mRNA_H-akashiwo_Contig104.32.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A6V1P7M0_HETAK (Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M0_HETAK) HSP 1 Score: 229 bits (584), Expect = 1.300e-75 Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1 Query: 1 MAGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAKTA 360 MAGKAGRGKKSQT+SSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKK KTA Sbjct: 27 MAGKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTKTA 146
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A7S3UYM8_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM8_HETAK) HSP 1 Score: 212 bits (539), Expect = 1.540e-68 Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 1 Query: 4 AGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351 A GRGKKSQ+KSSKAGLQFPVGRIGRYLK GRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRI+PRHLQLAVRNDEELNKLLGGVTI+QGGVLPNIHTVLLPKK+ Sbjct: 34 AAAGGRGKKSQSKSSKAGLQFPVGRIGRYLKNGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTISQGGVLPNIHTVLLPKKS 149
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A7S2GRL8_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRL8_9STRA) HSP 1 Score: 197 bits (502), Expect = 2.760e-63 Identity = 99/115 (86.09%), Postives = 108/115 (93.91%), Query Frame = 1 Query: 7 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351 GK GRGKKS T S+KAGLQFPVGRIGRYLKQG+++ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RI PRH+ LAV+NDEELNKLLGGVTIA GGVLPNIH+VLLPKKA Sbjct: 5 GKGGRGKKSTTSSAKAGLQFPVGRIGRYLKQGKFATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIAPRHITLAVKNDEELNKLLGGVTIAGGGVLPNIHSVLLPKKA 119
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A7S2V3S5_9STRA (Histone H2A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3S5_9STRA) HSP 1 Score: 196 bits (499), Expect = 4.560e-63 Identity = 97/110 (88.18%), Postives = 106/110 (96.36%), Query Frame = 1 Query: 25 KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAK 354 KKS TKS+KAGLQFPVGRIGR+LK+GRY+ RVGAGAPVY+AAVLEYLCAEILELAGNAARDNKK+RI+PRHLQLA+RNDEELNKLLGGVTI+QGGVLPNIH VLLPKK K Sbjct: 7 KKSVTKSTKAGLQFPVGRIGRFLKKGRYAPRVGAGAPVYMAAVLEYLCAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGGVTISQGGVLPNIHAVLLPKKTK 116
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A7R9YCM0_9STRA (Histone H2A n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCM0_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.750e-62 Identity = 96/110 (87.27%), Postives = 105/110 (95.45%), Query Frame = 1 Query: 28 KSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAKT 357 KS T+SSKAGLQFPVGR+GRYLKQGRY R+G+GAPVYLAAVLEYLCAEILELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIAQGGVLPNIH VLLPKK+K+ Sbjct: 22 KSMTRSSKAGLQFPVGRVGRYLKQGRYCDRIGSGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHVQLAVRNDEELNKLLGNVTIAQGGVLPNIHNVLLPKKSKS 131
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA) HSP 1 Score: 194 bits (493), Expect = 4.400e-62 Identity = 99/116 (85.34%), Postives = 108/116 (93.10%), Query Frame = 1 Query: 7 GKAGRG-KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351 GK GRG KKS T S+KAGLQFPVGRIGRYL+QG+Y+ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RIVPRH+ LAV+NDEELNKLLGGVTIA GGVLPNIH VLLPKK+ Sbjct: 5 GKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKS 120
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI) HSP 1 Score: 194 bits (492), Expect = 6.260e-62 Identity = 96/114 (84.21%), Postives = 107/114 (93.86%), Query Frame = 1 Query: 7 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKK 348 GK GRGKKS T+S+KAGLQFPVGR+GR+LK+G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIA GGVLPNIH VLLPKK Sbjct: 5 GKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE) HSP 1 Score: 194 bits (493), Expect = 6.700e-62 Identity = 98/115 (85.22%), Postives = 106/115 (92.17%), Query Frame = 1 Query: 7 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351 GK GRGKKS +KSSKAGLQFPV RIGRYLK+G+Y+ RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIA GGVLPNIH VLLPKK+ Sbjct: 5 GKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A7S0S3G4_9CHLO (Histone H2A n=2 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S3G4_9CHLO) HSP 1 Score: 194 bits (493), Expect = 7.390e-62 Identity = 95/115 (82.61%), Postives = 109/115 (94.78%), Query Frame = 1 Query: 10 KAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAK 354 K G GKK+Q++S+KAGLQFPVGRI RYLK+G+Y+ R+GAGAPVYLAAVLEYLCAE+LELAGNAARDNKKTRIVPRH+QLA+RNDEEL+KLLG VTIA GGVLPNIH+VLLPKK+K Sbjct: 16 KGGSGKKAQSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLCAEVLELAGNAARDNKKTRIVPRHIQLAIRNDEELSKLLGEVTIASGGVLPNIHSVLLPKKSK 130
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA) HSP 1 Score: 193 bits (491), Expect = 8.890e-62 Identity = 98/116 (84.48%), Postives = 108/116 (93.10%), Query Frame = 1 Query: 7 GKAGRG-KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351 GK GRG KKS T S+KAGLQFPVGRIGRYL+QG+Y+ R+GAGAPVYLAAVLEYLCAEILELAGNAARDNKK+RIVPRH+ LAV+NDEELNKLLGGVTIA GGVLPNIH +LLPKK+ Sbjct: 5 GKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKS 120 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig104.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig104.32.1 >prot_H-akashiwo_Contig104.32.1 ID=prot_H-akashiwo_Contig104.32.1|Name=mRNA_H-akashiwo_Contig104.32.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=121bp MAGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAback to top mRNA from alignment at H-akashiwo_Contig104:988206..988568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig104.32.1 ID=mRNA_H-akashiwo_Contig104.32.1|Name=mRNA_H-akashiwo_Contig104.32.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=363bp|location=Sequence derived from alignment at H-akashiwo_Contig104:988206..988568+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig104:988206..988568+ >mRNA_H-akashiwo_Contig104.32.1 ID=mRNA_H-akashiwo_Contig104.32.1|Name=mRNA_H-akashiwo_Contig104.32.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=363bp|location=Sequence derived from alignment at H-akashiwo_Contig104:988206..988568+ (Heterosigma akashiwo CCMP452)back to top |