mRNA_H-akashiwo_Contig1021.10.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1021.10.1
Unique NamemRNA_H-akashiwo_Contig1021.10.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: A0A7S3XX48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX48_HETAK)

HSP 1 Score: 460 bits (1184), Expect = 9.730e-156
Identity = 237/240 (98.75%), Postives = 238/240 (99.17%), Query Frame = 2 
Query:    2 SVLEKTPLTPVDGVADNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAA-ELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLKQLGTSGAPKLGELRDRIRHLAA 718
            SVLEKTPLTPVDGV D+VPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAA ELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLKQLGTSGAPKLGELRDRIRHLAA
Sbjct:  358 SVLEKTPLTPVDGVPDDVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLKQLGTSGAPKLGELRDRIRHLAA 597
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: A0A835Z4H4_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H4_9STRA)

HSP 1 Score: 221 bits (563), Expect = 8.770e-64
Identity = 116/210 (55.24%), Postives = 148/210 (70.48%), Query Frame = 2 
Query:   23 LTPVDGVADNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLK 652
            LT  DGV     AFLA+G VF  GNWQHL ++L ++ GDQ+LYVGDHM+SD+LR+KRTLGWRTCL+VPE+E EI TH +   L   + +LR LQYDL+E+ D +L+ Q R R   D      L+  L+ L A +  LK ILR +   FH+ FHP WGQ+FK+GYQDSRFAQQVS Y+CLYTS+ASNL  +S +RSFR   D+  HD +L+
Sbjct:  298 LTNTDGVLGEPEAFLAQGKVFQGGNWQHLHELLRLSSGDQLLYVGDHMFSDILRSKRTLGWRTCLIVPELENEIATHNRHSELRDFINELRALQYDLDEWAD-LLRDQVRHRGEGDEEGLEHLQMELSLLVADQRKLKEILRQEGLKFHHLFHPAWGQLFKSGYQDSRFAQQVSIYACLYTSRASNLSFMSAQRSFRPVRDLAAHDQLLE 506
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: D7FMF3_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF3_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 6.570e-56
Identity = 109/211 (51.66%), Postives = 145/211 (68.72%), Query Frame = 2 
Query:   23 LTPVDGVADNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEV-LQAQRRLRPGEDAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLK 652
            L+  DGV      FLA+G VF  GNW HL  +L ++ GDQ+LYVGDHM++D+LR+KRTLGWRTCL+VPE+E E+  + + + L  +V  LR LQY L+  +D+V LQA   +  G D+ A AEL    + LE ++  LK +LR    + H +FHP WGQ+FK+GYQDSRFA QV+ Y+C+YTSKASNL  VS +RSFR   DV  HD +L+
Sbjct:  403 LSNTDGVMGTPSEFLAKGKVFQGGNWLHLHDLLTLSSGDQLLYVGDHMFADILRSKRTLGWRTCLIVPELENEMSANRENRDLRVEVNMLRTLQYHLDTRLDDVRLQA---MEEGPDSPAGAEL----SKLEEEQVQLKSLLRGNGLMLHSKFHPDWGQLFKSGYQDSRFATQVATYACIYTSKASNLARVSTQRSFRPVRDVSAHDLILE 606
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: A0A7S2EHS9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHS9_TRICV)

