mRNA_H-akashiwo_Contig1013.9.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 556 bits (1432), Expect = 2.970e-198 Identity = 266/310 (85.81%), Postives = 293/310 (94.52%), Query Frame = 1 Query: 1 ISGSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELSDANLYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGTQSETLRLGGDLVLRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKALNAENFSRHQRVLHHGF 930 ISGSS A+VS+FKQSLASKY LTDQG+LTQILGIKVVRDKR+KC LSQ SFIKDAL+KFGLDYLPACKTP+ HTVDLTP+PGFKAELSDANLYRSMVGTLAWVANWTRPEL F VH +QRTQ NPEPKHFEAV+RAFRYLKGTQSE+LRLGGDLVLRA+SD+DFC+DR+DGKSVTGYILFLG+API+WSSKLQGAVTTSTVEAEYLALRS+VKD+MWLR LL ++GCPQ EPTPVVEDNSAC+EWAND++V+K+NRHFHV+YHL KEQVSLGTIRMF+ KTHDQVADILTKALNA NF RHQRVLHHGF Sbjct: 42 ISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQRVLHHGF 351
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 251 bits (641), Expect = 2.210e-79 Identity = 123/141 (87.23%), Postives = 132/141 (93.62%), Query Frame = 1 Query: 1 ISGSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELSDANLYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYL 423 ISGSS A+VS+FKQSLASKY+LTDQG+LTQILGIKVVRDKR+KC LSQ SFIKDAL+KFGLDYLPACKTPI HTVDLTP+PGFKAELSDANLYRSMVGTLAWVANWTRPEL F VH +QRTQ NPEPKHFEAV+RAFRYL Sbjct: 128 ISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 250 bits (639), Expect = 2.190e-72 Identity = 131/310 (42.26%), Postives = 195/310 (62.90%), Query Frame = 1 Query: 1 ISGSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELS--DANLYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGTQSETLRLGGDLVLRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKALNAEN-FSRHQRVLH 921 ++ S + +S K++++ Y+++D G++ ILGIKV RD+ ++ + LSQ SFI++A KF + P+ +D+ + LS +A +RS+VGT+ W+A WT PE+ +++H + + ++P A RYL T+ + + LGG L L AY+DADFCS+R G+S +G+ +FLG +PIIWSS++Q VT +T EAEY++LR++V DVMWL+ LL LG +Q P+ EDN ACI WAND VSK RH HV+YH TKE V I + + T Q+AD+ TK L+ N F + RVLH Sbjct: 687 LASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGY-KQGCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNNGFKKFSRVLH 995
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: A0A151UDQ7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151UDQ7_CAJCA) HSP 1 Score: 190 bits (483), Expect = 3.760e-53 Identity = 113/301 (37.54%), Postives = 168/301 (55.81%), Query Frame = 1 Query: 1 ISGSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELSDANLYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGTQSETLRLGGD--LVLRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKALNAENF 897 I+G S +S+ KQ L +++ D G L+ LGI+++ +FLSQA + D +S+ GL TP+ TP G L D LYR +VG+L ++ TR + + VH V + P HF AV R Y+KGT L D L+LRAY DAD+ D D +SVTG+ +FLG++ I W SK Q V S+ EAEY A+ + +++W+R LL DLG PQ PT + DN + I+ A++ V ++ +H + H+T++QV GT+ + T DQ A++LTKA + +F Sbjct: 182 ITGDDSNGISELKQFLNLHFEMKDLGSLSYFLGIQILSCDDG--LFLSQAKYASDLISRAGLTDCKTESTPLETRAHFTPLDG--TPLEDPTLYRQLVGSLIYLTV-TRTNIAYVVHLVSQFMCAPRSTHFAAVLRIIIYIKGTIFHGLHYSVDSPLILRAYLDADWGGDPTDRRSVTGFCIFLGDSLISWRSKKQQLVARSSTEAEYRAMADTTSEIVWIRWLLGDLGFPQSSPTDLFCDNRSAIQIAHNDVFHERTKHIEIDCHITRQQVVRGTLHLISISTIDQPANLLTKAHHPGHF 477
