mRNA_H-akashiwo_Contig1023.12.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: A0A6V1V4J2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V4J2_HETAK) HSP 1 Score: 301 bits (772), Expect = 3.660e-100 Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 1 Query: 1 VKNYFELKKMLKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN 453 VKN FELKKMLKGV+LSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELL+ICLETHFKTIDG+IFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN Sbjct: 116 VKNSFELKKMLKGVRLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN 266
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: A0A7S3XWS7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWS7_HETAK) HSP 1 Score: 189 bits (480), Expect = 1.260e-59 Identity = 88/112 (78.57%), Postives = 100/112 (89.29%), Query Frame = 1 Query: 118 LEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN 453 +E+VRQKLEE+ETL +RTPWSPAQI+EL +ICLETHFKTI G+IF+Q GTPIGKSISGPIAGIYLNWF+E+FIYS+RCK+KPTLW RMR IWDHGEEKLQELL HVN Sbjct: 1 MEIVRQKLEEEETLSQRTPWSPAQIIELWEICLETHFKTIYGRIFSQPGGTPIGKSISGPIAGIYLNWFDEEFIYSERCKNKPTLWKRMRG----IWDHGEEKLQELLGHVN 108
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: A0A7S4DDA1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDA1_HETAK) HSP 1 Score: 145 bits (366), Expect = 8.220e-38 Identity = 71/145 (48.97%), Postives = 101/145 (69.66%), Query Frame = 1 Query: 1 VKNYFELKKMLKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRC---KHKPTLWVRMRDDVFIIWDHGEEK 426 +K+ + LK+ML V L L SFD+ +YPSIP + ALEV+ +KL++D TL +RT P QI+ LL++C+ETHFK IDG I+TQ+DG PIGKSISG IAGIY+ +EE+ + +++ K +P W R +DDV ++W G E+ Sbjct: 180 IKDSYHLKEMLNEVVLEEGDCLGSFDIDCMYPSIPREAALEVIYRKLQKDRTLKDRTDLKPRQIITLLRVCMETHFKDIDGDIWTQTDGCPIGKSISGVIAGIYMADYEERHVLNNKQLPPKWRPKFWKRQKDDVIVVWPSGAEE 324
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: A0A2J7QJN5_9NEOP (Reverse transcriptase domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QJN5_9NEOP) HSP 1 Score: 123 bits (308), Expect = 9.280e-30 Identity = 63/151 (41.72%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 1 VKNYFELKKMLKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN 453 VKN ++LK V L R+ L SFDV +L+ ++PV +AL+V+R +L D TL ER+ I+ELL +CL T + D + Q DG +G S+S ++ IY+ FE+ I D + KP+LW+R DD F+IW HG E +Q L+H+N Sbjct: 230 VKNSGHFIELLKSVNLRRHDMLASFDVVSLFTNVPVDEALQVIRSRLSNDNTLAERSVLKVEAIMELLDVCLRTTYFQGDDGFYQQKDGMAMGSSLSPVVSNIYMEHFEQLAI--DSAQDKPSLWLRYVDDTFVIWPHGAEGIQNFLTHLN 378
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: A0A2J7PER2_9NEOP (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PER2_9NEOP) HSP 1 Score: 115 bits (287), Expect = 2.090e-28 Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 1 VKNYFELKKMLKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEE 423 VKN ++LK V L R+ L SFDV +L+ ++PV +AL+V+R +L D TL ER+ I+ELL +CL T + +D + Q DG +G S+S ++ IY+ FE+ I D + KP+LW+R DD F+IW HG E Sbjct: 151 VKNSGHFIELLKSVNLRRHDMLASFDVVSLFTNVPVDEALQVIRSRLSNDNTLAERSVLKVEAIMELLDVCLRTTYFQMDDGFYQQKDGMAMGSSLSPVVSNIYMEHFEQLAI--DSAQDKPSLWLRYVDDTFVIWPHGAE 289
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: A0A1V4SZP3_9GAMM (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Oceanospirillum multiglobuliferum TaxID=64969 RepID=A0A1V4SZP3_9GAMM) HSP 1 Score: 107 bits (267), Expect = 4.170e-27 Identity = 54/125 (43.20%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 31 LKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFII 405 +K V L+ +LVSFDV AL+ SIP K+A++V+++KL++D TL ERT + QIVELL CL+T + + D + + Q+ G +G +S +A IY+ FE+Q + S H P++W+R DD F+I Sbjct: 9 IKEVNLTPEQKLVSFDVSALFTSIPTKEAIKVIKEKLQQDPTLKERTNLNVDQIVELLMFCLDTTYFSFDEKFYKQTHGAAMGSPVSPIVANIYMESFEQQALSS--AIHTPSIWLRYVDDTFVI 131
