mRNA_H-akashiwo_Contig1018.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: A0A7R9WSF8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSF8_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.560e-15 Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 49 IAIIPNESLKFNLDVKPKTAVVQLKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRDHIVLRDDPAQREAGEAG-----DKFLVQT 342 + I P+ L FNL T+ L L+HPG D + AYKIKTT P+RYLVRPNQGMI PG S V I+L+++D +L + + G+ G DKFLVQ+ Sbjct: 7 LEITPDTYLDFNLAPNELTSRTTLTLRHPGHTDDHI-AYKIKTTQPRRYLVRPNQGMIAPGGSDTVSILLIEKDKQILLQ--SYEKLGQTGLDHSKDKFLVQS 106
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: A0A7S2XZQ3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZQ3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 9.210e-15 Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 28 AAPQSADIAIIPNESLKFNLDVKPKTAVVQLKLQHPGPLDAAV-----MAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRDHIVLRDDPAQREAG-------EAGDKFLVQ 339 A S ++ + P+++L+F L + + QL L+H GP A MA+KIKTT PKRYLVRPNQG+I PG+S ++I LVD+D I L + A + AG E+ DKFLVQ Sbjct: 36 AVASSYELVMAPSDTLQFPLAAE--RSQTQLILKHSGPPVAVAEGSEPMAFKIKTTQPKRYLVRPNQGLILPGQSQTIEISLVDKDRIYLLN--AAQAAGSTEGINRESTDKFLVQ 147
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: A0A7S3LDL8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDL8_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 4.300e-13 Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 49 IAIIPNESLKFNLDVKPKTAVVQLKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRDHIVLRDD---PAQREAGEAGDKFLVQTT 345 + I P +KF L T + L+HPG A +A+K+KTT P+RYLVRPNQG+I GK+ +V I+LV++D L Q DKFLVQ+T Sbjct: 6 VEISPESEIKFELSSGEATPKAVITLKHPGG-SAGSVAFKVKTTQPRRYLVRPNQGIITAGKTEEVQILLVEKDKNSLYQSFLRLGQAALDNCKDKFLVQST 106
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: A0A7S2KGL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KGL7_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.930e-12 Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 49 IAIIPNESLKFNLDVKPKT------AVVQLKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRDHIVLR---DDPAQREAGEAGDKFLVQTTPAVSD 360 + I P SL+F + P T + + L+HPG +A+K+KTT P+RYLVRPNQG++ P S V I+LVD+D VL + Q + DKFLVQ+ AVSD Sbjct: 8 LEIDPESSLQFTITRDPATDGSDGSSRCTMTLRHPGHTKG-YLAFKVKTTQPRRYLVRPNQGIVAPNSSETVSILLVDKDRQVLYSTYERLGQSALDHSKDKFLVQSC-AVSD 118
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: A0A7S0UGK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGK8_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.620e-12 Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 49 IAIIPNESLKFNLDVKPKTAVVQLKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRDHIVLR---DDPAQREAGEAGDKFLVQTTPAVS 357 + I P L F+L T + L+H G ++ A+K+KTT P+RYLVRPNQG+I PG S + I+LV++D VL D Q + DKFLVQ+ A S Sbjct: 6 LIIDPESELVFSLSPNEATPRCMMTLKHGGGSTESI-AFKVKTTQPRRYLVRPNQGLIAPGTSETISILLVEKDKQVLLQNYDRLGQSGLDHSKDKFLVQSCAADS 110
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: A0A7S4QY17_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY17_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.530e-11 Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 19 PADAAPQSADIAIIPNESLKFNLDVKPKTAVVQ-----------LKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRDHIVLR---DDPAQREAGEAGDKFLVQTTPAVSDGNPVMDPE 384 P+D + S + + P +L+F L P +A + L+HPG +A+K+KTT P+RYLVRPNQG++ P + V I+LV++D +L D Q + DKFLVQ+ A + + D E Sbjct: 2 PSDESAPSYALEVTPESALQFTLTRTPASAAENSSTDAGVTRCTMTLRHPGKTGQH-LAFKVKTTQPRRYLVRPNQGIVAPNSTETVSILLVEKDKQILLQSYDRLGQSALDHSKDKFLVQSCAAPDEFASLYDKE 136
