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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 348 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 207 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681387060.696931-UTR-H-akashiwo_Contig104:1156847..1156986 | 1681387060.696931-UTR-H-akashiwo_Contig104:1156847..1156986 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig104 1156848..1156986 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681387060.7083633-CDS-H-akashiwo_Contig104:1156986..1157097 | 1681387060.7083633-CDS-H-akashiwo_Contig104:1156986..1157097 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig104 1156987..1157097 - |
| 1681387060.7160351-CDS-H-akashiwo_Contig104:1165927..1166023 | 1681387060.7160351-CDS-H-akashiwo_Contig104:1165927..1166023 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig104 1165928..1166023 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig104.42.1 >prot_H-akashiwo_Contig104.42.1 ID=prot_H-akashiwo_Contig104.42.1|Name=mRNA_H-akashiwo_Contig104.42.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=69bp
AAALTGDEGDARRLGPERIFAVENYRQGKYLQDPVLDLSVLEFLDNVVES
ANYFVSAQYKPQGSCLVS* back to topmRNA from alignment at H-akashiwo_Contig104:1156848..1166023- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig104.42.1 ID=mRNA_H-akashiwo_Contig104.42.1|Name=mRNA_H-akashiwo_Contig104.42.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=9176bp|location=Sequence derived from alignment at H-akashiwo_Contig104:1156848..1166023- (Heterosigma akashiwo CCMP452)
GCGGCCGCGCTCACCGGCGACGAGGGGGACGCCCGCCGGCTCGGCCCCGA
GCGGATCTTCGCGGTGGAGAACTACCGTCAGGGGAAGTATCTCCAGGTGG
GCCGGCGCAACGAACAGCCCTGCGGGCGGTCCTCGAGTTGGCCGTGTGTC
TGGGAGGGATTGTTGCTTGCGGCTCCCGTCATCGTTTAGAATTTTGCTAA
TTTTCCAATAGGGATTTTGGCTGTTTTGGGGTAAATGAATACATTTCTTC
GAAAGAAAAGGTAGGAGGGCACAATATCTCCTTGGTCTGTGGCTGGTTTC
AGTTTGAACAAGCTGGAGAAACAACAGGATGAAGGGTGCACAACTGGTGG
TTTCGCCGCTGCTGAGTTTTTCTTTCTGCATTCTGTACGAAGGTCAGAGC
GTCGGCATGCGAAGAATTTTTAGCCCAAACTATTGCCTTAGGAATGAACT
ATCTTTGTTTTGGGAATATTATATTTATGAATGAGAATTGAGAAAGAGAA
TAATCCGTAAGGAGGATTCAGCCATTTGAGCTATCTACTATACAAACGGT
CTGTCTATAATTTGCAAGCAGTCTCATCTAGCAGAATAACAACAAGAAGG
AATAAGTATCAATAAAAAACACGGCAGGAAAAATAATAAAAGAACCAATC
ATCAGTCAACAATCAATCAAAATGAAAAGAAAATCGTTCATCAAAAAAAA
GATAACATTACAAAAGCCTAAAGAGTCAACTACATAACAAAAGCCTAAAG
