mRNA_H-akashiwo_Contig1023.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: A0A6J2X5T6_SITOR (uncharacterized protein LOC115875260 n=4 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2X5T6_SITOR) HSP 1 Score: 130 bits (327), Expect = 1.700e-31 Identity = 87/220 (39.55%), Postives = 117/220 (53.18%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFKAS-------------EPSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 V+NL+D+ LT E+ +L G NF PV DIIA TE L S E + V +L+ T K KSNLSR +A+KSL AD I +LPADKGN TVVM ++DY SK+E ++ + + ++PT + KAS E P LYG+PK+HK P+R I SA GS ++LA L+ +L P VG T +YV+D Sbjct: 103 VVNLTDKTLTTSEVTLLAKGGNFAITPKVVPVEDIIAGTEAAIRNLPNSIADEIRFET----VNILR-----TAKAPKSNLSREEHQALKSLNADKDILVLPADKGNATVVMKSEDYRSKIEDLLEPQTYKLLKKDPTALIVRNTNRLIKASSLPEHLKSKLINSEAQPPRLYGLPKIHKASVPLRPIVSAPGSPTYNLAKYLTTILQPKVGNTNSYVKD 313
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: A0A6J2X882_SITOR (uncharacterized protein LOC115875682 n=9 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2X882_SITOR) HSP 1 Score: 130 bits (327), Expect = 2.290e-31 Identity = 87/220 (39.55%), Postives = 117/220 (53.18%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFKAS-------------EPSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 V+NL+D+ LT E+ +L G NF PV DIIA TE L S E + V +L+ T K KSNLSR +A+KSL AD I +LPADKGN TVVM ++DY SK+E ++ + + ++PT + KAS E P LYG+PK+HK P+R I SA GS ++LA L+ +L P VG T +YV+D Sbjct: 103 VVNLTDKTLTTSEVTLLAKGGNFAITPKVVPVEDIIAGTEAAIRNLPNSIADEIRFET----VNILR-----TAKAPKSNLSREEHQALKSLNADKDILVLPADKGNATVVMKSEDYRSKIEDLLEPQTYKLLKKDPTALIVRNTNRLIKASSLPEHLKSKLINSEAQPPRLYGLPKIHKASVPLRPIVSAPGSPTYNLAKYLTTILQPKVGNTNSYVKD 313
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: A0A6J2X9A8_SITOR (uncharacterized protein LOC115876238 n=2 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2X9A8_SITOR) HSP 1 Score: 130 bits (327), Expect = 2.360e-31 Identity = 87/220 (39.55%), Postives = 117/220 (53.18%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFKAS-------------EPSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 V+NL+D+ LT E+ +L G NF PV DIIA TE L S E + V +L+ T K KSNLSR +A+KSL AD I +LPADKGN TVVM ++DY SK+E ++ + + ++PT + KAS E P LYG+PK+HK P+R I SA GS ++LA L+ +L P VG T +YV+D Sbjct: 131 VVNLTDKTLTTSEVTLLAKGGNFAITPKVVPVEDIIAGTEAAIRNLPNSIADEIRFET----VNILR-----TAKAPKSNLSREEHQALKSLNADKDILVLPADKGNATVVMKSEDYRSKIEDLLEPQTYKLLKKDPTALIVRNTNRLIKASSLPEHLKSKLINSEAQPPRLYGLPKIHKASVPLRPIVSAPGSPTYNLAKYLTTILQPKVGNTNSYVKD 341
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: UPI001ED8839A (uncharacterized protein LOC124161462 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8839A) HSP 1 Score: 118 bits (295), Expect = 1.880e-28 Identity = 76/227 (33.48%), Postives = 118/227 (51.98%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFKAS--------------------EPSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 V+NLS++ + E + V+ GLNF P P DIIA E KL V +E A++ + K+ K+N+SRS AI++L+ + +IK+LPADKGN TV+MN++DY K+ ++ + I R+PT S + + K+ P P LYG+PK+HK P+R I SA+GS ++LA L+ +L P VG ++++ Sbjct: 83 VINLSNQSIDEPTISVISKGLNFAPAPRYIPYCDIIAGVEPAVRKLPVDLAEEVRAEISMALKRA---------KLPKANISRSEQAAIRALQRNKAIKVLPADKGNATVLMNSEDYHQKILDILRDQAYRKINRDPTDSVTRKTIALIKSCGLPTDTAKNLHPPAPDXXXXXPVPPRLYGLPKIHKDGAPLRPIVSAIGSPTYNLAKFLTNILSPHVGNCDHHIKN 300
