mRNA_H-akashiwo_Contig1022.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: A0A6V1TAB6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TAB6_HETAK) HSP 1 Score: 145 bits (365), Expect = 3.000e-40 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 Query: 1 VGEHGGSKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHNW 213 VGEHGGSKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHNW Sbjct: 101 VGEHGGSKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHNW 171
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: A0A7S2UST8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UST8_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.940e-26 Identity = 51/65 (78.46%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 19 SKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHNW 213 S A PGTVYFVATPIGNLGDIT RA +ILR+ D VASEDTRRTGRLLQ L KK Q SHHEHNW Sbjct: 42 STAVPGTVYFVATPIGNLGDITLRALDILRSCDAVASEDTRRTGRLLQLLGIPKKAQFSHHEHNW 106
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: W7TJ55_9STRA (Tetrapyrrole methylase family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ55_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.120e-20 Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 1 Query: 19 SKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHN 210 +K PGT+YFV+TP+GNLGDIT RA ++LR VD++ASEDTR TG LL+ L GKK Q+SHH+HN Sbjct: 130 NKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHN 193
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: A0A4D9CZ36_9STRA (TP_methylase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ36_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 4.640e-20 Identity = 41/60 (68.33%), Postives = 51/60 (85.00%), Query Frame = 1 Query: 31 PGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHN 210 PGT+YFV+TP+GNLGDIT RA ++LR VD++ASEDTR TG LL+ L GKK Q+SHH+HN Sbjct: 2 PGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHN 61
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: A0A7S0LHT1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHT1_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 1.240e-18 Identity = 40/64 (62.50%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 19 SKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHN 210 S G VYFV+TPIG+L DIT RA LRT D++A EDTR T RLL +L GKKR +SHHEHN Sbjct: 6 SGLSAGHVYFVSTPIGHLEDITIRAIRTLRTADVIACEDTRHTARLLHHLGVGKKRLVSHHEHN 69
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: A0A7S4FCJ4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCJ4_CHRCT) HSP 1 Score: 87.8 bits (216), Expect = 1.240e-18 Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 19 SKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHN 210 S +PG VYFV+TPIGNL DIT RA LR VD+VASEDTR T RLL++L GKK +SHHEHN Sbjct: 229 STVRPGHVYFVSTPIGNLEDITLRAVRTLRQVDVVASEDTRHTSRLLRHLGVGKKLLVSHHEHN 292
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: A0A7S3U053_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3U053_EMIHU) HSP 1 Score: 86.3 bits (212), Expect = 1.600e-18 Identity = 43/66 (65.15%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 13 GGSKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHN 210 G S GTVY V TPIGNL D+T RAA LR VD+VASEDTRRT LL++L A K+Q+SHHEHN Sbjct: 23 GASSLTKGTVYIVGTPIGNLDDLTLRAARTLREVDVVASEDTRRTAVLLRHLGASPKKQLSHHEHN 88
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: A0A0M4TUU9_9NOSO (Ribosomal RNA small subunit methyltransferase I n=7 Tax=Nostocales TaxID=1161 RepID=A0A0M4TUU9_9NOSO) HSP 1 Score: 83.2 bits (204), Expect = 1.490e-17 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 22 KAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHN 210 K QPGT+Y V TPIGNL DIT+RA IL+TVD++A+EDTR TG+LLQ+ K QIS+HEHN Sbjct: 5 KLQPGTLYVVGTPIGNLEDITFRAVRILQTVDLIAAEDTRHTGKLLQHFQV-KTPQISYHEHN 66
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: A0A0D8ZTM8_9CYAN (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Aliterella atlantica CENA595 TaxID=1618023 RepID=A0A0D8ZTM8_9CYAN) HSP 1 Score: 83.2 bits (204), Expect = 1.570e-17 Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 19 SKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHN 210 S+ QPGT+Y V TPIGNL DITYRA IL+ VD++A+EDTR TGRLLQ+ K QIS+H+HN Sbjct: 3 SEPQPGTLYIVGTPIGNLEDITYRAVRILQNVDLIAAEDTRHTGRLLQHFQV-KAPQISYHDHN 65
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Match: UPI000475CE78 (16S rRNA (cytidine(1402)-2'-O)-methyltransferase n=1 Tax=Fortiea contorta TaxID=1892405 RepID=UPI000475CE78) HSP 1 Score: 82.4 bits (202), Expect = 3.020e-17 Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 28 QPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKKRQISHHEHN 210 QPGT+Y VATPIGNL DIT RA IL+TVD++A+EDTR TG+LLQ+L K QIS+HEHN Sbjct: 6 QPGTLYVVATPIGNLEDITLRAVRILQTVDLIAAEDTRHTGKLLQHLQI-KTPQISYHEHN 65 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1022.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1022.3.1 >prot_H-akashiwo_Contig1022.3.1 ID=prot_H-akashiwo_Contig1022.3.1|Name=mRNA_H-akashiwo_Contig1022.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=71bp VGEHGGSKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGback to top mRNA from alignment at H-akashiwo_Contig1022:206630..211481- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1022.3.1 ID=mRNA_H-akashiwo_Contig1022.3.1|Name=mRNA_H-akashiwo_Contig1022.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=4852bp|location=Sequence derived from alignment at H-akashiwo_Contig1022:206630..211481- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1022:206630..211481- >mRNA_H-akashiwo_Contig1022.3.1 ID=mRNA_H-akashiwo_Contig1022.3.1|Name=mRNA_H-akashiwo_Contig1022.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=213bp|location=Sequence derived from alignment at H-akashiwo_Contig1022:206630..211481- (Heterosigma akashiwo CCMP452)back to top |