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: UPI001E274E29 (uncharacterized protein LOC123683035 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E274E29) HSP 1 Score: 109 bits (272), Expect = 2.980e-25 Identity = 56/151 (37.09%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 1 VKNYFELKKMLKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN 453 VKN + ++ ++ +VSFDV +L+ ++P + LE+VR+KLEED+TL ERT S I+++L +C++T + +D + Q G +G +S +A IY+ FE + + D+ KP LW R DD F+IW HG+E + L H+N Sbjct: 2 VKNTEHFIETMRTQEILNQDTMVSFDVSSLFTNVPTDQTLEIVRKKLEEDQTLAERTTLSIHAIMDMLSVCIKTTYFQVDNIFYQQEFGMAMGSPLSPVLADIYMEDFEGRAL--DQYVLKPKLWRRYVDDTFVIWPHGKETIAGFLEHLN 150
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: UPI001E277682 (uncharacterized protein LOC123678684 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E277682) HSP 1 Score: 109 bits (272), Expect = 7.340e-25 Identity = 56/151 (37.09%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 1 VKNYFELKKMLKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN 453 VKN + ++ ++ +VSFDV +L+ ++P + LE+VR+KLEED+TL ERT S I+++L +C++T + +D + Q G +G +S +A IY+ FE + + D+ KP LW R DD F+IW HG+E + L H+N Sbjct: 270 VKNTEHFIETMRTQEILNQDTMVSFDVSSLFTNVPTDQTLEIVRKKLEEDQTLAERTTLSINAIMDMLSVCIKTTYFQVDNIFYQQEFGMAMGSPLSPVLADIYMEDFEGRAL--DQYVLKPKLWRRYVDDTFVIWPHGKETIAGFLEHLN 418
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: UPI001E276C2B (uncharacterized protein LOC123672141 n=2 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E276C2B) HSP 1 Score: 108 bits (271), Expect = 1.020e-24 Identity = 56/151 (37.09%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 1 VKNYFELKKMLKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN 453 VKN + ++ ++ +VSFDV +L+ ++P + LE+VR+KLEED+TL ERT S I+++L +C++T + +D + Q G +G +S +A IY+ FE + + D+ KP LW R DD F+IW HG+E + L H+N Sbjct: 299 VKNTEPFIETMRTQEILNQDTMVSFDVSSLFTNVPTDQTLEIVRKKLEEDQTLAERTTLSINAIMDMLSVCIKTTYFQVDNIFYQQEFGMAMGSPLSPVLADIYMEDFEGRAL--DQYVLKPKLWRRYVDDTFVIWPHGKETITGFLEHLN 447
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Match: UPI001C91F7F2 (uncharacterized protein LOC122370714 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C91F7F2) HSP 1 Score: 102 bits (253), Expect = 1.530e-22 Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 31 LKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLQICLETHFKTIDGQIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVN 453 LK + L+ + ++SFDV +L+ +PV++A++V+ KL ED+TL ER+ I +L+ CLE + G + Q +G P+G S+S +A Y+ E+ + S K PTLW R DD FI+W HG+E LQE +N Sbjct: 75 LKQLDLNGSEEMMSFDVVSLFTRVPVQEAVDVICDKLAEDDTLFERSEIGVDSIRKLMLACLECRYFLCLGAFYEQKEGAPMGLSLSVVLANAYMEHLEQSILTSATLK--PTLWRRYVDDTFILWPHGDEALQEFHQRLN 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1023.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1023.12.1 >prot_H-akashiwo_Contig1023.12.1 ID=prot_H-akashiwo_Contig1023.12.1|Name=mRNA_H-akashiwo_Contig1023.12.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=142bp MLKGVKLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWback to top mRNA from alignment at H-akashiwo_Contig1023:353168..353620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1023.12.1 ID=mRNA_H-akashiwo_Contig1023.12.1|Name=mRNA_H-akashiwo_Contig1023.12.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=453bp|location=Sequence derived from alignment at H-akashiwo_Contig1023:353168..353620+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1023:353168..353620+ >mRNA_H-akashiwo_Contig1023.12.1 ID=mRNA_H-akashiwo_Contig1023.12.1|Name=mRNA_H-akashiwo_Contig1023.12.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=426bp|location=Sequence derived from alignment at H-akashiwo_Contig1023:353168..353620+ (Heterosigma akashiwo CCMP452)back to top |