mRNA_H-akashiwo_Contig1016.10.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A7S4DJ29_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ29_HETAK) HSP 1 Score: 173 bits (439), Expect = 3.070e-52 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 Query: 70 CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR Sbjct: 22 CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 95
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A835SJY4_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SJY4_CHLIN) HSP 1 Score: 99.8 bits (247), Expect = 2.440e-22 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 49 GSSTPAACHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 G T CHD+ H+MDRY + M+CM C E QPVG CR AC P++RY C IC LFDD PGK IYHCP+CN+CR Sbjct: 1634 GVYTCRLCHDEAADHRMDRYAVAEMRCMACGERQPVGPSCR--ACA---SPMARYVCNICHLFDDEPGKDIYHCPFCNVCR 1709
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A6H5L587_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L587_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 8.360e-22 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 70 CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYS----KEP-----LSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 CHDQ HK+DR + M CM CE QP+ CRN +C+ + K P ++RYYC IC LFDDAP K IYHCPYCN+CR Sbjct: 864 CHDQVSDHKVDREEVTEMLCMRCETLQPINSECRNHSCRPAAAEGKPPCTGRKMARYYCGICHLFDDAPEKDIYHCPYCNVCR 946
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A2K3DRZ9_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DRZ9_CHLRE) HSP 1 Score: 97.8 bits (242), Expect = 1.160e-21 Identity = 44/81 (54.32%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 49 GSSTPAACHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 G T CHD+ H+MDRY + M+CM C E QPV CR AC + ++RYYC IC LFDD PGK IYHCP+CN+CR Sbjct: 1730 GVYTCRLCHDEAADHRMDRYAVSEMRCMSCGERQPVAAACR--ACAAN---MARYYCNICHLFDDEPGKDIYHCPFCNVCR 1805
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: I2CRN7_NANGC (Zinc ion binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRN7_NANGC) HSP 1 Score: 90.9 bits (224), Expect = 3.250e-20 Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 70 CHDQE-QGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 CHDQ H MDRY + + CM C E QP + CRN C++ S YYC IC+L+DD GKAIYHCPYCN+CR Sbjct: 23 CHDQALTDHAMDRYAVAEICCMRCGELQPPARTCRNPHCRHV---FSAYYCDICRLYDDDVGKAIYHCPYCNVCR 94
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A6A0A395_HAELA (Uncharacterized protein n=2 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A395_HAELA) HSP 1 Score: 89.7 bits (221), Expect = 4.320e-20 Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 55 STPAA-CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 S PA CHD+ + H+MDRY + M CM C QPV C A K L+RYYC IC L DD PG++IYHCP+CN+CR Sbjct: 2 SRPARLCHDEAETHRMDRYAVTEMVCMECGVQQPVAGECWACAAK-----LARYYCNICHLLDDEPGRSIYHCPFCNVCR 76
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A150GNV4_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GNV4_GONPE) HSP 1 Score: 92.8 bits (229), Expect = 6.560e-20 Identity = 40/74 (54.05%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 70 CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 CHD+ H+MDRY + M+CM C E QPVG CR ++RY C IC LFDD PGK IYHCP+CN+CR Sbjct: 1206 CHDEACDHRMDRYAVSEMRCMLCGERQPVGGNCR-----VCHSAMARYVCNICHLFDDEPGKDIYHCPFCNVCR 1274
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A835XVX6_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XVX6_9CHLO) HSP 1 Score: 92.8 bits (229), Expect = 6.570e-20 Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 70 CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 CHD+ H+MDRY + M+CM C E QPV CR AC + ++RY C IC LFDD PGK IYHCP+CN+CR Sbjct: 1346 CHDEASDHRMDRYAVSEMRCMLCGERQPVAGTCR--ACSGA---MARYVCNICHLFDDEPGKDIYHCPFCNVCR 1414
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A2P6TED0_CHLSO (LOV domain-containing isoform B n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TED0_CHLSO) HSP 1 Score: 92.8 bits (229), Expect = 6.690e-20 Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 70 CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 CHD+ + H++DRY + M CM C QPV C AC P++RYYC+IC LFDD PG+ IYHCP+CN CR Sbjct: 1273 CHDEAEDHQVDRYAVSEMVCMECATRQPVAASC--SACD---APMARYYCSICHLFDDEPGRHIYHCPFCNFCR 1341
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Match: A0A2V0PEX6_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PEX6_9CHLO) HSP 1 Score: 91.7 bits (226), Expect = 1.670e-19 Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 70 CHDQEQGHKMDRYRIHTMKCMGCEETQPVGQYCRNKACKYSKEPLSRYYCAICKLFDDAPGKAIYHCPYCNLCR 291 CHD+ H+MDRY + M CM C QPV AC E +RYYC+IC LFDD PG++IYHCP+CN+CR Sbjct: 1320 CHDEASDHRMDRYSVAEMVCMPCGLRQPVAA-----ACARCGEGAARYYCSICHLFDDEPGRSIYHCPFCNVCR 1388 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1016.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1016.10.1 >prot_H-akashiwo_Contig1016.10.1 ID=prot_H-akashiwo_Contig1016.10.1|Name=mRNA_H-akashiwo_Contig1016.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=97bp VRRLPGGGRWCRRRAAGSSTPAACHDQEQGHKMDRYRIHTMKCMGCEETQback to top mRNA from alignment at H-akashiwo_Contig1016:333983..334988+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1016.10.1 ID=mRNA_H-akashiwo_Contig1016.10.1|Name=mRNA_H-akashiwo_Contig1016.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1006bp|location=Sequence derived from alignment at H-akashiwo_Contig1016:333983..334988+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1016:333983..334988+ >mRNA_H-akashiwo_Contig1016.10.1 ID=mRNA_H-akashiwo_Contig1016.10.1|Name=mRNA_H-akashiwo_Contig1016.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=291bp|location=Sequence derived from alignment at H-akashiwo_Contig1016:333983..334988+ (Heterosigma akashiwo CCMP452)back to top |