mRNA_H-akashiwo_Contig1021.12.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: A0A8J6WTM4_9CYAN (YdcF family protein n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6WTM4_9CYAN) HSP 1 Score: 92.0 bits (227), Expect = 3.810e-20 Identity = 63/151 (41.72%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 16 AIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTR-GLTPDYNGDYGIIIDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 A+++LGG ERE+ A E +EHP ISS + + G+ PD +IIDR AVDTVTNFT K I+ V + TS YHMRRA IG I+LG++GI + + V GR ESL K VRD RA +W+ G Sbjct: 54 AVLVLGGAPEREVFAAEF----AREHPQI--SVWISSGSNPEYTEWAFAEAGIAPDR-----VIIDREAVDTVTNFTTLVDKFKAEGIDSVYLITSDYHMRRAQVIGEIVLGSRGIDFKPVSVPSGRS--PESLEKAVRDGARAILWVATG 191
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: UPI0007399A3F (YdcF family protein n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0007399A3F) HSP 1 Score: 87.4 bits (215), Expect = 2.810e-18 Identity = 60/159 (37.74%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 16 AIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYN----GDYGIIIDR-----RAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 A+++LGG KERE A E K+HPD P ++ G P+++ G+ GI +R AVDTVTNFT K I+ + + TS HMRRA+ IG I++G++GI I+ + V GR ESL KVVRD R+ +W+ G Sbjct: 56 AVLVLGGAKEREEFAAEF----AKQHPDLPI---------------WISSGSNPEFSEWVFGEAGISPNRIHRDYEAVDTVTNFTTLVDDFKAQGIDSIYLITSDDHMRRAWVIGEIVMGSRGIGIKTVAVPSGRS--PESLDKVVRDAARSILWVVTG 193
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: A0A563W5L4_9CYAN (DUF218 domain-containing protein n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563W5L4_9CYAN) HSP 1 Score: 86.7 bits (213), Expect = 3.950e-18 Identity = 57/150 (38.00%), Postives = 81/150 (54.00%), Query Frame = 1 Query: 16 AIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYNGDYGIIIDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 AI+ILGG +RE+ + +P+ P I S A D Q+ R D N Y +DRRA DTVTNFT +Q +I + + TS YH+ RA I ++LG+KGI + V + R +ES F+++RD IRA+IW+ G Sbjct: 58 AILILGGSHKRELFTAQFAHL----YPNIP---IWLSSGADDTISRQIFRDAGIDLNRVY---LDRRATDTVTNFTTLVKDFQQHKIKHIYLVTSDYHISRASAIATVVLGSKGIAFSPISVPEDRP--RESSFRIMRDTIRAFIWITTG 195
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: D8G580_9CYAN (DUF218 domain-containing protein n=1 Tax=Kamptonema sp. PCC 6506 TaxID=272129 RepID=D8G580_9CYAN) HSP 1 Score: 85.5 bits (210), Expect = 8.710e-18 Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 16 AIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYNGDYGIIIDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 A+ +LGG ERE+ A + +EHP P S + ++ G+ P+ + +D RAVDTVTNFT LK I V + TS HMRRA IG I+LG++GI + + V GR E + KVVRD +RA +WL G Sbjct: 47 ALFVLGGAAEREVFAAKF----AREHPQLPIWVSSGSNPEYAEWVF-AEAGIDPER-----LHLDYRAVDTVTNFTTLVDELKAQGIQSVYLITSDDHMRRARIIGEIVLGSRGISFKAIPVPSGR--APEPIEKVVRDGVRAIVWLTTG 184
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: A0A6J4HCW7_9CYAN (DUF218 domain-containing protein n=1 Tax=uncultured Coleofasciculus sp. TaxID=1267456 RepID=A0A6J4HCW7_9CYAN) HSP 1 Score: 83.6 bits (205), Expect = 1.010e-16 Identity = 58/150 (38.67%), Postives = 81/150 (54.00%), Query Frame = 1 Query: 16 AIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYNGDYGIIIDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 AI +LGG +ERE+ A ++ Q +HP+ P S E + I+ G+ + IDRRAVDTVTNFT L+ I+ V + TS HMRRA IG ++ G++ I I+ L V GR+ E L K +RD RA +W+ G Sbjct: 81 AIFVLGGAEERELYAAKIAQ----QHPEIPIWVSSGSSEWYTEKIFAKA-GIERKR-----LHIDRRAVDTVTNFTTLVDELQAQGIDSVYLITSDDHMRRARVIGEVVFGSRAIVIKPLSVPSGRQ--SEPLEKALRDGARAILWVTTG 218
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: A0A3M1PDJ2_9CYAN (YdcF family protein n=1 Tax=Cyanobacteria bacterium J069 TaxID=2420337 RepID=A0A3M1PDJ2_9CYAN) HSP 1 Score: 82.8 bits (203), Expect = 1.150e-16 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 4 QLKTAIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYNGDYGIIIDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 Q A+++LGG ERE A E K HPD P S + +++ G+ D + +D RAVDT+TNFT + I+ V + TS YHMRRA+ IG I+LG++GI + + V L +E+ KVVRD RA +W+ G Sbjct: 52 QKPDAVLVLGGATEREQFAAEF----AKLHPDLPIWVSSGSNPEYAEWVFEQA-GIERDR-----LSLDYRAVDTLTNFTTLVDEFESRGISSVYLITSDYHMRRAWVIGKIVLGSRGIEFKPVTVPS--TLPRETSDKVVRDAARAVLWVTTG 193