AGTCAACTACAAAATAAATACATCGGAAATCAGCAATAGGAAATGAAATG
AACCTTCTACCTTGAAAGATACAAATGAATCACTGTCATTTCTGGAAGAA
TCCTGTCAGAGTTTGTTTCTGTCCAATACATCGTCCCCAAACTCCCCCAA
TGATGACCAGCCAGCTTTAGTCCAGATGGTTATCATTCCTCCAGTCACTG
ATCATTCTAAAAAATATAGGAAGCTAAAACCTTCAAGAAAAGTGCTCCCT
CAATGTTGTAGTCTTCTGTCACTATACTACATTAGTTGTGATGGTGCACT
CGAGCGGTGTATGGCTCAAGCCGGCTTTCGTGACAAACCTGCTGGCAAAC
CTAAATCTATTTTTATCAAGACTGTGGCTCCTCCTTGATGATGAGTGTGC
AAAACTCTAGAAACGATTCTGCCACCCATTGTTGAATGAGAGTGCAAGTA
AGCGTTTGGTAAAGAACCTTACTTCTCTACAAATGTGCAAAGCTCTCAAG
AACGACTCGGCACATTTGTGGAAACAAAGTTCAGCACTTATATTTGCAGT
CAAGCTTTTTCTATTCAAATAAAGTGTCAGTGATCTTCTTCTTCTACTTC
AGAAATCTTTCTTATGATGATGATGATGTAAGTCAGCATCAAAGCATGAT
GAACAAGCAGATGTGCAAAGCTCTCAAGAACGACTCGGCACATCAGCTGT
ATAGAAAGAATTGTGTGAACAAAAAGAATAATAATCATCTCCACTTATAA
AACTACTATAGTACTTGCTGCATCAGCAAAAGGCTTTCCGCCGTCCTTCT
AGGACAAGGAATCTTCCACTTTGTGGATGGCAGTCTAAAGCTGCAGTTTG
ACATATCCATAAGGGTCTTGAAAAATTAATGGTTATGGTTTAGCCCCGAC
GTGAACTCTACGCATGAACCACGCTCTGGCGGTTTACACTCGATCTCAAA
CAATGGCTGACCTGGACAATGAGGACTTTGACACCAAACAGCGCGGCGAT
GGGCCGGTCTTTGACCAAAACCGTGCGGCGAAATGGTTGAAAGCTTTCAC
GCTGCATCTGAGAAAGATTGGCTATTACAGAATTGGCACTGGGGAGGATC
GTCCTTCCACCGATACCCCGCCTCTGGCAGCATATCGACAGGAAAAAAGG
ACATGTTCTGTGGTCAAGTCTTGACTTCGCTGGGATCTTCTGAGACTGTT
GTTCTTCCAGATACTGTGGATCGCTTTGACCCTGTGGCTCTGTGGACTGC
GGTCAATGCCTATGTGACTGGCCGAGCTGGATCTGGCAGCGAGACTGCAA
ACGACATGGCCGAGCTCCTTATTTACCAAGTCTGAAGCTTGGCTCTGATG
TGCACTTGCACTTTGTGGCTCTACTGGAGATACGGAATCGCATTGTGGAC
AATGATGGTTCTACCATCATCCCTGAGAAGCTGATGGTGGTGATTGTGCT
GGTTTCGCTGCCTAGAGGGCCTGATTCCTACTTGAGCCTGTGATCGTTTC
ATTGCTACTGGAGCTGTCCAAGCCTAGAGACGCCACTGTCACTTTGGCGT
TCGTGATTGCTCAGCTGGAACAGTGCGGCGTGATTACCGTCGGGCAATGC
TGACGCTCCTGCCGTGGCCTTGATGGCTCGTGGTGGTCGCTACCAACGTG
GCCGTGCTCCTACTGGTCGTCAGCCCCACAAGACGGGTTCCCTACGACTT
GTGGCTACTGCTCTGATCCACTTCACGACATTGTGCAGTGTGACCCGGCT
GTTTCGGCGCATGCTGGATGCTCGTAGCCTAATGGTGGTCGCGATGACAG
AAGGCAGCAGCGGGCGATGCTTGCTGCTGAAGAAGGAGCGACACCGACGG
CGAGGTCCTGCCGCTACTGGCGCTGCTGCACTGCTTTCTGTGCAGCCTCC
CCTCTTCCTGTAAAGGTTCTGTGAAAGCAGATACCTATTTCAAGGAGAAC
CTGGTGCCCGAGCAAGGACTTCTGGTAGCTCCGGCTGCTGGCTCTGGTGG
GCCTTTCTCTGGCTCTGGTGGGCATATCTCAATTTGGTGGGCAACCAAGA
ATGGTGGGCAATGTACTTACTGGCTTCTTGGCTTTCCCCATCCACCACTC
TCCGTGTGGTGGGCCATTAGTTGTGATGGTGCACTCGGCGGTGTATGGCT
CAAGCCGGCTTCGTGACAAACCTGCTGGCAAACCTAAATCTATTTTTTAT
CAAGACTGTGGCTCCTCCTTGATGATGAGTGTGCAAAACTCTCTAGAAAC
