mRNA_H-akashiwo_Contig104.40.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig104.40.1
Unique NamemRNA_H-akashiwo_Contig104.40.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: A0A7S3UUF1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUF1_HETAK)

HSP 1 Score: 435 bits (1119), Expect = 1.220e-152
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1
Query:    1 MSLDDPLAGKTVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGA 666
            MSLDDPLAGKTVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGA
Sbjct:   42 MSLDDPLAGKTVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGA 263          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: A0A8K1CTV0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTV0_PYTOL)

HSP 1 Score: 179 bits (455), Expect = 7.950e-52
Identity = 108/266 (40.60%), Postives = 155/266 (58.27%), Query Frame = 1
Query:   31 TVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            T+G +G GKI +AV  G     +G +P+ + VS R+  ++ AL   FPT ++I   N+E++++SD++ +GLLP++A+  LP L F   + +VSMMAT    EL G+V+LP E V++T+PLPG     G +LAYP    +AR     LL+ +GT V    E+E+  L  +TA +S FY        W  + GVD E +R FV A F++L A AG    D     SF E+  EAATPGGLNEQ    L   G ++L+    D I +RL
Sbjct:    8 TIGLLGTGKIGSAVVTGFCS-ENGWQPKHVYVSARTKAKADALVAKFPTRVSIGASNQEIIDKSDVVFIGLLPNIAKEELPKLNFASTKKVVSMMATIPYDELVGLVKLPKENVVRTVPLPGASKRSGPILAYPVNE-FAR----DLLTQIGTPVMVGNESEITTLTGMTALISFFYATCGSAQKWCVNNGVDDESSRSFVAAFFKSL-AEAGFSSTD-----SFDEMAEEAATPGGLNEQVHRGLLASGAYELVVDQVDDIFKRL 261          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: D0MYT8_PHYIT (F420_oxidored domain-containing protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0MYT8_PHYIT)

HSP 1 Score: 173 bits (439), Expect = 1.930e-49
Identity = 108/271 (39.85%), Postives = 158/271 (58.30%), Query Frame = 1
Query:   16 PLAGKTVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            P A  T+G +G GKI +AV  G     +G +P+  +VS R+  ++ AL   FP+ ++I   N+E+V++SD+I +GLLP+VA+  LP L+F   + +VSMMAT    EL  +V+LP E V++++PLP      G +LAYP    +AR  F Q+    GT V  T+EAE+  L  +TA +S FY   D    W  + GV  + +R ++ + F AL A AG E  +G     F E+  EAAT GGLNEQ    L+  G ++L+    DAI +RL
Sbjct:    3 PSADTTLGLLGTGKIGSAVFSGFCS-ENGWQPKHALVSARTKAKAEALVAKFPSRVSIGASNQEIVDKSDVIFIGLLPNVAREELPKLSFAGKK-VVSMMATIPYDELLQLVKLPTESVVRSVPLPAAAKRAGPILAYPD-NAFARDLFAQI----GTPVMVTEEAEITKLTGITALISFFYATCDTTQKWCVNNGVGDQASRDYIASFFHAL-ATAGAESNEG-----FGEMADEAATSGGLNEQVHRALQGNGGYELVADQLDAIFKRL 260          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: A0A0P1A664_PLAHL (Pyrroline-5-carboxylate reductase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A664_PLAHL)

