mRNA_H-akashiwo_Contig1016.9.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: A0A7S3Y9Z5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9Z5_HETAK) HSP 1 Score: 270 bits (689), Expect = 6.500e-91 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 2 Query: 32 MSMECVKAKEVALNGNPHKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRLRSLLDGTKKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKALEAAAAAVKTGAGSDADGELRASLISEQDYIEDHEEEEA 454 MSMECVKAKEVALNGNPHKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRLRSLLDGTKKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKALEAAAAAVKTGAGSDADGELRASLISEQDYIEDHEEEEA Sbjct: 1 MSMECVKAKEVALNGNPHKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRLRSLLDGTKKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKALEAAAAAVKTGAGSDADGELRASLISEQDYIEDHEEEEA 141
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: A0A7S2MHG8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHG8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.060e-21 Identity = 64/147 (43.54%), Postives = 84/147 (57.14%), Query Frame = 2 Query: 23 KKGMSMECVKAKEVALNGNPHKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRLR---SLLDGTKKISEEV-LSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKALEAAAAAVKTGAGSDADGELRASLISEQDYIEDHEEEE 451 + G+ C+ + L + +CPL+EIVH H+C+RGEL +L D VKRLR + D I + LE+Q++SQF+LL AVF+AHSTAEDETIWPAL+ K AG DA I EQ+Y EDH +EE Sbjct: 7 RNGLRSRCMSFDDAPLASKS----FANCPLVEIVHLHDCIRGELNTLLDRVKRLRHGVATRDPNSLIESKAHADLELQIRSQFQLLLAVFKAHSTAEDETIWPALRLKTE-------SMQAGGDA--------IEEQEYAEDHADEE 134
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: A0A7S2RAI9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAI9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.160e-18 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 2 Query: 29 GMSMECVKAKEVALNGNPHKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRLRSL-LDGTKKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKALEAAAAAVKTGAGSDADGELRASLISEQDYIEDH 439 GM++ V + + + CPL EI+ H+C RGELR+L + + LR L GT + + SLE++++SQF +L+AVF+AHSTAEDETIWPAL+ K + A + ++YIEDH Sbjct: 27 GMALHVALPTPVLVEASSASKTFAGCPLFEIIELHDCFRGELRTLRERIGHLRDQELSGTPTVLDN--SLELEIRSQFNILYAVFKAHSTAEDETIWPALRAKTKQLGKALA-----------YEDEALHAEEYIEDH 151
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: W7TVL5_9STRA (Zinc finger protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVL5_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.170e-18 Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 83 HKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRLRSLLDGTKKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKA 337 H+ DCPL+EIVHFH+CLRGE++ +LR+++ G +S+E + LE ++ +QF L VFQAHS AED+ IWPAL++KA Sbjct: 56 HRAALADCPLVEIVHFHDCLRGEVQLFAAGTAKLRAIVSGRGVLSKEAIDLEARLHAQFLSLRRVFQAHSKAEDDLIWPALREKA 140
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: A0A1Z5KF27_FISSO (Zinc finger protein-like protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KF27_FISSO) HSP 1 Score: 81.6 bits (200), Expect = 3.590e-15 Identity = 46/124 (37.10%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 83 HKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRL-RSLLDGTKKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKALEAAAAAVKTGAGSDADGELRASLISEQDYIEDHEEEE 451 H++L++DC L+EI+H H+CLRG L++L +V+ L +++ G++ E+ LE +V +F+++ +VF+AHS+AEDE IWPAL++K G + ++I +++Y EDH +EE Sbjct: 22 HRELFKDCALVEIIHLHDCLRGSLKALEHDVQDLAKAVRSGSE---EQQRMLEKKVAGRFQVIWSVFRAHSSAEDEFIWPALQRKTQGRIQGHKHKG---------KDAIIEQEEYEEDHADEE 133
