mRNA_H-akashiwo_Contig1012.8.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK) HSP 1 Score: 418 bits (1074), Expect = 1.180e-144 Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 1 Query: 1 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWELLHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 639 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSM WELL VRGLVRAYTDCMAVV+MANHQKHLQ+TRHLNIKRHFLKDEVSEDRLSVEHIPGKF Sbjct: 168 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 380
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK) HSP 1 Score: 418 bits (1074), Expect = 7.490e-142 Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 1 Query: 1 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWELLHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 639 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSM WELL VRGLVRAYTDCMAVV+MANHQKHLQ+TRHLNIKRHFLKDEVSEDRLSVEHIPGKF Sbjct: 365 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 577
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK) HSP 1 Score: 418 bits (1074), Expect = 1.300e-139 Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 1 Query: 1 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWELLHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 639 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSM WELL VRGLVRAYTDCMAVV+MANHQKHLQ+TRHLNIKRHFLKDEVSEDRLSVEHIPGKF Sbjct: 541 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 753
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK) HSP 1 Score: 375 bits (962), Expect = 5.000e-123 Identity = 177/237 (74.68%), Postives = 207/237 (87.34%), Query Frame = 1 Query: 1 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWELLHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNGCYLRRNMEMLNV 711 TPCAPGVH+S+DSS ++ D+ YQ+LVGAF F++EFRPDI+F+VGKLS+FL PN DHMDAALYLAGYLRRT KGMVFGG+RDY +R++SDSDHGNCPD+GRSTSG+ VF G SLI+HKSKLQHITTL A EAELVALVL+ICEA+WV +M W+L+ R ++AYTDCMAVV+MANHQK LQ+TRHLNIKRHFL DEVSE+RLSVEHIPGK+NFTDVFTKP N RN+EMLNV Sbjct: 497 TPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLRRTPGKGMVFGGSRDYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNRVLFERNVEMLNV 733
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK) HSP 1 Score: 305 bits (780), Expect = 9.390e-98 Identity = 152/239 (63.60%), Postives = 182/239 (76.15%), Query Frame = 1 Query: 1 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGG--ARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWELLHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNGCYLRRNMEMLNV 711 TPCAPGV +S DS+ ++ D++ YQ LVG QFIREFR D +FAVG+LS++L PN DH +AA YLAGYLRRTA GMVFGG Y +R+V+DSDHG CPDT RSTSG+ V++G SLI+HKSKLQH+ TLS+AEAELVAL+LA+CEAKWV M L R + AYTD MAVV MAN Q+HLQ+TRHLNIKRHFLKDEV+E RLSV H+ GK N D+FTKPL + R E L + Sbjct: 320 TPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEAAEYLAGYLRRTADMGMVFGGRGGNPYEIRIVTDSDHGMCPDTARSTSGVSVYIGHSLIIHKSKLQHLVTLSSAEAELVALILAVCEAKWVRGMLTALTRRRPHMTAYTDSMAVVQMANQQQHLQRTRHLNIKRHFLKDEVAEGRLSVRHVRGKENTADIFTKPLARVHFERLREALGI 558
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: UPI001C272154 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C272154) HSP 1 Score: 142 bits (358), Expect = 8.480e-37 Identity = 78/224 (34.82%), Postives = 125/224 (55.80%), Query Frame = 1 Query: 1 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWEL-LHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 669 TP L D+ D Y+ L+G ++ RPDI+FAV KLS FL P DH+ AA + YL+ T G+ + G D ++ + SD+D CPDT RS SG +F+G SLI KSK QH + S+AE E +++ LA CE W+ ++ + ++++ + Y D A V+++++ ++T+H+ I H ++D++ E + H+ D+FTKPL Sbjct: 138 TPMDSIKQLQQDADPSLEDPAVYRRLIGRLVYLCITRPDITFAVNKLSPFLSKPCSDHLFAAERVLKYLKGTVGHGLFYSGQADLSLSIFSDADWAGCPDTRRSISGFCLFLGTSLISWKSKKQHTVSRSSAEDEYMSMALACCEVVWIIALLKDFGINMQQPIPLYCDSQAAVHISSNPVFHERTKHIEIDCHTVRDKILEGVIKTVHVHNNNQLADIFTKPL 361
