mRNA_H-akashiwo_Contig1021.11.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 421 bits (1081), Expect = 1.680e-144 Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT 627 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSP NFTLHLYHLSQIFKRMRAANLK KLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT Sbjct: 148 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT 356
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 421 bits (1081), Expect = 5.590e-142 Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT 627 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSP NFTLHLYHLSQIFKRMRAANLK KLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT Sbjct: 148 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT 356
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 357 bits (916), Expect = 5.140e-122 Identity = 170/209 (81.34%), Postives = 192/209 (91.87%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT 627 RMCLDLR+LNAITTP+KFPLPT REMFD L AYYF+SLDMLWAYWSVPLR+ DK KTAFTVRN+KYAFNVMCFGLTNAPATFSHLVNKVFQGCQ++FALCFLDDVLCY+ +F+LHL L +IF RM ANLK KLPKC+FGAAQ+PFLGH+A+REGLKPDPKKIEA++KL+RP++KKQVRQ+LGLASYYRQFVPNFA+ AAPLY LT Sbjct: 10 RMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQFVPNFAATAAPLYTLT 218
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: A0A015J1N0_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J1N0_RHIIW) HSP 1 Score: 195 bits (495), Expect = 3.330e-57 Identity = 93/208 (44.71%), Postives = 138/208 (66.35%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKL 624 R C++ + LN IT +PLP E+ D+L +A +FT+LD+ YW + +R D+ KTAF + Y F VM FGL NAPATF ++KV G + +F L +LDDV+ YS + F H+ HL ++ R+R ANL+LK KC F AA++ FLGH+ +EG+KPDP+K+ + P++ +++R +LGL SYYR+F+ +FA +A P+YKL Sbjct: 29 RFCVNYKPLNDITKKDNYPLPRIDELLDSLQDAQWFTTLDLASGYWQIKVRAEDQEKTAFITKFGTYEFKVMPFGLCNAPATFQRTMDKVLHGIKEKFVLVYLDDVIIYSKT-FKDHIQHLEEVLNRIRKANLRLKAEKCYFAAAELQFLGHVVGKEGVKPDPEKVNKMVNYPEPQNIRELRGVLGLFSYYRRFIKDFAKVADPMYKL 235
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: A0A7D9JXD8_PARCT (Retrovirus-related Pol poly from transposon, partial (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JXD8_PARCT) HSP 1 Score: 186 bits (471), Expect = 1.580e-55 Identity = 94/209 (44.98%), Postives = 132/209 (63.16%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT 627 R C+D R +N++T P+P ++ D L A+YF++LD+ YW VPLRE D+ KTAF+V Y F VM FGLTNA ATF ++ V +G + L F+DD++ +S + + H L ++F R+RAA LK+K KC F + FLGH+ S G +PDP K+EAVR P S +VR +G+ASYYR+F+ NFA IA PL+ +T Sbjct: 29 RFCVDFRRVNSVTKKDAQPMPRIDDILDQLGGAHYFSTLDLASGYWQVPLREEDREKTAFSVGVDHYEFTVMPFGLTNASATFQRMMGNVLKGIKG--CLVFIDDIIIFSET-WEEHQLILKEVFSRIRAAGLKVKREKCQFAQESVKFLGHVVSARGTEPDPSKVEAVRDFATPSSLTEVRAFIGMASYYRRFIKNFADIATPLHDMT 234
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: L7MA76_RHIPC (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MA76_RHIPC) HSP 1 Score: 198 bits (504), Expect = 4.110e-55 Identity = 97/208 (46.63%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKL 624 R C+D RALN IT +P+P + D+L A YF+SLD+ YW +P+ E DK KTAF + Y FNVM FGL NAPATF +++ V +G +++ LC+LDD++ +S S F HL L ++ + +A L+L KC F I LGH+ S++G++PDP KI AV + RPE K++R LGLASY+R+F+ +FASIAAPL++L Sbjct: 348 RFCVDYRALNKITRKDVYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPMHEDDKEKTAFATPDGLYEFNVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVIFS-STFPQHLQRLDEVLTCLASAGLQLNTKKCCFATKSIKVLGHVVSKDGIRPDPDKIAAVLRFPRPERPKELRSFLGLASYFRRFIQHFASIAAPLHQL 554