HSP 1 Score: 180 bits (456), Expect = 4.990e-51
Identity = 96/215 (44.65%), Postives = 136/215 (63.26%), Query Frame = 2 
Query:   47 DNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLKQLGTSGAPKLGEL 691
            D    FLA+G  F  GNWQHL  +L V  G++I+YVGDH+Y+DVLR+KRTLGWR+C +VPE+  E+    +   L R + +LR L+ +L  + D V       R  +D  +  E+ A+L  +E     +K  L    + +H  FHPVWGQ+F AGYQDSRFA  V +Y+C+YTSKA+NLGL +  RS+RT+ ++LPHD++L   G +     G+L
Sbjct:   45 DGAAKFLAQGKTFQGGNWQHLTAMLDVEAGEEIMYVGDHLYADVLRSKRTLGWRSCFIVPELAEEMRVFREQLPLRRKITELRKLRDELSLHGDAVY------RNAQDPDSP-EVEAQLFLVERDDAAVKDALTDLTERYHAAFHPVWGQMFHAGYQDSRFAYFVQNYACVYTSKATNLGLATTSRSYRTSGELLPHDNLLADDGHTDFGPGGQL 252
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: A0A6U3R2E5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3R2E5_9STRA)

HSP 1 Score: 180 bits (456), Expect = 6.880e-51
Identity = 94/201 (46.77%), Postives = 129/201 (64.18%), Query Frame = 2 
Query:   47 DNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVL 649
            D    FL +G  F  GNW HLQ +L +  G++ILYVGDH+Y+DVLR+KRTLGWR+  +VPE+  E+    +   L + + +LR L+ +L  Y D +    RR     D+    E++A+L  ++    ++K  L   A  +H  FHPVWGQ+F AGYQDSRFA  V +Y+CLYTSKA+NLGL S  RSFRT  ++LPHD +L
Sbjct:   63 DGANKFLEQGKTFQGGNWNHLQAMLEIDAGEEILYVGDHLYADVLRSKRTLGWRSAFIVPELSDEMRVFSENVPLRKKITELRKLRDELSIYGDML----RRTSADPDSE---EIKAKLQQIDEDDAVIKDTLAQMAGQYHAAFHPVWGQMFNAGYQDSRFAFFVQNYACLYTSKATNLGLSSINRSFRTGGEMLPHDRLL 256
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: W7T4C7_9STRA (Imp-gmp specific 5 nucleotidase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4C7_9STRA)

HSP 1 Score: 185 bits (470), Expect = 8.560e-50
Identity = 102/228 (44.74%), Postives = 146/228 (64.04%), Query Frame = 2 
Query:   23 LTPVDGVADNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQA----QRRLRPGEDAAAAAE-------LRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLKQLGTSGA 673
            L  VDGV   V AFLA+G VF  GNW+HL ++L +  GD +LYVGDHMYSD+LR+KR+LGWRTCLV+PE+  E+    +   L   +++LR  +  ++E +D + ++    +R  + G    A+ E       L  +L +LE     L   ++A    +H++FH VWG++F++G+Q+SRFA+QVS Y+C+YT KASNLG+VS  R FRT  D +PHD V   LG  GA
Sbjct:  348 LRNVDGVEGPVDAFLAQGKVFQGGNWKHLLEMLKLTSGDNVLYVGDHMYSDILRSKRSLGWRTCLVIPELAGEVAALQQYAGLDAGLQELRRRRLVMDEEMDSLYKSIQVLRREEKQGAQGGASTEPSPELKKLTRQLQELEEAGERLDDTIKAGCSDYHHKFHRVWGKLFESGFQESRFAKQVSTYACVYTKKASNLGMVSPERWFRTVRDSMPHD-VYLALGLGGA 574
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: A0A7S4UXX4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UXX4_9STRA)

HSP 1 Score: 180 bits (456), Expect = 7.320e-49
Identity = 94/201 (46.77%), Postives = 129/201 (64.18%), Query Frame = 2 