GATTCTGCCACCCATTGTTGAATGAGAGTGCAAGTAAGCGTTTGGTAAAG
AACCCACTTCTCTACAAATGTGCAAAGCTCTCAAGAACGACTCGGCACAT
TTGTGGAAACAAAGTTCAGCACTTATATTTGCAGTCAAGCTTTTTCTATT
CAAATAAAGTGTCAGTGATCTTCTTCTTCTACTTCAGAAATCTTTCTTAT
GATGATGATGATGTAAGTCAGCATCAAAGCATGATGAACAAGCAGATGTG
CAAAGCTCTCAAGAACGACTCGGCACATCAGCTGTATAGAAAGAATTATG
TGAACAAAAAGAATAATAATCATCTCCACTTATAAAACTACTATAGTACT
TGCTGCATCAGCAAAAAAGGCTTTCCGCCGTCCTTCTAGGACAAGGAATC
TTCCACTTTGTGGATGGCAGTCTAAAGCTGCAGTTTGACATATCCATAAG
GGTCTTGAAAAATTAATGTACTATAAAGTACAGTCTTCAAATGTACAAGG
GTCTTGTGCTTTCATCCATCATCGATGAATGTTGAAAATGACTCCCTGAA
AACATCAACAGGTTGATCCATGTCCTTTGATGTTGTTATAACAATTCAAA
TACTCTGCCATACTGCCTAGTAGGTTGAGATCAATTCAACACTAACATCT
TGAGCAAGATATGGTATTCATTGGGTCTTGTGTCTGCTACCATCATTGAT
GGGTACCGCCTGACGACTCCCATAAATATTTATAGCTTGATCATACAGCT
AAAATATTTTCACATCAGTATGATAAGCTGCCATGAGTACCTAGAAGATA
TTGTGATCAACTTCAAATCTTCATCATGAGTAAAACTCACAGTCTCCCCA
AGCATCTGTTTTCCCCACAGAGTCACCCACCTATATCTCCCCCCAGAACC
AGCAAAAATCAATCCACTATTTTGCAGAAAGCAAAAAGTAATAATGTTCT
TCTCGTTGGATAAAAAGTACCCCAATGAGTTCCCAGTAGTAAATACAAAC
CTCCTGGCCTCTCCTCAAAAGAAATGTGTTGCAACACAAAATATCTAGCT
CCTTGGCTCTGCCCACCATCACCAAACAAAAAAAAATGCTGGTTCTGAAA
AATCATCATCATGTTATCATCCTCCCCCGATGAATAACATCTTTACAAGT
AGAAAACAATCATCTGCTGCCATCTCTGCCATGATCAGTATTAACAGCGT
CATCCATCAGCAAGAACATCACCATCTTTAGAAAAGCCCAAGATCTTCAT
TGTTGTAATCACCAGCCACAAGCTTCACTGTCATGCTCTTTTCCAGATTC
TCCTCGTCGACTTTTGAAAAACGATCGGTTCAACAAGGTCGCATCAGTGT
TGATCAAATCACAGGAACATCACGATGAAATAGAGTATCAGCGCCAATGA
ACATCATGCATATATAGCCCCAGAACCATCCGTGCGATTGAGATCTTCGC
CAGAATCAATTTCTTCTGCCTCGCGAACAATAAGAAAGTCATCTTCATCT
TCGCTGTAATCCACTTTTGTCATTTTTCGGACTTCGCCCACTAGCAGCGG
CGATCCCTTGGACCAGCGTCCACCTCGATTAGTTTCGATGGTCAAACAAC
AGATGTTCATTATTGCACAGAGACTGATAAGAACATTTTTTACAATCCAA
CAGATATTCATAGGACTAAATATTTCGATCAGAGTCTGATCTTCTTCAGT
ATCCCAGGCTGCTCTAGATAATCCAGCTAGGGAGTATATCAATGAAAGTC
TACCTGAAAACATCACGATCACGACGGCGTGCTGCTCATGCTCATGGACA
ACAATAAAACAACTCTTTGTAACAGATGCTCGATAACGTTTTAGTTGCCA
TCTCAGAAAGAACGCTATCAGTATATATTTCGATACTGGATTCTCCAGCG
CTCCAACATCTTCATCATCAGTAGCCATCCAAGAAATCATTCCATATATA
GCTCAGAAAGGTATGAAACAACAGTGCTGATAACGTTTTAGGCCTAACTA
TTGCCTTAGGAATGAATTATCTTTGTTTTGGGAATATTATATTTATGAAT
AACTCCCACTTCTTTTTTAGAATTATTAGAAAAAAATTCGAGTCATACTA
GAATGCTAATAGAGGGCCAGGTCTATGGACCGATGGCTAGGGGGCTACAC
CACTACCCACATTATGGGGCAGGGGAGCGGTGTTTGGGGGGCCAATGCCA
GAGGGGTGCACATATGCACCATCATGGGGGACTGGGGTTGATACGGGTGC