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: A0A8K0KQL7_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KQL7_LADFU) HSP 1 Score: 112 bits (281), Expect = 6.860e-27 Identity = 69/220 (31.36%), Postives = 115/220 (52.27%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFKASE-------------PSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 V+NL+D +L E + +L GLNF P + P DII E KL E +++ + + + KSN++ + ++SLR + IK+LPADKGN TV++ +DDY K++ ++ + I +PT+++ + + K +E + P LYG+PK+HK P+R I SA+GS ++LA L+K+L P VG ++ + Sbjct: 7 VVNLTDEILDEPTMAILSRGLNFAPAPRSIPHNDIIGGIEQAIRKLRKDEADEVRSEVAMTLKRAV---------LPKSNITFKERKELQSLRQNPDIKVLPADKGNATVLLRSDDYHRKIQDILKDPTYRPIHNDPTEAKTRMTISLIKLAEIPAETTKNLRPQAAAPPRLYGLPKIHKAGVPLRPIVSAIGSPTYNLAKYLTKILSPFVGNREHHIEN 217
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: UPI001ED8787D (uncharacterized protein LOC124164450 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8787D) HSP 1 Score: 115 bits (288), Expect = 9.290e-27 Identity = 74/220 (33.64%), Postives = 115/220 (52.27%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFK-------------ASEPSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 V+NL+D + ED L VL GLNF P + P DII E KL ++ A++ + + + KSN+S A++SLR ++++ ILPADKGN TV+M DY K+++ + S I R+PT S +++ K A P P +YG+PK+HK+ P+R I SA+ S ++LA L+ +L P VG + +V++ Sbjct: 57 VINLTDERIDEDTLSVLSKGLNFAPAPRSIPFSDIIGGVEQAVRKLPNDAAEDIRAEISMTLKKAVPP---------KSNISFKERAALRSLRKNTAVTILPADKGNATVLMKTLDYQEKMKELLTNNSYKRIPRDPTDSISRKTIKLIKEAGIPLETARHLRAEAPVPPRIYGLPKIHKEGVPLRPIVSAISSPTYNLAKYLTGILAPHVGVSEHHVKN 267
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: A0A8K0KLB9_LADFU (Uncharacterized protein (Fragment) n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KLB9_LADFU) HSP 1 Score: 113 bits (282), Expect = 1.680e-26 Identity = 77/220 (35.00%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKS---------RESG----AVEVFKASEPSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 V+NLS R ++E VL GLN P T P D I A E L +E+ +++ + + SNLSR A+K L+ + + ILPADKGN TV+M D Y K+++ ++ GS IAR+ T + +ESG ++ P+ P LYG+PKVHK + P+R I SA+ S + LA L+KLL P+VG + +V++ Sbjct: 99 VINLSGRNISEAAKSVLSKGLNIAPAPRTMPYQDFIGAIEPALRFLPQESAEETRSKIALALKKATPP---------PSNLSREEREALKDLKDNRDVVILPADKGNATVLMERDSYTRKIQEILKDGSYKVIARDLTDTLTRKTSTLLKESGLPPDTIKGLLPQAPAPPRLYGLPKVHKAEIPLRPIVSAINSPTYFLAKFLAKLLAPIVGHNKHHVQN 309
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: UPI001ED86716 (uncharacterized protein LOC124172478 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86716) HSP 1 Score: 115 bits (288), Expect = 3.870e-26 Identity = 74/220 (33.64%), Postives = 115/220 (52.27%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFK-------------ASEPSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 V+NL+D + ED L VL GLNF P + P DII E KL ++ A++ + + + KSN+S A++SLR ++++ ILPADKGN TV+M DY K+++ + S I R+PT S +++ K A P P +YG+PK+HK+ P+R I SA+ S ++LA L+ +L P VG + +V++ Sbjct: 70 VINLTDERIDEDTLSVLSKGLNFAPAPRSIPFSDIIGGVEQAVRKLPNDAAEDIRAEISMTLKKAVPP---------KSNISFKERAALRSLRKNTAVTILPADKGNATVLMKTLDYQEKMKELLTNNSYKRIPRDPTDSISRKTIKLIKEAGIPLETARHLRAEAPVPPRIYGLPKIHKEGVPLRPIVSAISSPTYNLAKYLTGILAPHVGVSEHHVKN 280