Query:   47 DNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVL 649
            D    FL +G  F  GNW HLQ +L +  G++ILYVGDH+Y+DVLR+KRTLGWR+  +VPE+  E+    +   L + + +LR L+ +L  Y D +    RR     D+    E++A+L  ++    ++K  L   A  +H  FHPVWGQ+F AGYQDSRFA  V +Y+CLYTSKA+NLGL S  RSFRT  ++LPHD +L
Sbjct:  249 DGANKFLEQGKTFQGGNWNHLQAMLEIDAGEEILYVGDHLYADVLRSKRTLGWRSAFIVPELSDEMRVFSENVPLRKKITELRKLRDELSIYGDML----RRTSADPDSE---EIKAKLQQIDEDDAVIKDTLAQMAGQYHAAFHPVWGQMFNAGYQDSRFAFFVQNYACLYTSKATNLGLSSINRSFRTGGEMLPHDRLL 442
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: A0A7S2UFD4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFD4_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.050e-48
Identity = 97/224 (43.30%), Postives = 142/224 (63.39%), Query Frame = 2 
Query:    2 SVLEKTPLTPVDGVADN-VPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPG--EDAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLKQLGT 664
            S+L    L  ++ + +N    FLA G  F  GNWQHLQ +L +  G+++LYVGDH+Y+DVLR+KRTLGWR+  +VPE+E E++   +   L + + +LR L+ +L  Y D        LR G  ++  +  ++   L  L+     +K +L   A+  H  FHP+WGQ+F AGYQDSRFA  V +Y+C+YT+KA+NLGL S  RSFRTT+++LPHD +L   G+
Sbjct:  424 SLLNTDGLFEIEALGENGADKFLALGKTFQGGNWQHLQAMLEIDAGEELLYVGDHLYADVLRSKRTLGWRSAFIVPEIEQEMKVFNEQLPLLKQITELRTLRDELSAYGDS-------LRKGAVDEGMSKQDVERALTKLDEDDSKIKTVLTTLAEQHHAAFHPIWGQMFHAGYQDSRFAYFVQNYACVYTAKATNLGLASISRSFRTTAELLPHDKLLADEGS 640
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: A0A7S1ZFY4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFY4_TRICV)

HSP 1 Score: 180 bits (456), Expect = 1.520e-47
Identity = 96/215 (44.65%), Postives = 136/215 (63.26%), Query Frame = 2 
Query:   47 DNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVLKQLGTSGAPKLGEL 691
            D    FLA+G  F  GNWQHL  +L V  G++I+YVGDH+Y+DVLR+KRTLGWR+C +VPE+  E+    +   L R + +LR L+ +L  + D V       R  +D  +  E+ A+L  +E     +K  L    + +H  FHPVWGQ+F AGYQDSRFA  V +Y+C+YTSKA+NLGL +  RS+RT+ ++LPHD++L   G +     G+L
Sbjct:  419 DGAAKFLAQGKTFQGGNWQHLTAMLDVEAGEEIMYVGDHLYADVLRSKRTLGWRSCFIVPELAEEMRVFREQLPLRRKITELRKLRDELSLHGDAVY------RNAQDPDSP-EVEAQLFLVERDDAAVKDALTDLTERYHAAFHPVWGQMFHAGYQDSRFAYFVQNYACVYTSKATNLGLATTSRSYRTSGELLPHDNLLADDGHTDFGPGGQL 626
[Close]
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Match: A0A7S4VG98_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VG98_9STRA)

HSP 1 Score: 180 bits (456), Expect = 3.110e-47
Identity = 94/201 (46.77%), Postives = 129/201 (64.18%), Query Frame = 2 
Query:   47 DNVPAFLAEGAVFHMGNWQHLQKILGVARGDQILYVGDHMYSDVLRTKRTLGWRTCLVVPEMEAEIETHLKAQTLSRDVKDLRNLQYDLEEYVDEVLQAQRRLRPGEDAAAAAELRARLADLEAQKGILKRILRAKADLFHYQFHPVWGQIFKAGYQDSRFAQQVSDYSCLYTSKASNLGLVSRRRSFRTTSDVLPHDHVL 649
