mRNA_H-akashiwo_Contig102.10.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: A0A836C8I9_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I9_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.290e-45 Identity = 82/150 (54.67%), Postives = 108/150 (72.00%), Query Frame = 3 Query: 123 PSAIEEEDDAHDSEDEDNVLTPGQIINNYSFLDGAFKMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 P AI EE D+ DSE+E + I +++ DG FK+V VN +LKMGKGK+AAQC HATLG Y A++H+P+ VK WE++ Q KI VKCP+ ++ + KA AAGL+TY+V DAG TQI +GS+TVL IGPAPE AF G++DH KL+ Sbjct: 54 PLAIREEVDSSDSEEEAGSVDQ---IRDWTIDDGPFKLVLVVNSELKMGKGKVAAQCCHATLGCYKTARRHAPNCVKSWEYLAQAKICVKCPEESEMWQIREKAEAAGLVTYMVADAGRTQIPSGSRTVLGIGPAPETAFLGITDHLKLM 200
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: A0A7S0XWF5_HEMAN (Aminoacyl-tRNA hydrolase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWF5_HEMAN) HSP 1 Score: 155 bits (391), Expect = 2.940e-43 Identity = 81/123 (65.85%), Postives = 93/123 (75.61%), Query Frame = 3 Query: 204 NYSFLDGAFKMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 ++S +DG KMV VN +LKMGKGKIAAQCGHATLGAY KK SP ++ WE +GQ KI V+CP ++ E KARA GLITY V DAG TQI AGS+TVLAIGPAPE AF GV+DHFKLL Sbjct: 12 SWSVVDGPGKMVLVVNQELKMGKGKIAAQCGHATLGAY---KKASPQVLRMWEGLGQAKICVQCPTEAEMHEVADKARAKGLITYQVTDAGRTQIPAGSRTVLAIGPAPESAFKGVTDHFKLL 131
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: D7FWG4_ECTSI (Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG4_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.080e-42 Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 3 Query: 162 EDEDNVLTPGQIINNYSFLDGAFKMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 E+E+ L +S DG FK+V VNM LKMGKGK+ AQC HATLG Y +++H PSA++ WE +GQ KI VKCP +L + +AKA++AGL+ Y+V DAGHTQIAAGS+TVLA+GPAP AF G+S H KL+ Sbjct: 26 EEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKVVAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQSAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: L1JZ89_GUITC (Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JZ89_GUITC) HSP 1 Score: 149 bits (375), Expect = 3.970e-41 Identity = 74/112 (66.07%), Postives = 87/112 (77.68%), Query Frame = 3 Query: 237 VFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 V VN +LKMGKGKIAAQCGHA LGAY + KK++PSA+ WE GQ KI V+CP D++ E KA A GLITY+V DAG TQIAAGS+TVLAIGPAPE+ F G++DH KLL Sbjct: 1 VLVVNQELKMGKGKIAAQCGHAVLGAYKRGKKYAPSALTWWEKFGQAKICVQCPTEDEMWEIAKKAGAKGLITYIVMDAGRTQIAAGSRTVLAIGPAPEQQFKGLTDHLKLL 112
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: A0A4D9CQR3_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQR3_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.590e-39 Identity = 80/154 (51.95%), Postives = 103/154 (66.88%), Query Frame = 3 Query: 129 AIEEE-DDAHDSEDEDNV-----LTPGQIINNYSFLDGAFKMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 A+EEE D+ DSE D +T + I ++ + G FKMV CVNM+L MGKGKIAAQCGHATLGAY +A++ +P ++ WE++GQ KI +K PD +L + A LI+Y V DAG TQIAAGSQTVLAIGPAP + ++ H KLL Sbjct: 17 ALEEEADEGSDSERSDTEESADGMTSAKTIRDFPLVSGPFKMVLCVNMELSMGKGKIAAQCGHATLGAYKRARRLAPRTLQGWEYMGQAKICLKVPDQAELERLRVLVKKAHLISYQVEDAGRTQIAAGSQTVLAIGPAPVQEIDRITGHLKLL 170
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: A0A7S3MCE7_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE7_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.360e-38 Identity = 74/126 (58.73%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 195 IINNYSFLDGAFKMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 I+N+Y+ DG FK++ CVN L MGKGK+AAQC HATLGAY A K+ +AV+ WE GQ K+AVK ++ + +AKA AAGL+TY V+D G TQIAAGS+TVLAIGPAP AF G++ H KLL Sbjct: 62 ILNSYTEEDGPFKLILCVNNSLSMGKGKVAAQCCHATLGAYKIAIKYCQTAVENWEDDGQAKVAVKVDTEAEMADLQAKAMAAGLVTYFVQDEGRTQIAAGSRTVLAIGPAPAYAFQGLTSHLKLL 187
