mRNA_H-akashiwo_Contig1012.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1012.1.1
Unique NamemRNA_H-akashiwo_Contig1012.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: A0A8J1U1R3_OWEFU (Ofus.G082302 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U1R3_OWEFU)

HSP 1 Score: 170 bits (431), Expect = 8.510e-46
Identity = 107/288 (37.15%), Postives = 155/288 (53.82%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIEQRTIHFTAHKHSAN--RKRGH----VPYLEFSVGRRE------SSAESIQYDGDVDDGEGDFPEGFHNFDQVKAVMEP-FGFSDREITVLLGAHTLGNAKTIHSGYEGNWVEEIRRFNNEYYKAILNPAMNWTMERITS--DIGERWQWTAVGDNGPAKLMMLDADMGLYLDFEPGE-TGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHHGY 816
            VRL+FHDCVGGCDG +NL NP N GL+  +     ++     + S  ++RAD WAL        TA++ +A   R RG     +P +EF  GRR+      SSAE I            FP+     D  ++     FGF+ RE   +LGAHTLG A+  +SG+   WV   R  +N+YY+ +LN   NW    + +  + G +WQW     +G  + +ML+ADM L+ + E    TG+ GC ++    N CP N+  A +VQE ANDN ++++E+G  F KM+  GY
Sbjct:  234 VRLAFHDCVGGCDGCINLDNPENVGLDEYI----NMIDEAFIVYSDIISRADFWALAS-----ITANERAAEDCRPRGRCTPSIPMIEFQTGRRDCATSPLSSAEHI------------FPDPHGGLDPTESFFASVFGFNRRESVAILGAHTLGRARRQNSGFRNPWVGRERTLDNDYYRELLNIDRNWNQVDVANGRNGGPKWQWV----HGDGRRLMLNADMCLFKEMELSSGTGESGCPYSGT--NACP-NSAAAGIVQEFANDNALWIQEYGAAFQKMIATGY 493          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: A0A6V1P7P8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7P8_HETAK)

HSP 1 Score: 166 bits (421), Expect = 1.250e-44
Identity = 100/294 (34.01%), Postives = 142/294 (48.30%), Query Frame = 1
Query:    4 RLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIEQRTIHFTAHKHSANRKRGHVPYLEFSVGRRESSAESIQYDGDVDDGEGDFPEGFHNFDQVKAVMEPFGFSDREITVLLGAHTLGNAKTIHSGYEGNWVEEIRRFNNEYYKAIL------NPAMNWTMERITSD---------IGERWQWTAVG-----DNGPAKLMMLDADMGLYLDFE-----PGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHH 810
            RL+FHDC+GGCDG V+L N  N+GL   + ++  +   +Q      ++RAD W L E R I     +          P  EF VGR    A S      +D+ EG FP    N+  +   M  F  +D+E+T L+G H++GN K  +SGY+G W  +  R  N+YY+ +L      N ++NW   RI +          +G +WQW         D GP  +MML+ DM L LDFE       E+G+V     A +   C  N++T   V E A     +  +F  VF KML H
Sbjct:   63 RLAFHDCIGGCDGCVDLTNKENNGLLAAVNELEDLTEYIQE-NIVNISRADVWTLAEMRAIVLGMSRDDLE------PDFEFEVGRSNCEAGSA-----LDEYEGHFPNAALNYTGMVEAMADFNLTDQELTALMGIHSIGNCKVANSGYQGEWATDAERLTNDYYELLLDMDSTTNISVNWHQVRIPNTGVYGKTGELVGTKWQWNGTTYPDKLDGGPRPIMMLNVDMALVLDFEVKNITDEESGEV----PACNFTTCSYNSKTIDYVNEYARSKRTWATDFSKVFQKMLKH 340          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: A0A8J1T6Q9_OWEFU (Ofus.G012090 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1T6Q9_OWEFU)