HSP 1 Score: 169 bits (427), Expect = 1.200e-47
Identity = 109/271 (40.22%), Postives = 154/271 (56.83%), Query Frame = 1
Query:   16 PLAGKTVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            P A  T+G +G GKI +AV  G     +G +P+ + VS R+  +S AL   FP+ + I+  N+E+V++SD+I +GLLPDVA+  L  L+F   + +VSMMAT    EL  +V+ P E V++ +PLP      G +LAYP    YAR  F Q+    GT V   QEAE+  L  +TA +S FY   D    W    GVD + +R F+ A+F   +A AG +  +     SF E+  EAATPGGLNEQ    L   G ++L+    DAI +R+
Sbjct:    3 PSADTTLGLLGTGKIGSAVVAGFCS-DNGWQPKCVFVSARTNAKSDALAVKFPSRVCISASNQEIVDKSDVIFIGLLPDVAREELLKLSF-SGKKVVSMMATIRYDELLQLVQQPTECVVRCVPLPAAAKRSGPILAYPD-NAYARDLFAQI----GTPVMVAQEAEIIKLTGITALISFFYATCDTAQKWCVKNGVDDQTSRNFI-ASFIHTLATAGTQSNE-----SFGEMADEAATPGGLNEQVHRALDGNGGYELVADQLDAIFKRI 260          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: M4BH67_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BH67_HYAAE)

HSP 1 Score: 166 bits (421), Expect = 9.470e-47
Identity = 104/266 (39.10%), Postives = 154/266 (57.89%), Query Frame = 1
Query:   31 TVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            T+G +G GKI +AV  G     +G +P+ + VS R+  ++ AL   FP  ++I+  N+E+V++SD+I +GLLP++A+  LP L+F     +VSMMAT   +EL  +V++P E V++++PLP      G +LAYP    +AR  F Q+    GT V    EAE+  L  +TA +S FY   D    W  + GV  + +R F+ + F AL A AG E        +F E+  EAATPGGLNEQ    L+  G ++L+    DAI +RL
Sbjct:    8 TLGLLGTGKIGSAVFTGFCNA-NGWQPQHVYVSARTKAKAKALVAKFPDRVSISASNQEIVDKSDVIFIGLLPNIARQELPNLSFAGKN-VVSMMATIPYEELLELVKMPTENVVRSVPLPVAAKRAGPILAYPD-NAFARDLFDQI----GTPVMVVDEAEITKLTGITALISFFYATCDTTQQWCVNNGVGSQASRDFISSFFHAL-ATAGAESSV-----NFGEMAHEAATPGGLNEQVHLALQSNGGYELVADQLDAIFKRL 260          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: A0A484EE82_BRELC (F420_oxidored domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EE82_BRELC)

HSP 1 Score: 166 bits (421), Expect = 1.150e-46
Identity = 106/278 (38.13%), Postives = 156/278 (56.12%), Query Frame = 1
Query:   16 PLAGKTVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVD-------PEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            P A   +G +G GKI +A+  G     +G RP+   VS R+  ++  L   FP  ++I   N+E+V++SD+I +GLLP+VA+ +LP ++F   + ++SMMAT    EL  +V+LP E V++++PLP      G +LAYP  T YAR  F Q+    GT V   +EAE+  L  +TA +S FY   +    W  + GVD        + +R F+ +  +AL A AG E  +      F E+  EAATPGGLNEQ    L+  G ++LL    DAI +RL
Sbjct:    3 PSADTILGLLGTGKIGSAIMTGFCS-ENGWRPKHAFVSARTMAKAETLVAKFPDRVSIGASNQEIVDKSDVIFIGLLPNVAREVLPKISF-VGKKVISMMATIPYDELLQLVKLPSESVVRSVPLPVTAKRSGPILAYPDNT-YARDLFAQI----GTPVMLAEEAEITKLAGITALISYFYATCNITQQWCVNNGVDVVLPWTGSQASRDFISSFLQAL-ATAGAESNE-----DFGEMADEAATPGGLNEQVHRALQGNGGYELLADQLDAIYKRL 267          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: K3X8L6_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8L6_GLOUD)