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: A0A1Z5K8X9_FISSO (Vesicle-associated membrane protein-associated protein A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8X9_FISSO) HSP 1 Score: 69.3 bits (168), Expect = 2.070e-11 Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 61 PNESLKFNLDVKPKTAVVQLKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRDHIVLRDDP---AQREAGEAGDKFLVQT 342 P+ +L+F L + ++ L+L+HP A + A+K+KTT P+RYLVRPNQG+I PG + V I+LV+++ L Q ++ DKFLVQ+ Sbjct: 17 PDSTLQFTLSNQEQSPSCSLELRHPDASSAPI-AFKVKTTQPRRYLVRPNQGLIEPGGAQTVQILLVEKEKNSLLQSYERLGQPTLDQSKDKFLVQS 112
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: G4YN91_PHYSP (MSP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YN91_PHYSP) HSP 1 Score: 68.6 bits (166), Expect = 2.710e-11 Identity = 48/113 (42.48%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 31 APQSADIAIIPN--------ESLKFNLDVKPKTAVVQLKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRD-HIVLRDDPAQREAGEAGDKFLVQT 342 A D+A+ PN +SL F+L +P+TA Q L D +A+K+KTT P RYLVRPNQG++ P S + +IL +D +LR DPA+R+ A DKFLVQ+ Sbjct: 2 ASSGVDVALAPNSSVILEPADSLSFHL--QPQTAP-QAVLTIRNVADDRQIAFKVKTTRPLRYLVRPNQGLLGPNGSASIMVILQQKDCDELLRLDPAERQL--ANDKFLVQS 109
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: A0A3F2S0D5_9STRA (MSP domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0D5_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.060e-11 Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 31 APQSADIAIIPNESLKFNLDVKPKTAVVQLKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRD-HIVLRDDPAQREAGEAGDKFLVQT 342 AP S+ + + P +SL F+L +P+TA Q L D +A+K+KTT P RYLVRPNQG++ P S + +IL +D +LR DPA+R+ A DKFLVQ+ Sbjct: 11 APNSS-VILEPADSLSFHL--QPQTAP-QAVLTIRNVADDRQIAFKVKTTRPLRYLVRPNQGLLGPNGSASIMVILQQKDCDELLRLDPAERQL--ANDKFLVQS 109
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Match: H3GM18_PHYRM (MSP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM18_PHYRM) HSP 1 Score: 68.9 bits (167), Expect = 3.290e-11 Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 31 APQSADIAIIPN--------ESLKFNLDVKPKTAVVQLKLQHPGPLDAAVMAYKIKTTAPKRYLVRPNQGMIPPGKSVQVDIILVDRD-HIVLRDDPAQREAGEAGDKFLVQT 342 A D+A+ PN +SL F+L +P+TA Q L D +A+K+KTT P RYLVRPNQG++ P S V +IL +D +LR DPA+R+ A DKFLVQ+ Sbjct: 2 ASSGVDVALAPNSSVILEPADSLSFHL--QPQTAP-QAVLTIRNVADDRQIAFKVKTTRPLRYLVRPNQGLLGPNGSASVMVILQQKDCDELLRLDPAERQL--ANDKFLVQS 109 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1018.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1018.2.1 >prot_H-akashiwo_Contig1018.2.1 ID=prot_H-akashiwo_Contig1018.2.1|Name=mRNA_H-akashiwo_Contig1018.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=126bp MDPADAAPQSADIAIIPNESLKFNLDVKPKTAVVQLKLQHPGPLDAAVMAback to top mRNA from alignment at H-akashiwo_Contig1018:57947..58991- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1018.2.1 ID=mRNA_H-akashiwo_Contig1018.2.1|Name=mRNA_H-akashiwo_Contig1018.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1045bp|location=Sequence derived from alignment at H-akashiwo_Contig1018:57947..58991- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1018:57947..58991- >mRNA_H-akashiwo_Contig1018.2.1 ID=mRNA_H-akashiwo_Contig1018.2.1|Name=mRNA_H-akashiwo_Contig1018.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=378bp|location=Sequence derived from alignment at H-akashiwo_Contig1018:57947..58991- (Heterosigma akashiwo CCMP452)back to top |