            D    FL +G  F  GNW HLQ +L +  G++ILYVGDH+Y+DVLR+KRTLGWR+  +VPE+  E+    +   L + + +LR L+ +L  Y D +    RR     D+    E++A+L  ++    ++K  L   A  +H  FHPVWGQ+F AGYQDSRFA  V +Y+CLYTSKA+NLGL S  RSFRT  ++LPHD +L
Sbjct:  486 DGANKFLEQGKTFQGGNWNHLQAMLEIDAGEEILYVGDHLYADVLRSKRTLGWRSAFIVPELSDEMRVFSENVPLRKKITELRKLRDELSIYGDML----RRTSADPDSE---EIKAKLQQIDEDDAVIKDTLAQMAGQYHAAFHPVWGQMFNAGYQDSRFAFFVQNYACLYTSKATNLGLSSINRSFRTGGEMLPHDRLL 679
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1021.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XX48_HETAK9.730e-15698.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z4H4_9STRA8.770e-6455.245'-nucleotidase n=1 Tax=Tribonema minus TaxID=3033... [more]
D7FMF3_ECTSI6.570e-5651.665'-nucleotidase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A7S2EHS9_TRICV4.990e-5144.65Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U3R2E5_9STRA6.880e-5146.77Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
W7T4C7_9STRA8.560e-5044.74Imp-gmp specific 5 nucleotidase n=3 Tax=Monodopsid... [more]
A0A7S4UXX4_9STRA7.320e-4946.77Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2UFD4_9STRA2.050e-4843.30Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1ZFY4_TRICV1.520e-4744.65Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4VG98_9STRA3.110e-4746.77Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1021contigH-akashiwo_Contig1021:223138..230504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size1111
Hectar predicted targeting categoryother localisation
Exons6
Cds size951
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1021.10.1prot_H-akashiwo_Contig1021.10.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1021 223138..230346 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387053.8877625-CDS-H-akashiwo_Contig1021:223137..2232521681387053.8877625-CDS-H-akashiwo_Contig1021:223137..223252Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1021 223138..223252 +
1681387053.8996465-CDS-H-akashiwo_Contig1021:223475..2236251681387053.8996465-CDS-H-akashiwo_Contig1021:223475..223625Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1021 223476..223625 +
1681387053.9085958-CDS-H-akashiwo_Contig1021:224278..2244371681387053.9085958-CDS-H-akashiwo_Contig1021:224278..224437Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1021 224279..224437 +
1681387053.917841-CDS-H-akashiwo_Contig1021:225173..2252871681387053.917841-CDS-H-akashiwo_Contig1021:225173..225287Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1021 225174..225287 +