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: A0A7S1XWB5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWB5_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.760e-12 Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 2 Query: 77 NPHKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRLRSLLDGTKKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQK 334 +P ++DC L+EIVH H LRGELRSL +V L + E S + + SQF LL AVF+AHS AED+ IWPAL+ K Sbjct: 29 DPALAAFEDCALVEIVHLHRALRGELRSLLASVSALAECREA------ECGSQVLHIMSQFNLLWAVFRAHSKAEDDVIWPALRAK 108
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: A0A6H5L587_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L587_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 6.270e-12 Identity = 57/171 (33.33%), Postives = 67/171 (39.18%), Query Frame = 2 Query: 86 KDLYQDCPLIEIVHFHECLRGELRSLHDNVKRL-RSLLDGTKKISEEV--------------------------------------------------------------------------------------LSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKA 337 + ++DCPLIEIVHFHECLRGELRSL NV+ L R + D K V L LE++VQSQF+LL AVFQ+HSTAEDE IWPALK+KA Sbjct: 40 RQAFEDCPLIEIVHFHECLRGELRSLRRNVQTLCRQMRDLHHKTQSAVAGAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTANDASATTPGLMSPSSCAAAGPTAESLPAQHLELEVRVQSQFQLLWAVFQSHSTAEDEVIWPALKEKA 210
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: A0A7S4VUG9_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VUG9_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 6.270e-12 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 2 Query: 86 KDLYQDCPLIEIVHFHECLRGELRSLHDNVKRLRSLLDGT---------------------KKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQK 334 +D + DC L+EIVH H+CLRG LR+L +V L S + T + +++ LE +V +FK++ +VF+AHS+AEDE IWPAL+ K Sbjct: 65 RDEFGDCALVEIVHLHDCLRGALRALQRDVSDLSSTVSLTAVGEDELAILKSNQTEESSSSSSLHDKINELERRVAGRFKVIWSVFRAHSSAEDEFIWPALQSK 168
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: A0A7S1G2H4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2H4_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.960e-12 Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 95 YQDCPLIEIVHFHECLRGELRSLHDNVKRLRS-------LLDGTKK--ISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQK 334 Y DC LIEI+H H+CLRG +R+L +V+RL++ L+ K +S + + +V ++F+++ +VF +HS+AEDE IWPAL+ K Sbjct: 52 YSDCALIEIIHLHDCLRGAIRNLAADVRRLQNSAVSLSNLVPSKNKTEVSPSLSEMARKVAARFQVIWSVFTSHSSAEDEFIWPALRNK 140
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Match: K0RRK6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RRK6_THAOC) HSP 1 Score: 71.6 bits (174), Expect = 1.120e-11 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 101 DCPLIEIVHFHECLRGELRSLHDNVKRLRSLLDGTKKISEEVLSLEMQVQSQFKLLHAVFQAHSTAEDETIWPALKQKALE----AAAAAVKTGAGSDADGELRASL-------ISEQDYIEDHEEEE 451 DC L+EI+H H+C RG L L +V L + S+ V L+ +V +F ++ VF+AHS+AEDE IWPALK K +E + A ++ ++ DGE + I +++Y EDH +EE Sbjct: 22 DCALVEIIHLHDCFRGALEKLESDVAELCREVSCLVP-SDRVTDLQGRVAGRFSVIWTVFKAHSSAEDEFIWPALKAKQVELPNSSCNCACESSQQANEDGEAQGGRKTSESLNIGQEEYEEDHADEE 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1016.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1016.9.1 >prot_H-akashiwo_Contig1016.9.1 ID=prot_H-akashiwo_Contig1016.9.1|Name=mRNA_H-akashiwo_Contig1016.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=141bp MSMECVKAKEVALNGNPHKDLYQDCPLIEIVHFHECLRGELRSLHDNVKRback to top mRNA from alignment at H-akashiwo_Contig1016:321365..322119+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1016.9.1 ID=mRNA_H-akashiwo_Contig1016.9.1|Name=mRNA_H-akashiwo_Contig1016.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=755bp|location=Sequence derived from alignment at H-akashiwo_Contig1016:321365..322119+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1016:321365..322119+ >mRNA_H-akashiwo_Contig1016.9.1 ID=mRNA_H-akashiwo_Contig1016.9.1|Name=mRNA_H-akashiwo_Contig1016.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=423bp|location=Sequence derived from alignment at H-akashiwo_Contig1016:321365..322119+ (Heterosigma akashiwo CCMP452)back to top |