mRNA_H-akashiwo_Contig1014.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: A0A7S2RP08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP08_9STRA) HSP 1 Score: 199 bits (505), Expect = 3.030e-60 Identity = 104/208 (50.00%), Postives = 150/208 (72.12%), Query Frame = 1 Query: 4 EQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECIDVANDIANKESFQSDSIQARIETLKKEV 627 E+FCLLAK+Q+GRA VALI Q L++ K+FV GELLAM+N+Q LRGTE E L+LLELFAYGTYSEY+ LPEL++ +KL+ LSI+SLA + K V Y+ LQ EL I ++R+LEDLII++IY GLV GKL+Q +L V+S ++RDV+P ++ +M++KL W S EQ++ +L + + N+ E+ ++A++E K++ Sbjct: 28 ERFCLLAKSQRGRAVVALIEQALSSKKVFVVGELLAMDNIQALRGTEFEAHLRLLELFAYGTYSEYQAAKDQLPELNSNMKEKLRALSIVSLAHTKKQVTYTELQQELAITNVRELEDLIIDTIYAGLVDGKLDQANGMLNVRSAVARDVRPEEVGEMIQKLTQWGSDMEQLIAALDKNMAHVNEARQGETKLRQEVRAKVEETTKKL 235
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: A0A7S2CC19_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC19_9STRA) HSP 1 Score: 197 bits (501), Expect = 7.340e-60 Identity = 103/177 (58.19%), Postives = 130/177 (73.45%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSL 531 LEQFCLLAKT K RA V LI Q L N KIFVFGELL M+N+Q LR TEH L+LLELFAYGTYS+Y P+++ Q +KL+QLSI+SLA + K VPY VLQAEL I ++R+LEDLII++IYTGLV GK++Q VLKVKS + RDV+P +D M+ KL W+ + +L ++ Sbjct: 9 LEQFCLLAKTAKSRAAVELIKQALTNRKIFVFGELLFMDNMQALRDTEHAEYLRLLELFAYGTYSQYLAQRDQYPDMNAAQTEKLRQLSIVSLAHTQKKVPYEVLQAELAINNVRELEDLIIDTIYTGLVTGKMDQTTGVLKVKSAVPRDVKPEDVDAMISKLTDWRDKCDAILKTM 185
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: A0A7S2UVG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVG8_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.750e-58 Identity = 100/182 (54.95%), Postives = 134/182 (73.63%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECID 546 LE+F +LAK KGRACVALI QVLNN ++FVFGELLA N+Q L GTEHE L+LLELFAYGTYS+Y + SSLPEL+ Q KL+QLS++SLA +SK++ Y L EL ++++R+LEDL+IE+IY GLV GKL+Q VLKV + +RDV+P ++ +L +L W T+ ++ L C + Sbjct: 11 LERFVILAKNAKGRACVALIQQVLNNNRVFVFGELLASPNVQALAGTEHELHLRLLELFAYGTYSDYHENRSSLPELTPAQRTKLRQLSLVSLASASKVLRYEELMKELQLENVRELEDLVIETIYVGLVLGKLDQLGGVLKVSAVGARDVRPSEVPHLLHRLQHWSQVTQALVQELGTCAE 192
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: A0A835YQX8_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX8_9STRA) HSP 1 Score: 186 bits (472), Expect = 2.920e-56 Identity = 94/201 (46.77%), Postives = 146/201 (72.64%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECIDVANDIANKESFQSDSIQAR 603 LEQ+CLLAKT KGRACVALI +V+ + KIFVFGELLAM N+Q LRGTEHEP L+LLELFAYG Y ++K +LP+LS +KL+ L++++LA +S++VPY LQ LG+ S+R +ED++++++Y GL++ +L+Q+ L+V+ RDV+P ++D M+ L+ W T++ L L++ ++ A K +++++ +Q R Sbjct: 10 LEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGVNSA-----KAAWKAEEVQQR 205