HSP 1 Score: 147 bits (372), Expect = 2.670e-38
Identity = 97/286 (33.92%), Postives = 136/286 (47.55%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIEQRTIHFTAHKHSANRKRGHVPYLEFSVGRRESSAESIQYDGDVDDGEGDFPE--GFHNFDQVKAVMEP-FGFSDREITVLLGAHTLGNAKTIHSGYEGNWVEEIRRFNNEYYKAILNPAMNWTMERITSDIGERWQWT-----------AVGDNGPAKLMMLDADMGLYLDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHHGY 816
            VRL+FHDCVGGCDG VNLANP N GL   + D+  V  N + + S    RAD W L     +     + +A   R  +P+L   VGR + S      D +       FP   G  N   V    +  F   +R+   +LGAHTLG A+T  SG+ G WV     F+N YY+ +L+  + W    I     +RWQW              G  GP   MML++DM L  D      G+  C + + + +P      T S+V+E AN+N +++ E+    T M  +GY
Sbjct:   56 VRLAFHDCVGGCDGCVNLANPDNDGLRPYIRDLEDVYANFEGIIS----RADFWQLAGLEAL-----ERAAGTDRPDIPFL---VGRIDCSTSPDTSDVEA------FPTNGGHGNLGNVLDFFQSGFNLGERDAVAILGAHTLGRARTGASGFNGPWVRNEDLFDNAYYRDLLDENLMWIQTNINPTGEDRWQWVHGRAGGRRGKRQAGGGGP---MMLNSDMCLVKDITADSDGRSSCNYFSCADSP------TFSIVEEYANNNALWVSEYSRAHTIMTSNGY 314          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: A0A1S3JE50_LINUN (putative ascorbate peroxidase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JE50_LINUN)

HSP 1 Score: 145 bits (365), Expect = 6.910e-38
Identity = 101/289 (34.95%), Postives = 145/289 (50.17%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIEQRTIHFTAHKHSANRKRGHV--------PYLEFSVGRRE--SSAESIQYDGDVDDGEGDFPEGFHNFDQVKAV-MEPFGFSDREITVLLGAHTLGNAKTIHSGYEGNWVEEIRRFNNEYYKAILNPAMN--WTMERITSDIGERWQWTAVG-DNGPAK---LMMLDADMGLYLDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHHGY 816
            VRL+FHDCVGGCDG VNL N  N GL+T   ++  V  N +      ++RAD WAL        TA   +A  +  H         P + F  GR++  +S  + Q           FP+G  +   VK+     FG + RE   LLGAHTLG A+   SG+ G WV      +N YY+ +++ ++   WT   +     +RWQW A   + G AK   + ML+ DM LY D +    G+  C  AA     C  +  TAS+++E A +N ++M+EF   F KM+ +GY
Sbjct:   54 VRLAFHDCVGGCDGCVNLDNADNSGLQTTARELNKVYDN-EGFNKL-MSRADFWALAS-----VTALDIAAGFQECHTVLCLWLPRPEITFRWGRKDCPTSPSTSQVRS--------FPDGHGDLSSVKSFGNHTFGLNLRETVALLGAHTLGTAQKNQSGWNGKWVWNQHTLSNLYYQELISKSLRRPWTQINVGKR-SDRWQWNAQSNEGGKAKGGTIFMLNTDMSLYKDIKVDSQGRSSCPTAAT----CGAS-ETASIMEEYAANNALWMKEFSAAFEKMISYGY 321          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: A0A553PF96_TIGCA (PEROXIDASE_4 domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PF96_TIGCA)