GATGTCAGCATGACGCTCAGGGGCGTGAGTGTCTGAGCTTGCGTGACGTG
CCATACGAGCATTGGCTACCTGTAAACTACACGCACTGAGCTTATCTGAT
AGGGGGTCGGCTCGAACACAGCGACAGCTTACACAGAAGAAGTGGGGGTT
AGAGGGGGCTGGGGGGGGGGATGAGGCCTAGACAAAAAGCTGGCTTTAGG
GATTCTTCGCCTGCAACAGCAGCCATCCAGCCTGGGACATGGCGGGCCTA
TGACACAGGCAGGATATCGGGATATGAACAAGGGCACGAAACGAAGAATC
GCGAGCAAAAGGCTGGGGCAGTCTGGCGCACTCTGGGGAGCTCCATGACG
CCAGGGAATTTCGGGCCAGGGGAACACATTGGGAACAGTCATGGGGCAGT
TTTAAGCCAACTGCGCCCTGGCGAAGGGGGGTCGCACCTTTACCTGGGTG
GTCAGAGGAGGACCTTCTTCGCATTCTGCTTCCGACGGACCACCAGCAGC
AGCAGGACAACAACCACCTGCTGCTCAACAGGAGAAGGAGAAGAAGGCAA
CGACCAGCCAGCAGGGTTCTAACGGGGAAACTATTCTTGTCCAAAACACA
GATTAAATGCTCCACAGAGGCTTCCAATTGGTGGGGGGAGGGCTTAGCAA
AACGGACACCGGGGAACGGGGGGGCCGATTGACCAAGATAGACAGGTTCT
GGTCAATGGGATAGACTTAAAATGCGACTTTTTATGGCGTGCACAACACC
GGGAGCAGCAGCGAGGAGGAGGGGGGAGAAGAGAAGAGGCAAGATTGACA
CAACAACAGTCTTCCTCTTTCTGTTTGAGTACTCACCTGTTGCTGCATCG
CCATCGCGAGTGTAGTAGCTAGCAGCACTGAATTGGTTTGGGCAACCTTG
AGAATATGGGACATCGAGGGCAAGGGGGGGTCATCTGAGGGGTCGAGTGG
GGGATACAGATTCTGAATCGAGCATGAAGAGACTGCATCGAGCTCCGAGG
ACGACTCAACCAGAGCAGTCGGGCGGCGAGGCCGGGGAAGCTATATGCTG
CAAGAGACAGTGGAGGATGGGTTTACGCTGGTCAGCACGAGGGGAAGAAA
AGAGGCGGGCAAAGCGAGAATTGCAGAAAGAGGAGGAAAAGAAAAGAGTG
GAGCTGGCAGCTTAAGGCGAGGGAGGAGGAAAAGCGAGACCGCGAGATCC
AAAGTAAGCTATGGGCAGCCAACCAGCAATCACCAAACTAGGGCCAGGGC
TGCGAGAGAGCGCCAGGAAGCTCAGGCCAAGGCGGCGGAAGGAAGAGCGC
AAAGACCTGTGGCCCAGAGAGGTGGTGGGGCTGCTGCCTTGGAGGGAGGG
AGGCAGGGCGGCTAGAGGTGGGAGAGGGAGGGGTGGGGGCCCGGGGAGGG
CAATGGGGACCTGCCGGAGGTGGGCGGAGCAAAGGAGGACCTGCCGAGGG
TGCAGACAAGCCCAGCCAGGGGCTTGGGGGTTCCAGGAGCGCGGAGGCAG
AGCAAGAGCACCTGGACAGTGATAGGGAACAGCGCTTTGAGGAGGCTTTG
AGGAAGATGGAGGAGCATCAAGCTTGTCGGAAGAAGGAAGGAGCATCTTT
GACAAACAGATAGTGAGAGGGAGAAGAAAGGTGTGCAGTGGGATCCAGGG
TAGTCTTTTTCTTTATTTTTCTTTATCTTTCTGAAGTTTTGGTGATGAAC
CAAGGAGTAAGCAGTGGGAGTTAGAAGTGGCAGGGACCACATGTGGAGGC
CGGGGCTTCGGTCCTTGTAGTTATCCAAGAGGTGGACTTAAAATAAAACA
AAATCATCATCATCATCATTATATTTATGAATAAGAATTGAGAGTGAGAA
TGAATCCGTAAGGAGGATTAAGCCACTTGAGCTATATCTAGTATACAAAC
GATCTATCTAATTTACAAGCAGCCTCGTCTATAAGTAGCAGAATAACAAC
AAGGAGAAATAAATATCAATGAAAAACACGGCAGGAAAAAAAAAGAACCA
ATTATCAGTCAAGAATCAATCAAAAAGAAAATAAAATCATTCATCAAAAA
AATAACATTGCAAAAGCCTAAAAATGCAACTACATAACAAAAGCCTTAAA
CTAAAAAATAAATCCATCGGAAATCAACGCTAGGAAATAAAATAAAGCTT
CTACCTTGAAAGATACAAATGAATCACTGTCATTTCTGGAAGAATCCTGT
CAGAGTTTTGTTTCGGTCCAATACGTCATCCCAAAAGAATTTCATGCCGT
ATACTATGATGTCCTTGCACCCGGCCTGTTCTTTTTTTCTCTCTTTTAGC