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: A0A7S4B6U7_CHRCT (Hypothetical protein n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6U7_CHRCT) HSP 1 Score: 187 bits (476), Expect = 7.360e-56 Identity = 99/203 (48.77%), Postives = 138/203 (67.98%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECIDVANDIANKESFQSDSIQARIE 609 LEQ CLLAK+ KG +C ALI Q L++P +FVFGELL M+N+Q L GT EP+L+LL+LFAYGT+SEY+ AS+LPELS Q KKLK+LS ++L +SK +PY L E+ + S+R LEDL+IE Y GL++GKL+QQ L V CI RD+ P ++ M E L W + QML + E ++ + + + Q+ ++ +IE Sbjct: 32 LEQLCLLAKSVKGNSCAALISQALDHPAVFVFGELLDMKNVQELAGTPSEPSLELLKLFAYGTWSEYQGRASTLPELSEAQQKKLKKLSFVTLCANSKSIPYDKLMREVEVSSLRQLEDLLIECFYEGLLQGKLDQQAGQLDVHYCIGRDIHPSDIESMCETLGQWHHNSVQMLTLMSEKLESYKEQCDAQRLQALELEQKIE 234
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: UPI000644B631 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B631) HSP 1 Score: 184 bits (468), Expect = 6.060e-55 Identity = 94/209 (44.98%), Postives = 146/209 (69.86%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECIDVANDIANKESFQSDSIQARIETLKKEV 627 L+Q+ +LAK KGRAC ALI QVL NP +FVFGELL M N+Q L+ +E + + LL +FA+GTY+EY K +LP L+ KL+QL+I+ L+ SK++PY++LQ +LGIQS+R+LEDLIIESIY ++KGKL+Q+ + L+++ I RDV GQ+D ++ L++W ++ +L ++ ++ A+ + +K D + +RIE K ++ Sbjct: 14 LKQYIVLAKGNKGRACAALIEQVLANPNVFVFGELLDMPNVQALQQSEFKSSYDLLNIFAFGTYNEYLKNKDALPALTPAMITKLRQLTIVYLSTVSKVIPYAILQEQLGIQSLRELEDLIIESIYQNVIKGKLDQKNKHLEIEFAIGRDVSIGQIDNVIATLDNWIGTSDTLLNNITSLMEHADKVHHKNRVDRDELASRIEVAKSQI 222
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: A0A4D9D7R0_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7R0_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.900e-54 Identity = 96/187 (51.34%), Postives = 138/187 (73.80%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQS-IRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECIDVAND 558 LEQF +LAK+ KG ACVALI QVL+ KI VFGELLAM NL+ LRG+EHEP L+LLE+FAYGTY++Y++ +LP L+ Q +KL+QL++++LAQ + +PY+VL EL I +R+LEDLIIESIY G++ G+L+Q+ + ++K I RDV+ +D M++KL W + E +L SL++ + +D Sbjct: 10 LEQFTILAKSAKGNACVALIQQVLSTRKIVVFGELLAMPNLEALRGSEHEPYLRLLEIFAYGTYADYQRQRGTLPPLTPPQLRKLQQLTLVTLAQKHESIPYAVLFRELDIDGDVRELEDLIIESIYMGVLTGRLDQRGGLFRIKGAIGRDVRLEDIDGMMDKLQKWVANAETLLTSLEQRMSEIHD 196
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: A0A7S0WJU6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WJU6_9CHLO) HSP 1 Score: 180 bits (456), Expect = 3.280e-53 Identity = 88/210 (41.90%), Postives = 147/210 (70.00%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLII-ESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECIDVANDIANKESFQSDSIQARIETLKKEV 627 LEQFC+LAK+ KG A V +I + + P +F FGELL NLQ L+GTEH + +LL +FA+GT+S+YK A LP L+ +Q KLKQL+++SLA+++K++PYS+L +L + ++R LEDL+I + +YTG+++GKL+QQ+ L+V I RD++PGQL M+ L+ W ++++L ++E + ++ + +++ ++A+IE +K + Sbjct: 6 LEQFCILAKSAKGHAAVQIIAEATSAPNLFAFGELLDQPNLQELKGTEHAASYELLRMFAHGTWSDYKAAAGMLPALNAEQQLKLKQLTVVSLAENAKVLPYSLLMEQLEVTNVRQLEDLLINDCMYTGIIQGKLDQQQRCLEVHYAIGRDIRPGQLKNMISALSEWAKTSDELLKGIKEKVAWSSSMTEEKATHRAELEAKIEEIKNAI 215