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: W7T265_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T265_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.050e-37 Identity = 72/131 (54.96%), Postives = 92/131 (70.23%), Query Frame = 3 Query: 180 LTPGQIINNYSFLDGAFKMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 +T + I ++S + G FKMV CVNM+L MGKGKIAAQCGHATLGAY +A++ +P ++ WE++GQ KI +K PD +L A LI+Y V DAG TQIAAGSQTVLAIGPAP + ++ H KLL Sbjct: 85 ITSAKTIRDFSLVSGPFKMVLCVNMELSMGKGKIAAQCGHATLGAYKRARRLAPRTLQGWEYMGQAKICLKVPDQVELERLRVLVTKAQLISYQVEDAGRTQIAAGSQTVLAIGPAPVQEIDRITGHLKLL 215
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: A0A8J9X121_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X121_PHATR) HSP 1 Score: 138 bits (347), Expect = 6.180e-37 Identity = 69/114 (60.53%), Postives = 81/114 (71.05%), Query Frame = 3 Query: 231 KMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 KMVFCVN +L MGKGKIAAQC HA +G Y +A K P+AV WE G KIA+KCP D + + ARA G+ TY+V DAG TQIAAGS+TVL +GPAP F GVSDH KL+ Sbjct: 1 KMVFCVNTNLSMGKGKIAAQCCHAAVGCYKRATKQCPAAVHAWEQTGCAKIALKCPSPDDMEQIAVIARAKGIPTYLVEDAGRTQIAAGSRTVLGLGPAPVSVFEGVSDHLKLM 114
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: K0SKQ3_THAOC (Aminoacyl-tRNA hydrolase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKQ3_THAOC) HSP 1 Score: 140 bits (352), Expect = 9.750e-37 Identity = 74/144 (51.39%), Postives = 94/144 (65.28%), Query Frame = 3 Query: 141 EDDAHDSEDEDNVLTPGQIINNYSFLDGAFKMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 ED+ DS+D D + + D +KMV CVN L MGKGKIAAQCGHA +G Y +AK+H + + WE G KIAVKCP D++ E AKA + G+ Y+V DAG TQIAAGS+TVL +GPAP + F GVS+H KL+ Sbjct: 44 EDEDWDSDD-DGPAEANCPSSAWGISDAPYKMVLCVNTSLSMGKGKIAAQCGHAAVGCYKRAKRHCQAGLSAWERTGCAKIAVKCPSEDEMDEIAAKALSRGIPIYLVEDAGRTQIAAGSRTVLGLGPAPVREFDGVSNHLKLM 186
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Match: A0A7S2YD90_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YD90_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.030e-35 Identity = 71/137 (51.82%), Postives = 88/137 (64.23%), Query Frame = 3 Query: 162 EDEDNVLTPGQIINNYSFLDGAFKMVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIAVKCPDLDQLLEAEAKARAAGLITYVVRDAGHTQIAAGSQTVLAIGPAPEKAFAGVSDHFKLL 572 ED + P + + + +KMV CVN L MGKGKIAAQC HA +G Y +A K P+AVK WE G KIAVKCP +++ AKA + G+ Y+V DAG TQIAAGS+TVL +GPAP F GVSDH KL+ Sbjct: 49 EDLQGLQEPSADASKWGMFNSPYKMVLCVNTSLSMGKGKIAAQCCHAAVGCYKRANKTIPNAVKAWECTGCAKIAVKCPSEEEMDLICAKAMSKGIPVYLVEDAGRTQIAAGSRTVLGLGPAPVSVFEGVSDHLKLM 185 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig102.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig102.10.1 >prot_H-akashiwo_Contig102.10.1 ID=prot_H-akashiwo_Contig102.10.1|Name=mRNA_H-akashiwo_Contig102.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=114bp MVFCVNMDLKMGKGKIAAQCGHATLGAYLQAKKHSPSAVKCWEWIGQKKIback to top mRNA from alignment at H-akashiwo_Contig102:473157..474899- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig102.10.1 ID=mRNA_H-akashiwo_Contig102.10.1|Name=mRNA_H-akashiwo_Contig102.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1743bp|location=Sequence derived from alignment at H-akashiwo_Contig102:473157..474899- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig102:473157..474899- >mRNA_H-akashiwo_Contig102.10.1 ID=mRNA_H-akashiwo_Contig102.10.1|Name=mRNA_H-akashiwo_Contig102.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=342bp|location=Sequence derived from alignment at H-akashiwo_Contig102:473157..474899- (Heterosigma akashiwo CCMP452)back to top |