1681387053.9273586-CDS-H-akashiwo_Contig1021:225890..2259951681387053.9273586-CDS-H-akashiwo_Contig1021:225890..225995Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1021 225891..225995 +
1681387053.9378042-CDS-H-akashiwo_Contig1021:230038..2303461681387053.9378042-CDS-H-akashiwo_Contig1021:230038..230346Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1021 230039..230346 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387053.9588425-UTR-H-akashiwo_Contig1021:230346..2305041681387053.9588425-UTR-H-akashiwo_Contig1021:230346..230504Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1021 230347..230504 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1021.10.1

>prot_H-akashiwo_Contig1021.10.1 ID=prot_H-akashiwo_Contig1021.10.1|Name=mRNA_H-akashiwo_Contig1021.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=317bp
ERAGEDAADAGGRRGGQRARLPGRGRRVPHGQLAAPAEDPRRGPRGPDPV
RGRPHVLGRAAHQADPGLAHLPGGARDGGRDRDAPQGADAEPRREGPAQP
AVRPGGVRGRGAAGPAAAAPRGGRRRRRRAPGAPRRPGGAEGHPEAHPAG
EGGPLPLPVPPRVGPDLQGRLPGLALCPAGQRLLVPLHQQGLEPGPGLAA
ALLPHHLGRPAPRPRAEAAGHQRRPQAGGAPGPDPPPRRRRRRRRRGGGR
GGGGRALLPPLFLVVVVGGGGQQVVGAAASAREQRWKGKKKRCSLAFWVA
DGWLSRCTPLEESRGG*
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mRNA from alignment at H-akashiwo_Contig1021:223138..230504+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1021.10.1 ID=mRNA_H-akashiwo_Contig1021.10.1|Name=mRNA_H-akashiwo_Contig1021.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=7367bp|location=Sequence derived from alignment at H-akashiwo_Contig1021:223138..230504+ (Heterosigma akashiwo CCMP452)
GAGCGTGCTGGAGAAGACGCCGCTGACGCCGGTGGACGGCGTGGCGGACA
ACGTGCCCGCCTTCCTGGCCGAGGGCGCCGTGTTCCACATGGGCAACTGG
CAGCACCTGCAGAAGGCGAGGAGACCCAAAACCCTTTGCTGCCCCCGCCC
GATCCCTCGGCGGGCTCGATTCATTTTTGGAAGGGCAGCTGATTTTCACG
CACCATCTTACTTGCATTCATTAAATATTATACCATTAAATGGATACGGA
AGATGATCTGAAACGCAGCACCAAGGGTCCGGAACTGTGTGGAAACGCCG
CGGCGGGCGGCGGCGGGCGGCGGCGGCGGCGGGGGCAGATCCTCGGCGTG
GCCCGCGGGGACCAGATCCTGTACGTGGGCGACCACATGTACTCGGACGT
GCTGCGCACCAAGCGGACCCTGGGCTGGCGCACCTGCCTGGTGGTGCCCG
AGATGGAGGCCGAGATCGAGACGCACCTCAAGGCGCAGGtGGGGGGCGGG
GCGGGGGGCGGGCGGGGCCCCGGCGTgggggGGGGGCGGGGTTCCGTGCG
GAGGGAGGCTGGGAGGAGGGAGGCGGCCAGGATCGAGACGCACCGCGGGC
GGCTGGACCTGGAGGGGGAGGGGGAGAGGCCCTGGCGTGTTCTCCAGCCC
CAGGAAAAAATCAAGCAGGAGAAGGGCAGCTGTGTTTTGTAATGCACAGT
TGTTTATTTCAATGCAAGGGTGGATGATGGGAGCAAGGGCACTGGCACCT
TCTCCAACCGGTATATGTTGTTGTTGTTGTTGTTGTCTATTGTTGGTTTC
TCAATGTTTATCTGTATGTAGTTATCAACATGTATATCTATAGAATGCCC
CCCCGGCATTGTACATTAATGGTTTACTTGTTGTGCAAAGGCGGCTGGAA
CACTCGAGGGCAAAAGGCGCCGAAGCGATGAGGTTGAGGGAGCACAGCTC
AGGGGGGGCGCGACGGAGGAAGACCCAACCCCGGCGCGGGGGACGCGGCG
