mRNA_H-akashiwo_Contig1013.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.110e-66 Identity = 102/176 (57.95%), Postives = 131/176 (74.43%), Query Frame = 1 Query: 19 SDSVKSKFGLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDEKLTPMRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALPKAE 546 S S +S FGLAS WGV+ VL++L NA+KRL+P+A + F S L+ W Y F MAY EGYKAFQKKFSP+VV+RALTLD+ P+R V AGPY MG+FHA++ RKIVSW+++ V GLVQ V++LP+P+RS++D GVVAGLSWG +I+ Y+VRS FGT P +D LP E Sbjct: 89 STSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGD-LTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEE 263
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA) HSP 1 Score: 208 bits (530), Expect = 4.200e-65 Identity = 102/181 (56.35%), Postives = 136/181 (75.14%), Query Frame = 1 Query: 19 SDSVKSKFGLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDEKLT---PMRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALPKAEEK 552 S +S FG AS WGV+ VLS+L A++RL P+A + F LS WA Y SFVA MAY EG+KAFQKKFSP+VV+RALTLD+ T P+R + AGPYCMG+F+AT+ RKIVSW++ I V LV VV++LP+P+RS++DAGVVAGLSWG ++IL ++VRS FG P +D +P+++E+ Sbjct: 40 SAPARSSFGFASAWGVLSVLSILAGALRRLVPIALQPF-KAGDLSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQARTSFGPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPESKEE 219
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA) HSP 1 Score: 200 bits (508), Expect = 5.770e-61 Identity = 102/178 (57.30%), Postives = 124/178 (69.66%), Query Frame = 1 Query: 25 SVKSKFGLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKT---LSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDEKLTPMRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALPKAEE 549 S K F L++ WGVV V+++L NAI+RL P+A E F T T +P+ WA Y F MAY EGYK FQ KFSPLVVKRALTL + + V A PY MG+FHA+K R+IVSW+I +GV GLV+ VK L FPYRS+VDAGVVAGLSWG SI Y ++L G PSIDPALP ++ Sbjct: 111 SQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKK 288
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A8J6CDI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDI7_DIALT) HSP 1 Score: 179 bits (453), Expect = 1.430e-53 Identity = 94/177 (53.11%), Postives = 127/177 (71.75%), Query Frame = 1 Query: 16 GSDSVKSKFGLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDE---KLTPMRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALP 537 G+ +V + AS WGVV V+++L NAI RL+P+A E F L+P+ WASYA+ +A AY EGYKAFQ KFSPLVV RA TL + T +R+V A Y MG+FHAT+ RK++SW+I++ V +V VVKRLP+P+RS+VDAGVVAGL+WG TSI YV+++ G+ P++ LP Sbjct: 41 GASTVPMRPSAASHWGVVGVMAILANAIGRLAPIAAEPF-RYGGLAPLHWASYAATIAAFAYVEGYKAFQLKFSPLVVSRAFTLGPQGGRATALRSVLAPFYSMGLFHATRKRKVISWTISLAVIVIVGVVKRLPYPWRSIVDAGVVAGLTWGVTSIGWIYVKAIGGSLPNVSTELP 216
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA) HSP 1 Score: 178 bits (452), Expect = 2.210e-53 Identity = 87/171 (50.88%), Postives = 117/171 (68.42%), Query Frame = 1 Query: 31 KSKFGLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDEKLTPMRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALPKA 543 ++ G+A WGV L +L +AIKRL+P+A + F + LS + W Y + AY EGY AFQKKFSPLVV+RA+TL + +P+ A Y MG+ HATK RKIVSWS+++ V +V +VKRLP+P+RS+VDAGV GL+WG SI+ Y R+L GTPP +DP LP + Sbjct: 51 RNAHGIAVAWGVCGFLGILASAIKRLAPIAMQPF-LQRDLSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTLKQSTSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLPSS 220
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A7R9U4X8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4X8_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.510e-53 Identity = 93/182 (51.10%), Postives = 116/182 (63.74%), Query Frame = 1 Query: 13 GGSDSVKSKFG---LASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDEKLTPMRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALPKAEE 549 GG+ S S G +A+TWGV+ V VL N ++RL P+A E F WA+YA F FMAY EG K FQKKF P VV+RA L P+ +FA +CMG+FHA+K RKI+SWS+ IGVFG++QV KRL +P+ ++VDAG V GL WG S+ YVRSLFG PSI LP E Sbjct: 91 GGASSEASAVGYGGVAATWGVLGVFYVLLNGLRRLVPIAVEPF-QRGDFGLGLWAAYAGFAVFMAYAEGVKGFQKKFCPFVVRRAQLLKGSTNPLHCIFAPFFCMGLFHASKKRKILSWSLLIGVFGIIQVAKRLAYPWNAIVDAGAVVGLGWGCISLGATYVRSLFGQVPSISAELPSETE 271