HSP 1 Score: 141 bits (355), Expect = 2.440e-36
Identity = 98/283 (34.63%), Postives = 141/283 (49.82%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIEQRTIHFTAHKHSANRKRG--------HVPYLEFSVGRRESSAESIQYDGDVDDGEGDFPEGFHNFDQVKAVMEP-FGFSDREITVLLGAHTLGNAKTIHSGYEGNWVEEIR---RFNNEYYKAILNPAMNWTMERITSDIG--ERWQWTAVGDNGPAKLMMLDADMGLY--LDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKM 801
            +RL+FHDCVG CDG +N  NPAN GLE I  +I     N+  L    ++RAD + L     +  T   ++ +   G          P L F +GR +  +       D +D   +FP+GF N  +V A M+  F  + R+   +LGAHTLG      SG++G+W  +     +F+N YYK +L+ ++ WT           +RWQWT    NG     MLDAD+ L   LD E  E G   C     S   CP +  T S+VQE AND  +++++F   F +M
Sbjct:   53 LRLAFHDCVGYCDGCLNFGNPANGGLEDIYVEINDFYKNVLPLNGKTMSRADFFNLAGIVAVDTTVDYNNISCDEGLDPDCITMPKPPLRFLMGREDCVSSP-----DTEDNH-EFPQGFMNHAEVMATMKRIFDLNTRQTVAILGAHTLGEMTRAGSGFDGSWKAQSDNKFKFDNRYYKFLLDDSITWTHRDANEGRSPDQRWQWTG-RTNGEEIANMLDADIDLVKLLDIED-EGGHSTC-----SFEDCP-DAPTKSIVQEYANDEAVWVKDFADAFERM 321          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: A0A8J1T7U3_OWEFU (Ofus.G012089 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1T7U3_OWEFU)

HSP 1 Score: 141 bits (356), Expect = 3.200e-36
Identity = 97/287 (33.80%), Postives = 131/287 (45.64%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIEQRTIHFTAHKHSANRKRGHVPYLEFSVGRRESSAESIQYDGDVDDGEGDFPE--GFHNFDQVKAVMEP-FGFSDREITVLLGAHTLGNAKTIHSGYEGNWVEEIRRFNNEYYKAILNPAMNWTMERITSDIGERWQWT------------AVGDNGPAKLMMLDADMGLYLDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHHGY 816
            VRL+FHDCVGGCDG VNLANP N GL   + D+  V  N   + S    RAD W L     +   +   S        P + F VGR + S      D +       FP   G  N   V    +  F   +R+   LLGAHTLG A+T  SG+ G WV     F+N YY+ +LN  + W    I     +RWQW              V   GP   MML++DM L  D      G+  C + + + +P      T S+V+E AN+N +++ E+      M  +GY
Sbjct:   57 VRLAFHDCVGGCDGCVNLANPDNAGLRPYIRDLEVVYANFDDVIS----RADFWQLAGLEALDRASETDS--------PDIPFLVGRVDCSTSPDTSDLEA------FPTNGGHGNLGNVLDFFQSEFNLGERDAVALLGAHTLGRARTGASGFNGPWVGNPDLFDNAYYRDLLNENLMWIQTNINPTGEDRWQWVHGRAPGGPRGKRQVAGGGP---MMLNSDMCLVKDITVDSDGRSSCNYFSCADSP------TLSIVEEYANNNALWVSEYSRAHAIMTSNGY 316          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: UPI000C7715DF (putative ascorbate peroxidase n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7715DF)

HSP 1 Score: 135 bits (339), Expect = 3.080e-34
Identity = 94/277 (33.94%), Postives = 136/277 (49.10%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIEQRTIHFTAHKHSA--NRKRGHVPY--LEFSVGRRESSAESIQYDGDVDDGEGDFPEGFHNFDQVKAVM-EPFGFSDREITVLLGAHTLGNAKTIHSGYEGNWVE-EIRRFNNEYYKAILNPAMNWTMERITSDIGERWQWTAVGDNGPAKLMMLDADMGLYLDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHHG 813
            VRL FHDCVGGCDG VN+ +P+N GL+ I+  +    TN +   S  ++RAD W       +  T  + +A  +     VP   L F+ GR++ +        D  DG    P    N++ V     + FGF+D E   L+G HTLG A +  SGY+G WV  E   FNN YY  + +         +T     + QW +         MML+ADMGL+ DF   + G+  C + +    P       A+ V E +  N  ++R+F  VFTKM++HG
Sbjct:   44 VRLVFHDCVGGCDGCVNINDPSNAGLQNIIERLDKAYTNKRTGYSSLMSRADFWVYASLYALKNTTAQANAACSEAACAVPESSLVFTTGRKDCATAPFT---DSIDG---LPGANLNYEGVVDYFRDEFGFTDDESIALMGVHTLGAAHSTASGYQGPWVRGETTLFNNHYYSTMSSSGWRQRNVDLTGS-SPKVQWNS------GTGMMLNADMGLFKDFTLNDNGEASCTYDSCGATP------GAAKVLEYSKSNADWVRDFESVFTKMINHG 301          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: UPI000C759335 (putative ascorbate peroxidase n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C759335)