TGGTGGTGTAGCACCCAACCCCGGGCGCTTTCCCTCCCATTCCAGTACAA
TCGCATCCCTCCTCGAGCACCCCCCCCTCCTCCTGCCCCCCGCCCCGCCC
GCGCCCCCGCGCCGCCCGCCCCGCCCGCCCGCCCCAAGCAGACGCTGAGC
CGCGACGTGAAGGACCTGCGCAACCTGCAGTACGACCTGGAGGAGTACGT
GGACGAGGTGCTGCAGGCCCAGCGGCGGCTGCGCCCCGGGGAGGACGCCG
CCGCCGCCGCCGAGCTCCGGGCGCGCCTCGCCGACCTGGAGGCGCAGAAG
GTGCGGGGTCGATCCGGAACCTCTGGAggggggcgGGGGGGGGGGAGTAT
TCCGGAACCTCCcgCGGGGGTCCGGACCGGTCTGGGACCGCCCGCCGAAC
GTGGCAGGGCGGGGGTTCGAAGCCGATCGTCGGGACTCGGAAGGGCGGGG
GTTCAGAGCCAATCATCGCCCGGCTCCCTCTGCCGCGGGAAGTGTCCGTG
GGTGGGTGTTTCCGGGCTGGGGAAAGAGACTGTGTGGTACTTCGCTGATT
CGTCCGCATGAGTTCATTATCAATCGTGAGGGATTCCCTTTTGAAATACA
CTGCGATATTGGGAGAAGGGGAAAAAAGGGGGCGACTGGCGACCGCCATG
CGATGGCAGAAGAAGGGGTGCGGGGGCATGCTGTTGAACACCACCGCTGT
ATTATGCGTGTTTCCGCATTGTGCTACGGGTTTGGCGGGGCTCTGCCGGG
ACGGGGACGGTGCGCAAGAGCTGGGTGGCTGGCGGTTTTTTTGGGGGGGT
GCCGGGTCTTGCCGGATTCAGCTGTTTTATGCGGGGGATACCGAAACAGC
GCTCGGCAACTAGATACAGCGGCGGTGGGGTCTGTTCTCCCCGCACTCTG
CCCCCCCCCGCTGTTGCGGGAGGGGGGTAAGTGGTGGAAAGCGGCGCTGT
GCCTGAAATCCGTGCATCGCAGGAAACTTTGGCCTCGCCGCCCCTCCCCC
TTGCCGCCGCCGCCGCCGCCGCCCGCCGCCCCCCAGGGCATCCTGAAGCG
CATCCTGCGGGCGAAGGCGGACCTCTTCCACTACCAGTTCCACCCCGTGT
GGGGCCAGATCTTCAAGGCCGGCTACCAGGACTCGCGCTTTGCCCAGCAG
GTTCACCCTCCTCTTCTTCCCCCTCCTCCTCCTCCTCCTCCTCCCCTGGG
CTAACCCCCCCCCCCCCTCGGACCCCGCCACCGCTGCTGCTGCTGCTGCC
GCCGCCCCCGCTGCCGCTGCCGTCCTGGCTGCCTACACAAGAGGACAACA
TCAACTGCCATCTTGGCTGCCGACACAAGGGGACAACATCAAGGGAGCAG
AAGGAGGGGGGGAGTAAAGCCTGGGCTGGGGTGTAGACCCACATGGGCCA
ATGCGCACTTGCTTGATGATGATAAGTCGATAGCAGCTGTGTTGCTGTGC
GTATGGTGGTATGCGCTATGCACACTGTATGCACTGGCACTGCCTTGCGG
TGTGACTTGTGAGGCGTGGGTGAAGGGATAGGAAGGATGGGACCTGATAG
TAGTATGTAGTTACTCAGTACAAACAAACACACAGAACCCACACGTGCAC
GCACGCACAAATCTGTGCTTGTGCACTTGTTCGGTTCGCACACCTTCTGT
GCGACACGCTCCATGTGTCCAACACGACCCTCGCACCTGCCACAAGCGGC
GTGATGCCTTGCGAAAGCAAATGCGTCGGCCCCCTCCGCCCCCGCCGCCG
CAGGTCAGCGACTACTCGTGCCTCTACACCAGCAAGGCCTCGAACCTGGG
CCTGGTCTCGCGGCGGCGCTCCTTCCGCACCACCTCGGACGTCCTGCCCC
ACGACCACGTGGGAGGCCCTCCCCcccaCCCCCCGCCACCATGGGGTCCC
CACCCTTTCTCTATACCCTCCCCTGTTGCAGTGTCTTGAGATTGCATCTT
TCTCCTTCGTTTTTCCTAAATGGGGTAAAAGAAAACGCTAAAGGGGTAGA
ATTTTCTCTGAAATTGTTAAATTACAAGTATTTTGCCAAAAAAAAAGGCA
CCTTTTTGACCTGTCAAGACACAAAAATGAGCGCCAAACGCGTATGTTCA
GCGCAATGCATTAGGGGGAAGAAAATAGCTCAAGTTGTTGTATAAAAATC
CCAAACCCAAATTTTACTGCTCAAAAGCCCTTTGGGGGGGTATTTCGAGC
TTCATCTCCATGAAAGGAGTTTGTGCAGTCAAAAAAAGCATGTGAAGCTC
ACTTAAGATCCAAGGATGCCTCCGCCATCTTCAACGTCATCAGCCTTGAG
TTCAAGATAGGGCACTTCACACCAAAAAAGACTATAAACTACATTCGCCC
CAAGGCCAAAGGCCCTGAGGCCTTACACTCTTTTGTAATGTCCACCCAGA
GGGAAAATCCCTCTTCCAAATGAGTGCCAGACAGCCATGCACGTTTAACA
CTCAAATACCAAACCCCATTCCCTTGCACACCTGGAGAAAATAATCCAGA
GACAGGTGCAGTTAGCTTCACGTGCATGAAAAGAAACCTTAACCCTTCGT
GCTCCCTGGTGTGTCCATGATGGTCTTTCCAAAAACCATTTGTTACTTTA