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: UPI000901F676 (uncharacterized protein LOC109128812 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000901F676) HSP 1 Score: 185 bits (469), Expect = 8.190e-53 Identity = 100/307 (32.57%), Postives = 177/307 (57.65%), Query Frame = 1 Query: 7 GSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELSDAN------LYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGTQSETL--RLGGDLVLRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKALNAENFSR 903 G+S+ ++ +FK S+ S++ +TD GK+ LG++VV+D++ +F+SQ + ++ L K+G++ A K P+ PG K A ++ +V +L ++ TRP+L ++V+ V R P +H +R RY++GT+ + + GG+ L Y D+D+ D D KS Y+ LG + W SK Q VT ST EAE++++ +WLR+++A++G Q+E T + DNS+ I+ + + V+ +++H HV +H +E V+ G I++ + THDQ++DI+TKA+ E F + Sbjct: 17 GNSTVMLEEFKVSMMSEFSMTDLGKMKYFLGVEVVQDEKG--IFISQKKYAEETLRKYGMEECNAVKNPM--------VPGNKLSREGAGEEVNPTTFKQLVRSLRYLTA-TRPDLIYSVNLVSRYMERPNEQHMATAKRILRYVQGTRDFGIQYKYGGEQKLVGYVDSDYAGDVDDFKSTFEYVFMLGGGAVSWVSKKQPIVTLSTTEAEFVSVAYGACHAVWLRNIMAEIGSEQKEGTTMFCDNSSAIKLSKNPVLHGRSKHIHVRFHYLRELVNDGVIQLDYCSTHDQISDIMTKAVKLEAFEK 312
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: A0A251SEE8_HELAN (Putative reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SEE8_HELAN) HSP 1 Score: 189 bits (481), Expect = 9.400e-53 Identity = 106/303 (34.98%), Postives = 171/303 (56.44%), Query Frame = 1 Query: 1 ISGSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELSDANLYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGT--QSETLRLGGDLVLRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKALNAENFSR 903 I+ +S L+S+FK + ++++TD GKL LG++V + + + LSQ ++K+ L K+ + TP+ + + L+ E + ++YRS+VG+L ++ N TRP++ FAV + R P+ H+EA +R +Y+KGT Q T GG L +S++D+ + D KS +GYI LG+ PI W SK Q V S+ EAEY+AL + +WL+ +L +L P P+ DN + I A D V K++H V YH ++ + + + F T DQ+ADI+TKAL ++F R Sbjct: 60 IASNSMKLISEFKDEMKKEFEMTDMGKLHYFLGMEVSYEDGN--IILSQKKYMKNLLEKYRMSQCNTVSTPMDYGIKLSKDD--PEEFINESMYRSLVGSLMYLTN-TRPDIMFAVSKISRFMEAPKRSHWEAAKRILKYVKGTLDQGITYSKGGKQKLIGFSNSDYAGNVDDSKSTSGYIFHLGSGPISWQSKKQKVVALSSTEAEYMALTLAGCQAIWLKGILDELQGKDNYPIPIYCDNKSTICLAKDSVYHGKSKHIRVKYHFIRDLIRREDVTILFCATKDQLADIMTKALQPKDFLR 357
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: A0A6A3GI70_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GI70_9STRA) HSP 1 Score: 184 bits (467), Expect = 1.630e-52 Identity = 100/297 (33.67%), Postives = 165/297 (55.56%), Query Frame = 1 Query: 19 ALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELSDANL----YRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGTQSETLRLGGDL--VLRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKALNAE 891 A+++ K +A K+ + D G+ ILGI++ D + + +S ++ + + KFG + C TP+ V LT + + E A + YRS+VG+L ++A TRP++ AV + R NP KH++A + RYL T+ + G L L AYSDAD+ +R D +SV+G +L L AP++W S Q V S+ EAEY+AL VK+ +W+R LL D+G Q T + EDN + A ++ + +H + YH +E+V + + + T++Q+AD +TK L+++ Sbjct: 9 AVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISHKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSDEVELQYVDTNNQLADFMTKCLSSK 305
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.950e-52 Identity = 106/302 (35.10%), Postives = 164/302 (54.30%), Query Frame = 1 Query: 19 ALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPS--PGFKAELS--DANLYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGTQSETLRLGGDLV--LRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKALNAENFSRH 906 A ++ K + + L D G + ILGI+V D K + L Q +I D + +F TPI ++ +T P +AE++ +RS++G+L+++A TRP++ AV + R NP +H++A + RYLKGT++ + G + L AYSDAD+ SDR D +SV+G +L L +AP++W + Q V ST E EY+AL VK+ MW R LL +LG Q+ T + EDN I A + + +H + YH +E++ G I + + T +QVAD LTK L + H Sbjct: 2 ATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIADKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQAEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGLPKKTLLDH 303