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: UPI000B8C943D (uncharacterized protein LOC110818467 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C943D) HSP 1 Score: 139 bits (351), Expect = 2.780e-36 Identity = 73/241 (30.29%), Postives = 131/241 (54.36%), Query Frame = 1 Query: 4 PCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWEL-LHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTK---PLNGCYLRRNMEMLNVH 714 P P + +S D D+ +Y+ L+G ++ RPDI ++V +LS+FL +P H+ AAL + Y++RT +G+ F + ++ SD+D CPDT RS +G VF+G SLI KSK Q + + S+AEAE ++ CE W+ + +L + +G Y D A +++A++ + ++ +H+ HF+++++ + + HI + D+ TK P+ L M +N++ Sbjct: 82 PMDPNIKMSKDDGELLSDITSYRRLIGKLLYLIISRPDICYSVNRLSQFLAAPRTSHLQAALRILQYIKRTPGQGLFFPSSSAIQIKAFSDADWATCPDTRRSITGFCVFLGSSLISWKSKKQQVVSRSSAEAEYRSMANTTCEIVWILKLLRDLKVQHQGPALLYCDNQAALHIASNPMYHERIKHIEFDCHFVREKIQDGTVKTMHISTRNQLADIITKVLHPVQFANLLSKMGTINLY 322
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: A0A2Z6PIW5_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6PIW5_TRISU) HSP 1 Score: 145 bits (367), Expect = 2.800e-36 Identity = 84/242 (34.71%), Postives = 137/242 (56.61%), Query Frame = 1 Query: 1 TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWEL-LHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLN-GCY--LRRNMEMLNVH 714 TP P + LS DS D Y+ LVG ++ RP+I++AV KLS+FL +P DHM A L++ YL+ KG+ FG +++ SDSD G CPDT RST+G F+G SL+ KSK Q++ + S++EAE AL A CE +W+ + + + +G Y D + +++A + ++T+H+ I H ++D++ L + + K D+ TK L+ G + L+ + +L++H Sbjct: 845 TPMQPHLQLSKDSGTLLTDPTAYRRLVGRLLYLTHSRPEIAYAVSKLSQFLSTPTNDHMLAGLHVLKYLKNNPGKGLFFGSTSTISLKGFSDSDWGACPDTRRSTTGYCFFIGHSLVSWKSKKQNVVSRSSSEAEYRALAQATCEGQWLLYLLQDFSIQHQGPFILYCDNQSALHIAANPVFHERTKHIEIDCHVVRDKIQAGILHLLPVGSKDQVADILTKSLHPGPFNSLQTKLGLLDIH 1086
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: UPI0009AB860F (uncharacterized protein LOC109950837 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB860F) HSP 1 Score: 141 bits (355), Expect = 4.800e-36 Identity = 85/242 (35.12%), Postives = 134/242 (55.37%), Query Frame = 1 Query: 4 PCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWEL--LHVRGLVRAYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLNG---CYLRRNMEMLNVH 714 P G+ LS D D Y+ LVG ++ RPDI+ +V LS+F+ +P HM+AAL + YL+++ +G++ D T+R DSD CP+T RST+G VF+G SLI KSK Q +LS+AEAE ++ A CE W+ S+ +L LH R Y D A +++A + ++TRH+ + HF++D++ E ++ +H+ D+ TK L L R + +L++H Sbjct: 180 PMEKGLKLS-DKGELLKDPTQYRRLVGRLIYLTITRPDITSSVHVLSRFMHAPRKPHMEAALRILRYLKKSPGQGILLSSQNDLTLRAFCDSDWAGCPNTRRSTTGYCVFLGSSLISWKSKRQKTVSLSSAEAEYRSMAAACCELSWLRSLLKDLRILH-RQFALLYCDNKAALHIAANPVFHERTRHIEMDCHFIRDKIQEGLIATQHVSSSSQLADILTKALGREEFNNLVRKLRVLDIH 419
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Match: O82607_ARATH (T2L5.9 protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=O82607_ARATH) HSP 1 Score: 144 bits (364), Expect = 7.190e-36 Identity = 81/240 (33.75%), Postives = 130/240 (54.17%), Query Frame = 1 Query: 4 PCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMPWELLHVRGLVR-AYTDCMAVVYMANHQKHLQQTRHLNIKRHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL---NGCYLRRNMEMLNV 711 P P + LS D Y+SLVG ++ RPDI+FAV KL ++ +P H+ + Y++ T +G+ + D T++ +DSD G CPDT RST+GL +F+G SLI +SK Q + S+AEAE AL LA CE W+ S+ +L + G V ++D A +Y+A + ++T+H+ I H +++ + + + + H+ + D+ TKPL YL M + N+ Sbjct: 1001 PMVPNLKLSKADGELLEDREFYRSLVGKLMYLTITRPDITFAVNKLCQYSAAPRTSHLTTVYKVLQYIKGTVGQGLFYSSDPDLTLKGFADSDWGTCPDTRRSTTGLTMFLGSSLITWRSKKQPTVSRSSAEAEYRALALASCEMVWLASLLLDLKIITGSVPIVFSDSTAAIYIATNPVFHERTKHIEIDCHLVRERLDKGLIRMLHVRTEDQVADILTKPLFPHQFSYLMSKMSLHNI 1240 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1012.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1012.8.1 >prot_H-akashiwo_Contig1012.8.1 ID=prot_H-akashiwo_Contig1012.8.1|Name=mRNA_H-akashiwo_Contig1012.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=239bp TPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFback to top mRNA from alignment at H-akashiwo_Contig1012:263398..264114+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1012.8.1 ID=mRNA_H-akashiwo_Contig1012.8.1|Name=mRNA_H-akashiwo_Contig1012.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=717bp|location=Sequence derived from alignment at H-akashiwo_Contig1012:263398..264114+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1012:263398..264114+ >mRNA_H-akashiwo_Contig1012.8.1 ID=mRNA_H-akashiwo_Contig1012.8.1|Name=mRNA_H-akashiwo_Contig1012.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=717bp|location=Sequence derived from alignment at H-akashiwo_Contig1012:263398..264114+ (Heterosigma akashiwo CCMP452)back to top |