mRNA_H-akashiwo_Contig1022.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: A0A7S3YET0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YET0_HETAK) HSP 1 Score: 358 bits (920), Expect = 2.820e-123 Identity = 182/194 (93.81%), Postives = 184/194 (94.85%), Query Frame = 1 Query: 1 MAVGILQDQVASGLAAYYQMALNGLQSKTDSDEPDVFLRMLGFKHRLSRTIFSSTAEASHPSSADSGESVAPDCAYAFCCDGALPSRLLAELGPNWG-PGGPFWREHAYPTPSFFSYSYDLAAPPSNLVEAAIRRLFPLVRQRFPAAAAARTAEWWVHLRDSGGQHQLHYDSDEVRLVGG-GLRHPAVSSVVYL 576 MA GILQDQVASGLAAYYQMALNGLQSKTDSDEPDVFLRMLGFKHRLSRTIFSSTAE SHPSSA+SGESVAPDCAYAFCCDGALPSRLLAEL +G PGGPFWREHAYPTPSFFSYSYDL A PSNLVEAAIRRLFPLVRQRFPAAAAARTAEWWVHLRDSGGQHQLHYDSDEVRLV G GLRHPAVSSVVYL Sbjct: 103 MAEGILQDQVASGLAAYYQMALNGLQSKTDSDEPDVFLRMLGFKHRLSRTIFSSTAEESHPSSANSGESVAPDCAYAFCCDGALPSRLLAELRAKFGDPGGPFWREHAYPTPSFFSYSYDLTASPSNLVEAAIRRLFPLVRQRFPAAAAARTAEWWVHLRDSGGQHQLHYDSDEVRLVRGEGLRHPAVSSVVYL 296
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: A0A1Q9EUV9_SYMMI (Putative prolyl 4-hydroxylase 11 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EUV9_SYMMI) HSP 1 Score: 94.0 bits (232), Expect = 7.640e-19 Identity = 69/199 (34.67%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 34 SGLAAYYQMALNGLQSKTDSDEPDVFLRMLGFKHRLSRTIFSSTAEASHPSSADSGESVAPDCAYAFCCDGALPSRLLAELGPNWGPGGPFWREHAYPTPSFFSYSYDL-----AAPPSNLVEAAIRRLFPLVRQRFPAAAAAR-------TAEWWVHLRD--SGGQHQLHYDSDEVRLV----GGGLRHPAVSSVVYL 576 + L A Y++AL L +E D +LR LG +L ++ + G + + D LPS LL + + G PFW+EH YPTPSFFSY+ L AA + L+ A R+ L FP+ + EWW H R SG HQLHYD DEV L G HP VS V+YL Sbjct: 57 ASLVAKYELALL-LSQLGRHEEADTWLRQLGLTWKLCPSVLDGSCLK--------GPTCRGEANLVAAFDDVLPSELLLLVQDAFRAGSPFWKEHKYPTPSFFSYNEPLMPDCAAATGAPLIRAVASRVKSLAVASFPSIFGTEGCERRVSSVEWWAHTRPAGSGSGHQLHYDLDEVSLPTLKEGSLPHHPLVSCVLYL 246
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: A0A812RQL1_SYMMI (P4H11 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RQL1_SYMMI) HSP 1 Score: 92.0 bits (227), Expect = 3.260e-18 Identity = 68/195 (34.87%), Postives = 88/195 (45.13%), Query Frame = 1 Query: 46 AYYQMALNGLQSKTDSDEPDVFLRMLGFKHRLSRTIFSSTAEASHPSSADSGESVAPDCAYAFCCDGALPSRLLAELGPNWGPGGPFWREHAYPTPSFFSYSYDL-----AAPPSNLVEAAIRRLFPLVRQRFPAAAAAR-------TAEWWVHLRD--SGGQHQLHYDSDEVRLV----GGGLRHPAVSSVVYL 576 A Y++AL L +E D +LR LG +L ++ + G + + D LPS LL + + G PFW+EH YPTPSFFSY+ L AA + L+ A R+ L FP+ + EWW H R SG HQLHYD DEV L G HP VS V+YL Sbjct: 38 AKYELALL-LSQLGRHEEADTWLRQLGLTWKLCPSVLDGSCLK--------GPTCRGEANLVAAFDDVLPSELLLLVQDAFRAGSPFWKEHKYPTPSFFSYNEPLMPDCAAATGAPLIRAVASRVKSLAVASFPSIFGTEGCERRVSSVEWWAHTRPAGSGSGHQLHYDLDEVSLPTLKEGSLPHHPLVSCVLYL 223