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: UPI001ED8A876 (uncharacterized protein LOC124164403 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8A876) HSP 1 Score: 114 bits (286), Expect = 6.760e-26 Identity = 74/219 (33.79%), Postives = 114/219 (52.05%), Query Frame = 1 Query: 10 VLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFK-------------ASEPSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVR 627 V+NL+D + ED L VL GLNF P + P DII E KL ++ A++ + + + KSN+S A++SLR ++++ ILPADKGN TV+M DY K+++ + S I R+PT S +++ K A P P +YG+PK+HK+ P+R I SA+ S ++LA L+ +L P VG + +V+ Sbjct: 70 VINLTDERIDEDTLSVLSKGLNFAPAPRSIPFSDIIGGVEQAVRKLPNDAAEDIRAEISMTLKKAVPP---------KSNISFKERAALRSLRKNTAVTILPADKGNATVLMKTLDYQEKMKELLTNNSYKRIPRDPTDSISRKTIKLIKEAGIPLETARHLRAEAPVPPRIYGLPKIHKEGVPLRPIVSAISSPTYNLAKYLTGILAPHVGVSEHHVK 279
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Match: UPI001ED8764C (uncharacterized protein LOC124157319 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8764C) HSP 1 Score: 112 bits (280), Expect = 1.160e-25 Identity = 73/221 (33.03%), Postives = 114/221 (51.58%), Query Frame = 1 Query: 7 AVLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSVSHGQESAAQLMGGMVEVLQSFRQQTYKVRKSNLSRSHWRAIKSLRADSSIKILPADKGNKTVVMNADDYLSKLEQRVQAGSNVAIARNPTKSRESGAVEVFKASE-------------PSVPWLYGMPKVHKKDCPVREISSAVGSSGHDLAAALSKLLMPMVGKTRTYVRD 630 +V+NL+D L++ + VL GLNF A P +++ E KL +E A +L G + +L + K +N++R +A++ LR + I I PADKGN TVVMN +DY+SK+ + + +PT + G + S P P LYG+PK+HK+ P+R I SA+ S H LA L++ L+P G+T T+V++ Sbjct: 115 SVVNLTDIHLSDAAISVLSKGLNFAVAPARLPKEELVTEVEYAVRKLP----KEEADELRGEVSRILLNS-----KTPVNNVNREEKKALRELRTNDDIIITPADKGNATVVMNKEDYISKINDLLNDDTYSEEKLDPTSRTQKGIKHIINQSSIPPEERKWIIESAPKPPRLYGLPKIHKQGVPLRPIVSAIDSPSHKLAKYLAQQLVPFSGQTSTHVKN 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1023.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1023.2.1 >prot_H-akashiwo_Contig1023.2.1 ID=prot_H-akashiwo_Contig1023.2.1|Name=mRNA_H-akashiwo_Contig1023.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=212bp MDAVLNLSDRVLTEDELYVLDLGLNFQPVLATPPVMDIIAATEVLADKLSback to top mRNA from alignment at H-akashiwo_Contig1023:18839..19567+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1023.2.1 ID=mRNA_H-akashiwo_Contig1023.2.1|Name=mRNA_H-akashiwo_Contig1023.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=729bp|location=Sequence derived from alignment at H-akashiwo_Contig1023:18839..19567+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1023:18839..19567+ >mRNA_H-akashiwo_Contig1023.2.1 ID=mRNA_H-akashiwo_Contig1023.2.1|Name=mRNA_H-akashiwo_Contig1023.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=636bp|location=Sequence derived from alignment at H-akashiwo_Contig1023:18839..19567+ (Heterosigma akashiwo CCMP452)back to top |