HSP 1 Score: 136 bits (343), Expect = 3.230e-34
Identity = 89/277 (32.13%), Postives = 138/277 (49.82%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIE----QRTIHFTAHKHSANRKRGHVPYLEFSVGRRESSAESIQYDGDVDDGEGDFPEGFHNFDQVKAVM-EPFGFSDREITVLLGAHTLGNAKTIHSGYEGNWVE-EIRRFNNEYYKAILNPAMNWTMERITSDIGERWQWTAVGDNGPAKLMMLDADMGLYLDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHHG 813
            VRLSFHDCVGGC+G +N+ +  N GL  ++ ++  +    Q ++ F ++RAD WA         T+     K ++ +     P L F  GR + +        +  DG   FP    NF  V     + FGF+++E   L+G HT+G A   HSG++G+WVE E   FNN+YY+ + N + NW    + +    +WQW A  + G     ML++DM +Y +      G   C     S   CP  +  A  V+  A  N  ++ +F  V+TK++ HG
Sbjct:  112 VRLSFHDCVGGCNGCLNIEDRDNAGLGDLIIELETLYKGKQ-ISRF-MSRADFWAYAGIYAVNATVEIANSKCNSTKCLVPNPGLVFKTGRGDCATSPYT---NTRDG---FPGPHLNFSGVAGYFHDKFGFTEQETVALMGVHTIGQAHYHHSGFKGSWVENENTAFNNKYYQILANQSNNWVQNNVGNTTTPQWQWNAANNVG----FMLNSDMAIYKEVALSSDGVSSC-----SYTTCP-KSAGAFYVELYAASNAEWIPDFAAVYTKLISHG 370          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: A0A1S3JPA7_LINUN (putative ascorbate peroxidase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JPA7_LINUN)

HSP 1 Score: 134 bits (336), Expect = 1.580e-33
Identity = 92/278 (33.09%), Postives = 135/278 (48.56%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFP--LNRADAWALIEQRTIHFTAHKHSANRKRGHVPYLEFSVGRRESSAESIQYDGDVDDGEGDFPEGFHNFDQ-VKAVMEPFGFSDREITVLLGAHTLGNAKTIHSGYEGNWVEEIRRFNNEYYKAILNPAMNWTMERITSDIGE--RWQWTAVGDN-GPAKLMMLDADMGLYLDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHHGY 816
            VRL FHDCVGGCDG +NL NP N GL+T        + +L A       ++RAD +AL         + K  + + +   P + F  GRR+     I  +  V      FP    N  + V      F  +  ++  +LGAHTLG+A+   SG++G WV E   F+N++Y+ + +    W  E    D     RWQW A     G   +MML+ DM L+ +  P   G+V      A ++ CP ++R A  V+  A+DN  F+ +F   + KML  GY
Sbjct:   65 VRLGFHDCVGGCDGCINLNNPDNAGLDTTF----NALNDLYARERIDRIMSRADFFALAGIVGAEVGS-KMKSGQSQVQSPRIPFHWGRRDCPTSPITTEMRV------FPNALGNLTETVDYFRRVFDLTPEQLAAVLGAHTLGDARKDASGFDGEWVIERDVFDNDFYRVLSDKTQLWVQENENPDDPNKPRWQWNAKKHREGKEGIMMLNTDMELFKNTAPNSDGRVTS--CPADVSTCP-SSRLADRVKLYASDNAKFLADFSVAYGKMLTTGY 328          
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Match: A0A8J1TJG2_OWEFU (Ofus.G04151 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TJG2_OWEFU)