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: A0A6B0VG58_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG58_IXORI) HSP 1 Score: 197 bits (501), Expect = 5.990e-55 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKL 624 R C+D R LN IT +P+P + D+L A YF+SLD+ YW +P+ E DK KTAF + Y FNVM FGL NAPATF +++ + +G +++ LC+LDD++ +S SNF HL LSQ+ + AANL+L KC F A I LGH+ S+ G++PDP KI+AV RP+ +K+ R LGL+SY+R F+ FA+IAAPL L Sbjct: 87 RFCIDYRELNEITRKDLYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPVNEEDKEKTAFVTPDGLYEFNVMPFGLCNAPATFERMIDNILRGLKWKTCLCYLDDIVIFS-SNFEEHLERLSQVLSCLSAANLQLNTKKCTFAAKTIKILGHVISKHGIRPDPDKIKAVSDFPRPQRQKEWRSFLGLSSYFRHFIRGFATIAAPLNNL 293
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: A0A6G5A8Y6_RHIMP (Putative tick transposon (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5A8Y6_RHIMP) HSP 1 Score: 187 bits (475), Expect = 1.470e-54 Identity = 94/208 (45.19%), Postives = 133/208 (63.94%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKL 624 R C+D R LN IT +PLP + D L A +F+SLD+ YW VP+ EGD+ KTAF + Y F VM FGL NAPATF +++ V +G +++ LC+LDD++ +S S+F HL L Q+ + A L+L L KC FGA ++ LGH+ S++G+ PDP K+ AV +P + K++R +GL SY+R++V NFASI APL L Sbjct: 167 RFCVDYRRLNKITRKDVYPLPRIDDALDCLQGAEFFSSLDLRSGYWQVPMAEGDRPKTAFVTPDGLYEFTVMPFGLCNAPATFERMMDTVLRGLKWKTCLCYLDDIVVFS-SDFATHLSRLEQVLTCLSTARLQLNLKKCHFGARKLVILGHVVSKDGILPDPTKLNAVAAFPKPSTIKELRSFIGLCSYFRRYVRNFASIIAPLTSL 373
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: L7LV08_RHIPC (Putative tick transposon n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7LV08_RHIPC) HSP 1 Score: 195 bits (495), Expect = 1.820e-54 Identity = 97/208 (46.63%), Postives = 136/208 (65.38%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKL 624 R C+D RALN IT +P+P + D+L A YF++LD+ YW +P+ E DK KTAF+ + Y FNVM FGL NAPATF +++ V +G +++ LC+LDD++ +S S F HL L ++ + A L+L KC FG I LGHL +++G++PDP KI AV RP K++R LGLASY+R+F+ NFA+IAAPL+KL Sbjct: 332 RFCVDYRALNKITRKDVYPMPRIDDALDSLQGAQYFSTLDLRSGYWQIPMDEADKEKTAFSTPDGLYEFNVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVVFS-STFADHLQRLDEVLTCLANAGLQLNTKKCHFGNTTIKVLGHLVNKDGIQPDPDKISAVLNFPRPFRTKELRSFLGLASYFRRFIRNFATIAAPLHKL 538
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Match: A0A7D9J5Q0_PARCT (Retrovirus-related Pol poly from transposon, partial (Fragment) n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J5Q0_PARCT) HSP 1 Score: 187 bits (476), Expect = 4.570e-54 Identity = 96/209 (45.93%), Postives = 130/209 (62.20%), Query Frame = 1 Query: 1 RMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPSNFTLHLYHLSQIFKRMRAANLKLKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLT 627 R C+D R +N +T P+P E+ D L A YF++LD+ YW VPLRE D KTAF+V Y F VM FGLTNAPATF ++ + G + L F+DD++ +S + + H L ++F+R+RAA LK+K KC F + FLGH+ S G +PD K+EAVR+ P S VR +G+ASYYR+F+ NFA IAAPL+ LT Sbjct: 155 RFCVDFRRVNLVTKKDAHPMPRIDEILDQLGGARYFSTLDLASGYWQVPLREEDMEKTAFSVGANHYEFTVMPFGLTNAPATFQRMMGNILMGIKS--CLVFMDDIIIFSDT-WEEHQRILDEVFRRIRAAGLKIKRDKCQFAQESVKFLGHIVSARGTEPDSSKVEAVREFATPTSLTDVRAFVGMASYYRRFIKNFADIAAPLHDLT 360 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1021.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1021.11.1 >prot_H-akashiwo_Contig1021.11.1 ID=prot_H-akashiwo_Contig1021.11.1|Name=mRNA_H-akashiwo_Contig1021.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=208bp MCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLRback to top mRNA from alignment at H-akashiwo_Contig1021:294133..294759+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1021.11.1 ID=mRNA_H-akashiwo_Contig1021.11.1|Name=mRNA_H-akashiwo_Contig1021.11.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=627bp|location=Sequence derived from alignment at H-akashiwo_Contig1021:294133..294759+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1021:294133..294759+ >mRNA_H-akashiwo_Contig1021.11.1 ID=mRNA_H-akashiwo_Contig1021.11.1|Name=mRNA_H-akashiwo_Contig1021.11.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=624bp|location=Sequence derived from alignment at H-akashiwo_Contig1021:294133..294759+ (Heterosigma akashiwo CCMP452)back to top |