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A7S2WJT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJT5_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.990e-51 Identity = 92/175 (52.57%), Postives = 114/175 (65.14%), Query Frame = 1 Query: 46 LASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDEKLTP-----MRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLF-GTPPSIDPALPKAEEK 552 +ASTWG + V+ +L N IKRL PVA + F S LS + W +YA + FM YTEGYKAFQ KF PLVV RA TL+ + +RA A Y MG+FHA+K R IVSWS IG+ +V VKRLP+P+RS++D GVV GLSWG SI Y+R +F G P +DP LP E K Sbjct: 125 IASTWGALGVMYILANPIKRLLPVALQPFASPGDLSAMHWVAYALWCVFMGYTEGYKAFQLKFCPLVVSRAATLERQDCRGPGWWLRAALAPLYSMGLFHASKKRLIVSWSFVIGISAIVATVKRLPYPWRSIIDGGVVFGLSWGAASIAYLYLRKIFTGQIPEVDPQLPVKEPK 299
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU) HSP 1 Score: 172 bits (435), Expect = 1.530e-50 Identity = 88/172 (51.16%), Postives = 118/172 (68.60%), Query Frame = 1 Query: 43 GLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDEKLTP---MRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALPKAEE 549 GL + WGV L +L AI RL+P+A + + ++ + W Y +AF AYTEGYKAFQ KFSPLVV+RA+TL + P + +V A Y MG+FHA+K RK VSWSI++GV ++ +VKRLP+P+RS+VDAGV GL WGGTSI Y+R+L G P +DP LPK ++ Sbjct: 72 GLRTAWGVCGFLGILAQAIGRLAPIAMQPI-LQRDITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTRSPPPPLLHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKEDK 242
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A836CMT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT5_9STRA) HSP 1 Score: 168 bits (426), Expect = 6.370e-49 Identity = 81/174 (46.55%), Postives = 117/174 (67.24%), Query Frame = 1 Query: 37 KFGLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKT--LSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDE-KLTPMRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALPKAEE 549 K G AS+WGV+ VL++ NA +RL PVA E + L+ V W YA A + Y +G +A ++KFS VV+RALTLD+ + TP+R + AGPY MG+F A + RK SW + + G+++V+K++P+P+RS+VDAGV+AGL WGG ++ Y+VRS G P +DP +PK E Sbjct: 85 KIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSE 258
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Match: A0A7S3K4D7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4D7_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.210e-48 Identity = 81/177 (45.76%), Postives = 113/177 (63.84%), Query Frame = 1 Query: 7 VKGGSDSVKSKFGLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLSPVFWASYASFVAFMAYTEGYKAFQKKFSPLVVKRALTLDEKLTPMRAVFAGPYCMGMFHATKARKIVSWSITIGVFGLVQVVKRLPFPYRSLVDAGVVAGLSWGGTSILCYYVRSLFGTPPSIDPALP 537 + G +++ + +AS WGV V+++L NA+KR+ PVA E F + L W +YA+F A M Y EGYK+F KKFSPLV R++TL + +FA Y MG+FHAT R+ SW IGVF LV++VK+ +P+RS+VD GVV GL+ G SI+ +Y R + G P DP+LP Sbjct: 42 IPSGGAALEQRPTVASVWGVAGVVAMLMNAVKRVLPVALEPFRTGSPLGAKMWCTYAAFAAVMGYVEGYKSFHKKFSPLVAARSMTLQKPHPFTYTLFAPFYAMGLFHATPKRRATSWGFLIGVFALVKIVKQFSYPWRSIVDGGVVVGLTIGSASIIWHYAREINGIPAPADPSLP 218 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1013.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1013.2.1 >prot_H-akashiwo_Contig1013.2.1 ID=prot_H-akashiwo_Contig1013.2.1|Name=mRNA_H-akashiwo_Contig1013.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=187bp MNVKGGSDSVKSKFGLASTWGVVCVLSVLYNAIKRLSPVAFEVFGSTKTLback to top mRNA from alignment at H-akashiwo_Contig1013:89338..89898- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1013.2.1 ID=mRNA_H-akashiwo_Contig1013.2.1|Name=mRNA_H-akashiwo_Contig1013.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=561bp|location=Sequence derived from alignment at H-akashiwo_Contig1013:89338..89898- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1013:89338..89898- >mRNA_H-akashiwo_Contig1013.2.1 ID=mRNA_H-akashiwo_Contig1013.2.1|Name=mRNA_H-akashiwo_Contig1013.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=561bp|location=Sequence derived from alignment at H-akashiwo_Contig1013:89338..89898- (Heterosigma akashiwo CCMP452)back to top |