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: A0A2P4YNT8_9STRA (Integrase catalytic core protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YNT8_9STRA) HSP 1 Score: 186 bits (472), Expect = 2.520e-52 Identity = 109/299 (36.45%), Postives = 172/299 (57.53%), Query Frame = 1 Query: 1 ISGSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELSDANLYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGTQSETLRLGG--DLVLRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTP---VVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKAL 882 ++GSSS ++++ K+ L +++++TD GK + ILGI+VV D V LSQA +I D L +FG+ +P+ ++ L S + DA +R VG L + TRP++ FAV V R NP+ +H+ AV+R FRYL+GT+S LR + R YSDAD+ D D KS +GY+ + P+ W SK Q +V+ ST EAEY+AL ++++ W+ LL ++ E P + EDN +CI+ + V + +H + YH +++V G + + + +T +ADILTK L Sbjct: 96 VTGSSSMMIAEVKKQLKARFEMTDSGKCSFILGIEVV-DNADGSVTLSQARYINDILERFGMQNCKPAASPVDLSMKLVASD--VSTKLDAP-FREAVGALMHLMTSTRPDIAFAVGYVSRFMENPQVEHWIAVKRIFRYLQGTKSHGLRFSPAKGIDFRGYSDADWAGDHSDRKSTSGYLFQVLGGPVSWGSKKQSSVSLSTSEAEYIALSLAIQEGKWVHKLLCEILDAAGEDIPDLKIFEDNQSCIKMTKNPVNHGRAKHIDIKYHHIRDEVKRGEVIVEYCETTTMLADILTKGL 390
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Match: UPI0010A9FE07 (uncharacterized protein LOC114820955 n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010A9FE07) HSP 1 Score: 184 bits (467), Expect = 2.760e-52 Identity = 108/304 (35.53%), Postives = 175/304 (57.57%), Query Frame = 1 Query: 1 ISGSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQASFIKDALSKFGLDYLPACKTPIGHTVDLTPSPGFKAELSDANLYRSMVGTLAWVANWTRPELDFAVHNVQRTQSNPEPKHFEAVERAFRYLKGTQSETL--RLGGDLVLRAYSDADFCSDRIDGKSVTGYILFLGNAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDVMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFHVTYHLTKEQVSLGTIRMFFTKTHDQVADILTKALNAENFSRH 906 ++GSSS V + Q L++ +DL D G+LT LG+++ + K + +F+ QA +IKD + K G+D TP L S G + L+D + YRS+VG+L ++ +TRP++ FAV+ V + ++ HF V+R RYL+GT + L A+SD+D+ + +SVTGY+++LG PI W SK Q +V+ S+ EAEY AL + D+ W+R +L DL C +P + DN + I +++ V + +H YH +E+V + + + T +Q ADILTK L++ +F +H Sbjct: 33 LTGSSSVKVQNVVQELSTVFDLKDLGRLTYFLGLQI-QYKSNGDIFVHQAKYIKDLIHKSGMDSCKPAATPCKPHSQLLCSEG--SLLADPSTYRSVVGSLQYLT-FTRPDIAFAVNTVCQYMNSLTEIHFGDVKRILRYLQGTLHTGIVYSAASHPTLTAFSDSDWAAYLNTRRSVTGYVVYLGENPISWQSKKQTSVSRSSTEAEYKALAHTAADIAWVRQILRDLKCSVPQPPIIHCDNMSAIALSSNPVFHSRIKHLDTDYHFVRERVQRRDLEVLYIPTEEQTADILTKGLHSLSFLKH 332 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1013.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1013.9.1 >prot_H-akashiwo_Contig1013.9.1 ID=prot_H-akashiwo_Contig1013.9.1|Name=mRNA_H-akashiwo_Contig1013.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=313bp ISGSSSALVSDFKQSLASKYDLTDQGKLTQILGIKVVRDKRSKCVFLSQAback to top mRNA from alignment at H-akashiwo_Contig1013:370521..371459- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1013.9.1 ID=mRNA_H-akashiwo_Contig1013.9.1|Name=mRNA_H-akashiwo_Contig1013.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=939bp|location=Sequence derived from alignment at H-akashiwo_Contig1013:370521..371459- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1013:370521..371459- >mRNA_H-akashiwo_Contig1013.9.1 ID=mRNA_H-akashiwo_Contig1013.9.1|Name=mRNA_H-akashiwo_Contig1013.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=939bp|location=Sequence derived from alignment at H-akashiwo_Contig1013:370521..371459- (Heterosigma akashiwo CCMP452)back to top |