ATTCATCCTTTTCAAAAATATAAAAAGCAATCATTTCGGTGAGACGCGTC
ACAACTACGTATATGATGCGCAAAATGCTTGAATCTATTGAAGAGAGAAG
AAGCGTCAGTTGAGAGAGAAGAAGAGAGAAGAAGCGTCAATTGAATTATT
TTTTGCCGACAAGCATTCTTCATGAGTTTTATTTTTTCATCGTCAAGTCT
GCAATTTCAAATTCAAATGGGACGCATAACGTCAAAATAACTTAGTTATA
TCGTAAGTATTTAAGTTATGAGACGAAACAAAAAAAAATGTCTTTTTTTA
AAAGAAAATAACCCCCAATCTCATATAGTCGGGGAAGGCCCCAGTCAAGT
TTAAAAACGAACGCCGGTCTTTGCGTTGGTCTTCTTGTCCTCCTTTTGAT
TTTTCGGCGGTTTCAGATCGAGTCGCTCTCTATGTCGGCTCTTGTCTTTT
TGTGGGGCCCCGGGAAAAGCTTGTGCGGGAACAGAATTCGAAAATAATTT
GAAAATAATTCGTTTTCACTATCTACTCATTTCTGTGCTTTTCGTATGAT
TTCTTTACTATTGTTGTTCTTACTTTCGGCTCCGTGATGATGATGATGGC
TTCCCTATTCATGGAAGTCTGCACCATATAGCTGTTGACGTTTCTTTGCG
TACGCACATACTTGTCATTGTTGAAGTTTGGTTGGGTTTCCCCTGCTTAC
GTGGCTAGTGACTAGCCAGAAAGCATTATTTCAATGATAAAGCTTTATTT
TTCTTTGGCCAAGACTTATGATGGTTGAGTTTGATTGGTTGTTGTTGTTC
TGCTTCTTCTTGATTGGATGACTGTCAGTAGCAGAGGCCCCTGTGGGGCT
GAAATTGGGCCATTCCCAAGACAAAAATTATGTATTTTCAACAAAACTTC
ACCTAAATATAGATTTTTTTTCCAAATTTTTGGTCTTTTCAGATCCAAAA
TTGATTACAATCTCATGGAGATATGGCCGTCTGAAGTTTAACTCCCCTTA
TTTTTTTTTGCCCTTTATGAAAAAATCGGGTCAATGGAAGGAGCACGAAG
GGTTAACCAGGTGGAACCTGAGGGCAAGACATACACTAAAAGCGAAACAG
AGCGCCAAATAGGCTTAAAAAGCACGAAAGCAATGACGTGCAATGGCATG
CTGGCGAGCCCCATCGATCTACCAATAAGCGAGACAGCACTATAGCTCCT
TGAGACAAATGGCAGAAAGCAGGAGAAGGAGCAAGGTAAAAACACAAGCA
CAAAATGGGGGGAGAAGGGTAAGAGCAGCAGCCGGGCAAGGAAAGGAAAA
CAGCGAAGTCAAGGATAACATTCAGTGACAGATAATAATAAAAGAAATCG
GCAGAAGAAGTAATAAGTGTCTTCTTCCAAAACGGTGCCCACCAGAACAC
ACATATAGCAGGGAAAGGAAGCAGACGAGTCAAAAACAGTCTGACTCGCA
TTTAGGGCGACTTGGCTTACACCCGTGCCCGAGCGAAGCGCCAAGCTTCC
CGGGGCCCGGGCTGCGCCTGAAAAGGGAGACGGAACGAACCCAACTCCCT
GGCCAGGAGACAGCAGTGAGAACAGCATACAGGAATGTACTCCACAGCAT
CCAGAGTCGGTCATCTTGGCACCCGCCCTTCACACACACCAGGCATCGCG
TATACGGTGCACATCCACGACGAGAAAATCTCGGCACCAGGAGGGTAACC
AGCTGATATACCGTGGTAACCTCCCAACGGGCCGCCGCCCGGTCGGCGCG
GCGCAGGTCTGCAGTGCATCCCAATGCTTTGCACCTTGTCATAACCCCGC
GGGCGGGCCGCGACAAAGGGGAAAAGTTAAGATCTTGGCTTTGACTACAA
ATCCTTATAAAATGATACACAACACAATTTATTCAGATTTGGTATACGTG
ACATACACAATTCCTCATAAAATGCGCAAATTAACGAAAATTTTCCAAAA
ATGACCCTTTGTCGACCTCCTTTAGCGTTTTTTACCAAATATATTCATGA
TCATACACTACCAGAATCATCAATACACCATAACGCATTAACCTTGTAAT
ATTATTTATATTGAACAGCCTTGACCATGAAGCTCTCCAATAGTAGTGTA
CAGAGGATTTCATCCCATAGACGGTTTTCTTGGTCCGGGGACGGGGACTG
TGCGTGGTGGTTGGGTTTTTTGTTGTGCCGTGATCGCCGAAAGGATGTTA
TTTCGTGATGGCTGCTGCCACGTCCATTTTTTCATCTCCTGGTTTTTTCA
ACATGCAGTTGCCATTTTTGGATGAGTGGTTTCTGCTGCTTTATGATTTT
TTTTTAGTCGCTGATTTTTTGGCTCTGGTGCTTCGATTGGGTATATATTT
CTTCAATCCGTTCTTTTTTCTTCTTTCTTTTTGTTAGTTAGGAGGCGGTA
GGTTTGCGCCATTTTGTTGCGTCAGGCATGAATTAACTCGATTTTGAGTT
TTGGAATTGTTAGTGATCTGTCTTAGGCGTGAATGAATTTGATGTTGAGT
TTTTGAATTCTATGAATTCCGAACTGTATATTCTTTGAAATGATCGGGAA