HSP 1 Score: 176 bits (445), Expect = 1.380e-46
Identity = 107/266 (40.23%), Postives = 154/266 (57.89%), Query Frame = 1
Query:   31 TVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            T+G +G GKI +AV  G     +G +PR + VS R+  ++ AL + FP  I+I + N+E+V++SD+I +GLLP+VA+  LP L F   + +VSMMAT    EL  +V+LP E V++T+PLPG     G +LAYP    + R     LL+ +GT V    E+E+  L  +TA +S FY        W A+ GV  + +R FV + F++L       G + T P  F E+  EAATPGGLNEQ    L   G ++L+    DAI +RL
Sbjct:  499 TIGLLGTGKIGSAVVSGFCSA-NGWQPRHVTVSARTKTKADALVERFPERISIGKTNQEIVDKSDVIFIGLLPNVAKEELPKLHFAPTKKVVSMMATIPYDELLQLVKLPRENVVRTVPLPGAAKRSGPILAYPENE-FVR----DLLTQIGTPVMVANESEITTLTGMTALISYFYATCSSTQKWCANNGVGEQASRDFVASFFKSLA----EAGAESTEP--FDEMAEEAATPGGLNEQVHRGLLASGAYELVVDQVDAIFKRL 752          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: W4GJF4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJF4_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.130e-46
Identity = 108/271 (39.85%), Postives = 147/271 (54.24%), Query Frame = 1
Query:   25 GKTVGFIGCGKITTAVAKGLAR---GPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            G  +G +G GKI +AV  G            PR + VSPR   ++ AL   FP ++ IA  N+ V++ S+II +GLLPDVA+  LP L F Q+  IVSMMAT   QEL  ++RLP  QV++TIPLP      G +LAYP    + R    +LL  +GT V   +E E+  L  +TA +S FY        W    GV+ + +R +V + F++L A AG    +      F ++  EAATPGGLNEQ    L   G ++LL    DAI  RL
Sbjct:    8 GLVLGLLGTGKIGSAVMSGYCTPVADKSTWVPRHIYVSPRGADKAKALHARFPNHVTIAPTNQAVIDHSNIIFIGLLPDVARQELPLLNFPQNVTIVSMMATIPYQELLDLLRLPRSQVVRTIPLPSSSRRTGPILAYPPHP-FVR----ELLQQIGTPVMVNEEKEVTTLTGMTAMISFFYATCGTLQKWCVQNGVEEQASRDYVSSFFQSL-ADAGMISHE-----PFQDMAEEAATPGGLNEQTHRGLVASGAYELLLDEVDAIYTRL 267          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: F0W0N4_9STRA (Uncharacterized protein AlNc14C5G673 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0N4_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.800e-46
Identity = 100/264 (37.88%), Postives = 146/264 (55.30%), Query Frame = 1
Query:   37 GFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            G IG GKI +AV  G     +G +P+ + +S RS  +S  L+   P  I++  DN+ +++ SD++ +GLLPDVA+ ++P L F  +++I+SMMAT   ++L    +LP  QV++T+PLP      G VLAYP   L  +     LL  +GT V    E+E+  L  +TA +S FY        W  + GV  E AR F+ + F++L A AG E  +      F E+  E ATPGGLNEQ    L   G ++L+    D I RRL
Sbjct:    9 GLIGTGKIGSAVINGFCS-DNGWKPQHVYISKRSEEKSNVLRHAHPQRISVLDDNQAIIDNSDVVFIGLLPDVAKELIPELQFPPNKIIISMMATIPYEQLLNWTQLPSSQVVRTVPLPSAAKRSGPVLAYPKHELVEK-----LLKEIGTPVMVQNESEISTLTGVTALISFFYANCANIQQWNVNNGVGEESARFFISSFFKSL-AEAGFESKE-----YFTEMAEEGATPGGLNEQVHRGLLASGAYNLITDQMDEIFRRL 260          
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Match: A0A067BMY2_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BMY2_SAPPC)

