bp MSIAIEQRNQDATCYCGNLDEMVTDDLMWELMLQAGPVVNVHMPKDKVSGback to top mRNA from alignment at H-akashiwo_Contig104:1332140..1333219+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig104.49.1 ID=mRNA_H-akashiwo_Contig104.49.1|Name=mRNA_H-akashiwo_Contig104.49.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1080bp|location=Sequence derived from alignment at H-akashiwo_Contig104:1332140..1333219+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig104:1332140..1333219+ >mRNA_H-akashiwo_Contig104.49.1 ID=mRNA_H-akashiwo_Contig104.49.1|Name=mRNA_H-akashiwo_Contig104.49.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1080bp|location=Sequence derived from alignment at H-akashiwo_Contig104:1332140..1333219+ (Heterosigma akashiwo CCMP452)back to top |