ATAATCTCGGTCATCAGTGTTCCTTTCGTTCCTTTTGGGATCGCTGGGAA
AATACGATTGGTTTATATTTGTGATCAGCGTTAGAGTACGTCAGTATTTT
CACATTGAAGTTCATGATTTTTGCGCGAAGCAGATGCCGGGCGGTTGAGT
CACATCATCCATCAATCGGATTGGCCCAAGTATTTTTCTGAGAGATTTAG
GTTGGCCAATGATTGCGACACGTTTGAACAAACAGATCCGCGGAAGAATG
AAAAACTCTCGACTCTACCATTCAGACTATTTTGAACTGCCTAGACGACG
ATTCGCTCCACTTTCAGGGCTGTTGGGATTGGCTACAATCACTCAAGACT
CTGAAGTGTTGAGCGATTACGGGATTTCAATTTTTTCAAATTTTCTCAAA
TCAATGTTTTGCCATTTTCATTGGTCAAAGATAGAAACATACATACACAC
ACACATTTGTTCAGGCGGCTCTTCCAGAGTTCCCATCCTTCCGTTTCCGC
ATCGGGGTTCTTCATTTTTGGCGGGCGACGGCACCCTGTTTCAATCTGGT
AACGGCACTTGTAAATATGTTAATATGTGCTGCTACCCCACCCCTCCTTG
CCCCCTCCTCCCTCCAGTTACTTTACCCCTCAAGTTTCTTTCTAGATTGT
GCTCACCTTTTCGCATCCTAACTTGCAACCTGCTCCTCTCGCATCCTGAG
CCACACCCACGGACGTCCTCACCGCATCATAATAACGACACCCCCTACCA
GGTGCTGAAGCAGCTGGGCACCAGCGGCGCCCCCAAGCTGGGGGAGCTCC
GGGACCGGATCCGCCACCTCGCCGCCGCCGCCGCCGCCGCCGCCGCGGGG
GGGGGCGGGGAGGAGGCGGGCGAGCCCTCCTCCCCCCCCTCTTCCTCGTA
GTAGTAGTAGGGGGAGGGGGACAACAGGTGGTGGGCGCTGCCGCCTCCGC
CAGAGAGCAGCGATGGAAGGGGAAGAAGAAGAGGTGTTCTCTTGCGTTCT
GGGTGGCTGACGGGTGGCTCAGCCGCTGCACGCCACTGGAAGAAAGTAGA
GGGGGGTGAAAGGAGAAGAAAAAGAGTACAGCAATGGGAGAAGAAGGAGG
ACGGCCGCTCGCTTGGGAAATCATCCAACACTGAGGCCTCGCAGCAGCCA
CATGACTGCTGCCATACTACGCATTGTTGTACTAGTAGGTTTTTTGTCTG
CCATTATTTATAAGCCA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1021:223138..230504+

>mRNA_H-akashiwo_Contig1021.10.1 ID=mRNA_H-akashiwo_Contig1021.10.1|Name=mRNA_H-akashiwo_Contig1021.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=951bp|location=Sequence derived from alignment at H-akashiwo_Contig1021:223138..230504+ (Heterosigma akashiwo CCMP452)
GAGCGTGCTGGAGAAGACGCCGCTGACGCCGGTGGACGGCGTGGCGGACA
ACGTGCCCGCCTTCCTGGCCGAGGGCGCCGTGTTCCACATGGGCAACTGG
CAGCACCTGCAGAAGATCCTCGGCGTGGCCCGCGGGGACCAGATCCTGTA
CGTGGGCGACCACATGTACTCGGACGTGCTGCGCACCAAGCGGACCCTGG
GCTGGCGCACCTGCCTGGTGGTGCCCGAGATGGAGGCCGAGATCGAGACG
CACCTCAAGGCGCAGACGCTGAGCCGCGACGTGAAGGACCTGCGCAACCT
GCAGTACGACCTGGAGGAGTACGTGGACGAGGTGCTGCAGGCCCAGCGGC
GGCTGCGCCCCGGGGAGGACGCCGCCGCCGCCGCCGAGCTCCGGGCGCGC
CTCGCCGACCTGGAGGCGCAGAAGGGCATCCTGAAGCGCATCCTGCGGGC
GAAGGCGGACCTCTTCCACTACCAGTTCCACCCCGTGTGGGGCCAGATCT
TCAAGGCCGGCTACCAGGACTCGCGCTTTGCCCAGCAGGTCAGCGACTAC
TCGTGCCTCTACACCAGCAAGGCCTCGAACCTGGGCCTGGTCTCGCGGCG
GCGCTCCTTCCGCACCACCTCGGACGTCCTGCCCCACGACCACGTGCTGA
AGCAGCTGGGCACCAGCGGCGCCCCCAAGCTGGGGGAGCTCCGGGACCGG
ATCCGCCACCTCGCCGCCGCCGCCGCCGCCGCCGCCGCGGGGGGGGGCGG
GGAGGAGGCGGGCGAGCCCTCCTCCCCCCCCTCTTCCTCGTAGTAGTAGT
AGGGGGAGGGGGACAACAGGTGGTGGGCGCTGCCGCCTCCGCCAGAGAGC
AGCGATGGAAGGGGAAGAAGAAGAGGTGTTCTCTTGCGTTCTGGGTGGCT
GACGGGTGGCTCAGCCGCTGCACGCCACTGGAAGAAAGTAGAGGGGGGTG
A
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