HSP 1 Score: 164 bits (415), Expect = 8.100e-46
Identity = 103/268 (38.43%), Postives = 146/268 (54.48%), Query Frame = 1
Query:   34 VGFIGCGKITTAVAKGLAR---GPDGLRPRQLIVSPRSTGRSTALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQLIVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYARANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADKGVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNEQAVEFLREEGHFDLLERSNDAILRRL 828
            +G +G GKI +AV  G            P+ + VSPR T ++ AL+  FP  + IA  N+ V++ S++I +GLLPDVA+  LPAL F     ++SMMAT    EL  +VRLP E V++T+PLP      G +LAYP      ++   QLL  +GT V    E+E+  L  +TA +S FY        W  + GV+   +R +V + F++L A AG    +     +F ++  EAATPGGLNEQ    L   G +DL+    DAI  RL
Sbjct:   10 LGLLGTGKIGSAVMTGYCSPVAAKSTWEPKAIFVSPRGTEKAKALQAKFPAKVTIAATNQAVIDASNVIFIGLLPDVARQELPALHFPSHVTVISMMATIPYDELVQLVRLPKENVVRTVPLPSSSRRTGPILAYPK-----QSYVEQLLLQIGTPVMVDTESEVTTLTGMTAMISFFYATCGHLQQWCVNNGVEDSASRAYVASFFQSL-ADAGMVSTE-----AFHDMAEEAATPGGLNEQTHRGLTSSGAYDLMLDQVDAIFTRL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig104.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3UUF1_HETAK1.220e-152100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8K1CTV0_PYTOL7.950e-5240.60Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0MYT8_PHYIT1.930e-4939.85F420_oxidored domain-containing protein n=18 Tax=P... [more]
A0A0P1A664_PLAHL1.200e-4740.22Pyrroline-5-carboxylate reductase n=1 Tax=Plasmopa... [more]
M4BH67_HYAAE9.470e-4739.10Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A484EE82_BRELC1.150e-4638.13F420_oxidored domain-containing protein n=1 Tax=Br... [more]
K3X8L6_GLOUD1.380e-4640.23Protein kinase domain-containing protein n=1 Tax=G... [more]
W4GJF4_9STRA3.130e-4639.85Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
F0W0N4_9STRA4.800e-4637.88Uncharacterized protein AlNc14C5G673 n=1 Tax=Albug... [more]
A0A067BMY2_SAPPC8.100e-4638.43Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig104contigH-akashiwo_Contig104:1127912..1128742 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog42099.EPrPV00000021722
PFAMsF420_oxidored,P5CR_dimer
Model size831
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.3e-52
EggNOG OGsCOG0345@1|root,2QVZJ@2759|Eukaryota,1MCSQ@121069|Pythiales
DescriptionNADP oxidoreductase coenzyme F420-dependent. Source PGD
Cds size831
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387060.6605334-CDS-H-akashiwo_Contig104:1127911..11287421681387060.6605334-CDS-H-akashiwo_Contig104:1127911..1128742Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig104 1127912..1128742 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig104.40.1prot_H-akashiwo_Contig104.40.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig104 1127912..1128742 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig104.40.1