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: A0A812QR73_9DINO (Rsph1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812QR73_9DINO) HSP 1 Score: 92.0 bits (227), Expect = 3.550e-18 Identity = 68/195 (34.87%), Postives = 88/195 (45.13%), Query Frame = 1 Query: 46 AYYQMALNGLQSKTDSDEPDVFLRMLGFKHRLSRTIFSSTAEASHPSSADSGESVAPDCAYAFCCDGALPSRLLAELGPNWGPGGPFWREHAYPTPSFFSYSYDL-----AAPPSNLVEAAIRRLFPLVRQRFPAAAAAR-------TAEWWVHLRD--SGGQHQLHYDSDEVRLV----GGGLRHPAVSSVVYL 576 A Y++AL L +E D +LR LG +L ++ + G + + D LPS LL + + G PFW+EH YPTPSFFSY+ L AA + L+ A R+ L FP+ + EWW H R SG HQLHYD DEV L G HP VS V+YL Sbjct: 1164 AKYELALL-LSQLGRHEEADTWLRQLGLTWKLCPSVLDGSCLK--------GPTCRGEANLVAAFDDVLPSELLRLVQDAFRAGSPFWKEHKYPTPSFFSYNEPLMPDCAAATGAPLIRAVASRVKSLAVASFPSIFGTEGCERRVSSVEWWAHTRPAGSGSGHQLHYDLDEVSLPTLKEGSLPHHPLVSCVLYL 1349
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: A0A812YZQ7_9DINO (P4H11 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YZQ7_9DINO) HSP 1 Score: 89.4 bits (220), Expect = 3.010e-17 Identity = 67/195 (34.36%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 46 AYYQMALNGLQSKTDSDEPDVFLRMLGFKHRLSRTIFSSTAEASHPSSADSGESVAPDCAYAFCCDGALPSRLLAELGPNWGPGGPFWREHAYPTPSFFSYSYDL-----AAPPSNLVEAAIRRLFPLVRQRFPAAAAAR-------TAEWWVHLRD--SGGQHQLHYDSDEVRLV----GGGLRHPAVSSVVYL 576 A Y++AL L +E D +LR LG +L ++ + G + + D LPS LL + + G PFW+EH YPTPSFFSY+ L A + L+ A R+ L FP+ + EWW H R SG HQLHYD DEV L G HP VS V+YL Sbjct: 54 AKYELALL-LSQLGRHEEADDWLRQLGLTWKLCPSVLDGSCLK--------GPTCRGEANLVAAFDDVLPSELLCLVQDAFRAGSPFWKEHKYPTPSFFSYNEPLMPECAAETGAPLIRAVASRVKSLAVASFPSIFGTEGCGRQVSSVEWWAHTRPAGSGSGHQLHYDLDEVSLPTLKEGSLPHHPLVSCVLYL 239
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: A0A7S3M9M5_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9M5_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.070e-14 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 316 HAYPTPSFFSYSYDLA--APPSNLVEAAIRRLFPLVRQRFPAAAAARTAEWWVHLRDSGGQHQLHYDSDEVRLVGGGL-RHPAVSSVVYL 576 +A T +FSY Y L AP ++ + +FP V ++FP AA A AEWWVH R HQLH+DSDE R++ G +HP VS+V+YL Sbjct: 9 NASSTVGYFSYLYPLKERAPKCSVEQIIFNTIFPAVCEQFPQAAEANYAEWWVHSRPHSNGHQLHFDSDETRIMSGRTPQHPLVSTVLYL 98