TTCCAACTACTACTCTTCTTCGCTAAACAAACATTGTTTTGAGGAGAAGA
AGAAGCACGAGAGGTATAGACATAGAAGAAGTGCAGACATGCTATTTATA
CCAAGGAACTTCTCCGATGAGTTGCCAGAATTTGGCTATATGTTGTACAA
TGGCAGTGAAGTGTGCTACCGTGTAGTGGGGGGTGGCATTGTGTAATGAA
TAAACGTAGATAAAAAAAAATAAAAATAAAAAACAACGTATACGACGTGA
AATTCTTCGCAGGCCGACGCTCTGGCCCTTCGTACTGCACTTTTTTTTAC
ATTATTTCAGCATTTAAGTGACAACATTTGTTTATTGTGACTTTTGCTAC
CTCTGTGCCCATTATCGCCCCATGTGTCTTCAGTTTTCTTCTGAGAGGAA
GGTATCCTTGTATAACATGTGCTGCTGTTGGAGAGCGGGGTGCTTGAGAG
TGTTCCATGTGCCCGCGATTCTAGCTCTACAGTATCTTTTGAAAGCTACC
ACGGGGGCTTGCGCTGGCGGTGAACTCGTTATATTGATAGAAGGTTCTGT
GAGCGTGCTGCAGAAAGTCAAGCTGATCTCCGAGGCTTGGGGGCAGAGAG
GCCATCAAACTCTGGTGGTATCAAGTTGCAAGCCTTACCACTCCCTTGCC
CTTCCAGCAGCTTGCAGGTGAATCCAATGGCAACCTGTTCTCTTCTACTT
TCCAATGAAGGGGTAATAGCACTTCATTCCGATTCACACCACTACCCATT
TTCATTTAATTTAAGTTCTTACTGACAAGGAGGTGTGCTGATGAAGGCCG
GCCACCAGCTTTGGCTGATAGTATGCCAGAAACACGGTTGTCCGCATCAA
ATCAAGGAATGATTTAAAAATCTTTGACACATATATTGCTTTGGCAATGT
GGTGCTACACTCGTTGATGATAGCAGCGACTTTTACTGTTGAACCCAATC
CTTCGCAATGATTGCCCCAAAGAAAATCTCAGTATGTTTTGACATTTCCA
AGTTCCAGCCCCTTTATTGTGGCAGGAAACTTTTTCGTTTTCTTGAAAAA
AAATGTTTTTAAAAAATGAATTTGTGCGAAACAACAGCGGCAAACAACAT
GGAACTTTGTCAACATATATAAAGTAGGAACTCTGATGACATTCTCTACC
TTCAGGCACGAAGGCTGGTGTGTGTGTGCGTATGTGGCTAAGTTGGGGGG
GGGGGAGGCTTCCAGCACAGAAGGGGCATCAATCAACCCGCACACACAAC
CTGTCACCCCTTTGCCAAAAATGAGGATATGTATAATCCATACTGCAGGC
ATTTCATCGATGATGTTTTATTGCTGCCGTTTGTTGTGCCTGCTGCAACC
ATGCTGCTGCTCTCCCCTTTCTTCAGGATCCCGTGCTTGACCTGTCAGTT
TTGGAGTTCCTCGATAACGTGGTAGAATCCGCTAACTATTTTGTGTCAGC
CCAGTACAAACCGCAAGGAAGTTGTTTGGTTTCATGATTACCATTGTGGT
TGCACTTCTTTTCTGGTGGTAGTGCAACCACGTTTGTGGCAGTGCAGGAA
CAATACTGGTAGATTTATGTGAGTTTGCATTTTCTGCTGATAGCAACACA
ACAGAATTGTGATGTATACATCGTCA back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig104:1156848..1166023- >mRNA_H-akashiwo_Contig104.42.1 ID=mRNA_H-akashiwo_Contig104.42.1|Name=mRNA_H-akashiwo_Contig104.42.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=207bp|location=Sequence derived from alignment at H-akashiwo_Contig104:1156848..1166023- (Heterosigma akashiwo CCMP452)
GCGGCCGCGCTCACCGGCGACGAGGGGGACGCCCGCCGGCTCGGCCCCGA
GCGGATCTTCGCGGTGGAGAACTACCGTCAGGGGAAGTATCTCCAGGATC
CCGTGCTTGACCTGTCAGTTTTGGAGTTCCTCGATAACGTGGTAGAATCC
GCTAACTATTTTGTGTCAGCCCAGTACAAACCGCAAGGAAGTTGTTTGGT
TTCATGA back to top
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