>prot_H-akashiwo_Contig104.40.1 ID=prot_H-akashiwo_Contig104.40.1|Name=mRNA_H-akashiwo_Contig104.40.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=277bp
MSLDDPLAGKTVGFIGCGKITTAVAKGLARGPDGLRPRQLIVSPRSTGRS
TALKQLFPTYINIAQDNEEVVEQSDIIMLGLLPDVAQSILPALTFRQDQL
IVSMMATPTEQELFGMVRLPHEQVLKTIPLPGVDTGDGVVLAYPAATLYA
RANFPQLLSLLGTAVPCTQEAELKPLIALTANLSPFYEWLDRQATWAADK
GVDPEVARRFVQATFEALVAGAGREGGDGTPPPSFAELGREAATPGGLNE
QAVEFLREEGHFDLLERSNDAILRRL*
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mRNA from alignment at H-akashiwo_Contig104:1127912..1128742-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig104.40.1 ID=mRNA_H-akashiwo_Contig104.40.1|Name=mRNA_H-akashiwo_Contig104.40.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=831bp|location=Sequence derived from alignment at H-akashiwo_Contig104:1127912..1128742- (Heterosigma akashiwo CCMP452)
ATGAGCTTGGACGACCCCTTGGCTGGGAAGACAGTGGGCTTTATTGGTTG CGGTAAAATAACCACAGCTGTAGCAAAGGGGCTTGCCCGAGGACCAGATG GCTTGAGGCCTCGTCAGCTGATTGTTTCGCCTCGAAGTACTGGGCGGAGC ACAGCTTTGAAGCAATTGTTCCCCACGTACATTAATATAGCTCAAGATAA TGAAGAAGTGGTCGAGCAATCTGATATCATCATGCTGGGTCTACTACCAG ACGTAGCTCAATCAATTCTACCAGCCTTGACTTTCAGGCAGGACCAGTTG ATAGTTTCTATGATGGCCACCCCCACTGAACAAGAACTGTTCGGTATGGT TCGCTTGCCGCACGAGCAAGTGCTCAAGACCATTCCGCTCCCGGGGGTGG ATACTGGCGACGGCGTGGTGTTGGCCTACCCCGCCGCCACCCTGTACGCC CGGGCCAACTTCCCCCAGCTGCTGTCCCTGCTGGGCACTGCCGTGCCCTG CACCCAGGAGGCGGAGCTTAAGCCGCTGATCGCACTTACGGCCAACCTCA GCCCGTTCTACGAATGGCTGGACCGGCAGGCCACCTGGGCCGCCGACAAA GGTGTGGACCCGGAGGTGGCCCGCCGCTTCGTTCAGGCCACCTTCGAGGC GCTAGTGGCCGGGGCAGGGAGGGAGGGGGGGGACGGCACCCCCCCGCCCT CGTTTGCCGAGCTGGGCCGCGAGGCGGCAACCCCGGGCGGGCTCAATGAG CAGGCAGTCGAATTCCTCCGCGAGGAGGGCCACTTCGATCTGCTGGAAAG GAGCAACGACGCTATCTTGCGCCGCTTATAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig104:1127912..1128742-

>mRNA_H-akashiwo_Contig104.40.1 ID=mRNA_H-akashiwo_Contig104.40.1|Name=mRNA_H-akashiwo_Contig104.40.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=831bp|location=Sequence derived from alignment at H-akashiwo_Contig104:1127912..1128742- (Heterosigma akashiwo CCMP452)
ATGAGCTTGGACGACCCCTTGGCTGGGAAGACAGTGGGCTTTATTGGTTG
CGGTAAAATAACCACAGCTGTAGCAAAGGGGCTTGCCCGAGGACCAGATG
GCTTGAGGCCTCGTCAGCTGATTGTTTCGCCTCGAAGTACTGGGCGGAGC
ACAGCTTTGAAGCAATTGTTCCCCACGTACATTAATATAGCTCAAGATAA
TGAAGAAGTGGTCGAGCAATCTGATATCATCATGCTGGGTCTACTACCAG
ACGTAGCTCAATCAATTCTACCAGCCTTGACTTTCAGGCAGGACCAGTTG
ATAGTTTCTATGATGGCCACCCCCACTGAACAAGAACTGTTCGGTATGGT
TCGCTTGCCGCACGAGCAAGTGCTCAAGACCATTCCGCTCCCGGGGGTGG
ATACTGGCGACGGCGTGGTGTTGGCCTACCCCGCCGCCACCCTGTACGCC
CGGGCCAACTTCCCCCAGCTGCTGTCCCTGCTGGGCACTGCCGTGCCCTG
CACCCAGGAGGCGGAGCTTAAGCCGCTGATCGCACTTACGGCCAACCTCA
GCCCGTTCTACGAATGGCTGGACCGGCAGGCCACCTGGGCCGCCGACAAA
GGTGTGGACCCGGAGGTGGCCCGCCGCTTCGTTCAGGCCACCTTCGAGGC
GCTAGTGGCCGGGGCAGGGAGGGAGGGGGGGGACGGCACCCCCCCGCCCT
CGTTTGCCGAGCTGGGCCGCGAGGCGGCAACCCCGGGCGGGCTCAATGAG
CAGGCAGTCGAATTCCTCCGCGAGGAGGGCCACTTCGATCTGCTGGAAAG
GAGCAACGACGCTATCTTGCGCCGCTTATAA
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