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: A0A0M0JSE5_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSE5_9EUKA) HSP 1 Score: 72.0 bits (175), Expect = 2.160e-11 Identity = 56/157 (35.67%), Postives = 65/157 (41.40%), Query Frame = 1 Query: 112 LRMLGFKHRLSRTIFSSTAEASHPSSADSGESVAPDCAYAFCCDGALPSRLLAELGPNWGPGGPFWREHAYPTPS--FFSYSYDLAAPPSNLVEAAIRRLFPLVRQRFPAAAAARTAEWWVHLRDSGGQHQLHYDSDEVRLVGGGLRHPAVSSVVYL 576 LR GF RLS + H S + ES P A D AL W S FFSY + L P E + L + + FP A AAR EWW H R G HQLH+DSD+ GGLRHP VSS +YL Sbjct: 128 LRRGGFICRLSPAVL-----RYHESETSAPESPPPP-ELAHAVDSALAPXXXXXXXXXXXXXXXXWSXXXXXCGSSPFFSYVHPLDVAPRIGFERVLGALHAIACKHFPRARAARYVEWWAHCRPHGVGHQLHFDSDKEGE--GGLRHPLVSSALYL 276
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: K0TGI8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGI8_THAOC) HSP 1 Score: 64.3 bits (155), Expect = 1.000e-8 Identity = 52/164 (31.71%), Postives = 69/164 (42.07%), Query Frame = 1 Query: 79 SKTDSDEPDVFLRMLGFKHRLSRTIFSSTAEASHPSSADSGESVAPDCAYAFCCDGALPSRLLAELGPNWGPGGPFWREHAYPTPS--FFSYSYDLAAPP------------SNLVEAAIRRLFPLVRQRFPAAAAARTAEWWVHLRDSGGQHQLHYDSDEVRL 528 S T+ E D+ L LG++ RLS+ + S +S P A DGA+PS+L L P +W H Y F S++ L A +L E F ++ RFP A + E W H R + GQHQLHYD DEV L Sbjct: 26 SSTEETEADLVLTRLGYRLRLSKFALGYNINRTVKRVDPSRDSRRPPSAV-HAVDGAMPSKLFQSLQHALRPHSRYW-SHFYSKAGNQFASHNITLDAGDRAGSVELRLNNSKSLFEQIAIIAFQKMKSRFPQIKHATSVEVWAHKRPADGQHQLHYDMDEVLL 187
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Match: A0A7S4BYL3_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BYL3_CHRCT) HSP 1 Score: 61.6 bits (148), Expect = 8.840e-8 Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 1 Query: 442 AARTAEWWVHLRDSGGQHQLHYDSDEVRLVGGG-LRHPAVSSVVYLG 579 A AEWWVH R +G HQ+HYD DE RL G +RHP +SSV+YLG Sbjct: 211 ALEAAEWWVHTRCTGEGHQMHYDLDESRLASHGEVRHPLISSVLYLG 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1022.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1022.2.1 >prot_H-akashiwo_Contig1022.2.1 ID=prot_H-akashiwo_Contig1022.2.1|Name=mRNA_H-akashiwo_Contig1022.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=193bp MAVGILQDQVASGLAAYYQMALNGLQSKTDSDEPDVFLRMLGFKHRLSRTback to top mRNA from alignment at H-akashiwo_Contig1022:200399..200977- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1022.2.1 ID=mRNA_H-akashiwo_Contig1022.2.1|Name=mRNA_H-akashiwo_Contig1022.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=579bp|location=Sequence derived from alignment at H-akashiwo_Contig1022:200399..200977- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1022:200399..200977- >mRNA_H-akashiwo_Contig1022.2.1 ID=mRNA_H-akashiwo_Contig1022.2.1|Name=mRNA_H-akashiwo_Contig1022.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=579bp|location=Sequence derived from alignment at H-akashiwo_Contig1022:200399..200977- (Heterosigma akashiwo CCMP452)back to top |