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: F0ZBV6_DICPU (PCI domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZBV6_DICPU) HSP 1 Score: 180 bits (456), Expect = 4.020e-53 Identity = 91/206 (44.17%), Postives = 143/206 (69.42%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECIDVANDIANKESFQSDSIQARIETLK 618 L+QF +LAK+ KGRACVA+I Q LN+P +FVFGELL M N+Q L+ TE + LL++FA+G+YS+Y SLP+L+ Q KL+QL+I+ L+ SS ++PYS+LQ L I ++R+LEDLII+SIY ++KGKL+Q+ + L+++ I RDVQP QLD M+ L++W ++ +L ++ + ++ + + + + + + ET K Sbjct: 14 LKQFTILAKSGKGRACVAVIEQALNHPNVFVFGELLDMPNIQELKNTEFKSYYDLLQIFAFGSYSDYITSKDSLPQLTPQMTTKLRQLTIVFLSSSSNVIPYSILQKFLDISNVRELEDLIIDSIYQNIIKGKLDQKNKHLEIEYSIGRDVQPEQLDSMINILDNWSQSSQGLLNNINKLVEESEKVHVLYHKEREEFEKKFETAK 219
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Match: A0A7S0LH26_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LH26_9EUKA) HSP 1 Score: 178 bits (451), Expect = 1.700e-52 Identity = 93/209 (44.50%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 1 LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEPALKLLELFAYGTYSEYKKLASSLPELSTQQAKKLKQLSIISLAQSSKLVPYSVLQAELGIQSIRDLEDLIIESIYTGLVKGKLNQQEEVLKVKSCISRDVQPGQLDQMLEKLNSWKSYTEQMLGSLQECIDVANDIANKESFQSDSIQARIETLKKEV 627 L QFCLLAK+ KG CV+LI Q L +P I VF ELL M+N+Q+L G+E P+L+LL+LFAYGT+S+YK+ + LP LS QAKKLK+L++++ SK +PY+ L EL + ++R +EDL+IE Y GL++GKL+Q L V CI RD+ P +++ M + L +W + ++LGS+++ +D+ + Q + RIET++ V Sbjct: 22 LLQFCLLAKSAKGAQCVSLISQALEHPAITVFAELLDMQNIQSLEGSECAPSLELLKLFAYGTWSDYKEQVAQLPALSEAQAKKLKKLTVVTFCSQSKTLPYATLMRELEVSTVRQVEDLLIECFYEGLIQGKLDQCANQLDVHYCIGRDIHPSEVNSMCDLLANWHRNSIELLGSMRDKLDMYKAECDDFRNQQLELDGRIETVRANV 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1014.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1014.2.1 >prot_H-akashiwo_Contig1014.2.1 ID=prot_H-akashiwo_Contig1014.2.1|Name=mRNA_H-akashiwo_Contig1014.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=210bp LEQFCLLAKTQKGRACVALIHQVLNNPKIFVFGELLAMENLQTLRGTEHEback to top mRNA from alignment at H-akashiwo_Contig1014:95791..96420- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1014.2.1 ID=mRNA_H-akashiwo_Contig1014.2.1|Name=mRNA_H-akashiwo_Contig1014.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=630bp|location=Sequence derived from alignment at H-akashiwo_Contig1014:95791..96420- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1014:95791..96420- >mRNA_H-akashiwo_Contig1014.2.1 ID=mRNA_H-akashiwo_Contig1014.2.1|Name=mRNA_H-akashiwo_Contig1014.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=630bp|location=Sequence derived from alignment at H-akashiwo_Contig1014:95791..96420- (Heterosigma akashiwo CCMP452)back to top |