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: UPI0019F20A37 (YdcF family protein n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI0019F20A37) HSP 1 Score: 82.0 bits (201), Expect = 2.910e-16 Identity = 58/155 (37.42%), Postives = 79/155 (50.97%), Query Frame = 1 Query: 1 MQLKTAIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYNGDYGIIIDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 +Q AI++LGG+ ERE A E Q +HPD + S + G+ PD + +D RAVDTVTNFT + I + + TS YHMRRA IG I+LG++GI + V R+ ES+ K VRD R+ +WL G Sbjct: 60 LQKPQAILVLGGDIERETFAAEFAQ----QHPDLEIW-VSSGTNPEFAEWNFAEAGIRPDR-----VHLDYRAVDTVTNFTTLVDDFEAEGITSLYLITSDYHMRRAQVIGEIVLGSRGISYRAIAVPSERE--PESIDKSVRDAARSVLWLTTG 202
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: A0A2G4EY10_9CYAN (YdcF family protein n=2 Tax=Tychonema TaxID=54312 RepID=A0A2G4EY10_9CYAN) HSP 1 Score: 81.3 bits (199), Expect = 3.520e-16 Identity = 55/154 (35.71%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 4 QLKTAIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYNGDYGIIIDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 Q A+++LGG ERE+ A ++HP P S + ++ G+ D + +D RAVDTVTNFT L+ I+ + + TS HMRRA+ IG I+ G++GI + + V GR+ E L K VRD +RA +WL G Sbjct: 43 QRPEALLVLGGATEREVFAANF----ARKHPGLPIWVSSGSNREFAEWVFSEA-GIQSDR-----VHLDYRAVDTVTNFTTLVDELRDRGIDSLYLITSDDHMRRAWIIGEIVFGSRGISFKPVAVPSGRE--PEPLQKAVRDGVRAIVWLTTG 184
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: A0A6P0MHU7_9CYAN (YdcF family protein n=1 Tax=Symploca sp. SIO2C1 TaxID=2607783 RepID=A0A6P0MHU7_9CYAN) HSP 1 Score: 81.3 bits (199), Expect = 4.050e-16 Identity = 62/155 (40.00%), Postives = 77/155 (49.68%), Query Frame = 1 Query: 16 AIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYNGDYGII-----IDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 AI +LGG +ERE A + K HP+ S E Q I+ GII IDRRAVDTVTNFT L+ I+ V + TS HMRRA IG I+ G++GI +E L V GR E + K RD +RA +WL G Sbjct: 52 AIFVLGGAEERESFAAKF----AKLHPELDIWVSSGSPEWYTQKIFAKA-----------GIIQERLHIDRRAVDTVTNFTTLVDELQAEGIDSVYLVTSDDHMRRARVIGEIVFGSRGIILEPLPVTSGRS--PEPIDKSFRDGLRAILWLATG 189
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Match: UPI001A069DE2 (YdcF family protein n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI001A069DE2) HSP 1 Score: 81.3 bits (199), Expect = 4.740e-16 Identity = 56/150 (37.33%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 16 AIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIYQLTRGLTPDYNGDYGIIIDRRAVDTVTNFTRSFGILKQLEINKVIIATSKYHMRRAFWIGMIILGTKGIHIEKLEVNQGRKLGQESLFKVVRDCIRAYIWLFLG 465 A+++LGG ERE A E + HPD P S + ++ + G+ D I +D +AVDTVTNFT K I + + TS YHM RA IG I+LG++GI + +EV + E L KVVRD RA +W+ G Sbjct: 60 AVLVLGGATERERFAAEF----ARHHPDLPIWVSSGSNPEYAEWVF-TSAGIDNDR-----IHLDYQAVDTVTNFTTLADYFKTQGIESLYVITSDYHMTRARVIGEIVLGSRGIQFQPIEVPSEQS--PEPLNKVVRDAARAILWVATG 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1021.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1021.12.1 >prot_H-akashiwo_Contig1021.12.1 ID=prot_H-akashiwo_Contig1021.12.1|Name=mRNA_H-akashiwo_Contig1021.12.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=155bp MQLKTAIIILGGEKEREIKALELYQTIKKEHPDFPFKAIISSCEASDQDIback to top mRNA from alignment at H-akashiwo_Contig1021:330181..330645+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1021.12.1 ID=mRNA_H-akashiwo_Contig1021.12.1|Name=mRNA_H-akashiwo_Contig1021.12.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=465bp|location=Sequence derived from alignment at H-akashiwo_Contig1021:330181..330645+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1021:330181..330645+ >mRNA_H-akashiwo_Contig1021.12.1 ID=mRNA_H-akashiwo_Contig1021.12.1|Name=mRNA_H-akashiwo_Contig1021.12.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=465bp|location=Sequence derived from alignment at H-akashiwo_Contig1021:330181..330645+ (Heterosigma akashiwo CCMP452)back to top |