HSP 1 Score: 130 bits (327), Expect = 6.740e-32
Identity = 88/276 (31.88%), Postives = 133/276 (48.19%), Query Frame = 1
Query:    1 VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNRADAWALIEQRTIHFTAHKHSANR-KRGHVPYLEFSVGRRE---SSAESIQYDGDVDDGEGDFPEGFHNF-DQVKAVMEPFGFSDREITVLLGAHTLGNAKTIHSGYEGNWVEEIRRFNNEYYKAILNPAMNWT-MERITSDIGERWQWTAVGDNGPAKLMMLDADMGLYLDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELANDNGMFMREFGPVFTKMLHH 810
            VRL+FHDCVGGCDG +N  N  N GL+     +  + TN  A     L+RAD +AL     +   A        +R   P + F  GR +   S   +I +          FP+      DQV      F F++RE   ++GAHTLG A T  SG++G WV      ++ +Y+ ++     W  ++        R+QW A    G   +MML+AD+G++LD +P   G   C +       CPL++ T  +V E A  N  ++ +FGP F K++ +
Sbjct:  110 VRLAFHDCVGGCDGCINHNNADNAGLKVYSDQLDAIYTNYSA----KLSRADFYALAGITAVERGAELAGCPPGERQCTPQITFRYGRVDCPTSPNTNIVHA---------FPDAHRGVGDQVSFFSREFEFTERETIAIVGAHTLGRAHTGASGFDGRWVSNPDALDHTFYRFMMEGDRMWAQVDNTPGGTSRRYQWEAHA--GLDDVMMLNADIGMFLDIQPDAEGVASCGYF-----DCPLSS-TEGIVAEYAQSNPAWIADFGPAFNKLIEN 364          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1012.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J1U1R3_OWEFU8.510e-4637.15Ofus.G082302 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A6V1P7P8_HETAK1.250e-4434.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J1T6Q9_OWEFU2.670e-3833.92Ofus.G012090 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A1S3JE50_LINUN6.910e-3834.95putative ascorbate peroxidase n=1 Tax=Lingula ungu... [more]
A0A553PF96_TIGCA2.440e-3634.63PEROXIDASE_4 domain-containing protein n=1 Tax=Tig... [more]
A0A8J1T7U3_OWEFU3.200e-3633.80Ofus.G012089 protein n=1 Tax=Owenia fusiformis Tax... [more]
UPI000C7715DF3.080e-3433.94putative ascorbate peroxidase n=1 Tax=Eurytemora a... [more]
UPI000C7593353.230e-3432.13putative ascorbate peroxidase n=1 Tax=Eurytemora a... [more]
A0A1S3JPA7_LINUN1.580e-3333.09putative ascorbate peroxidase n=1 Tax=Lingula ungu... [more]
A0A8J1TJG2_OWEFU6.740e-3231.88Ofus.G04151 protein (Fragment) n=1 Tax=Owenia fusi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1012contigH-akashiwo_Contig1012:38953..39768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog400682.PAC_15713955
PFAMsperoxidase
Model size816
Max annot lvl33208|Metazoa
KEGG koko:K00428
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.09e-29
EggNOG OGsCOG0685@1|root,2QR1E@2759|Eukaryota,38E3T@33154|Opisthokonta,3C266@33208|Metazoa
EC1.11.1.5
DescriptionPeroxidase
Cds size816
COG categoryE
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387050.9239805-CDS-H-akashiwo_Contig1012:38952..397681681387050.9239805-CDS-H-akashiwo_Contig1012:38952..39768Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1012 38953..39768 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1012.1.1prot_H-akashiwo_Contig1012.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1012 38953..39768 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1012.1.1

>prot_H-akashiwo_Contig1012.1.1 ID=prot_H-akashiwo_Contig1012.1.1|Name=mRNA_H-akashiwo_Contig1012.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=272bp
VRLSFHDCVGGCDGAVNLANPANHGLETILADIGGVVTNLQALTSFPLNR
ADAWALIEQRTIHFTAHKHSANRKRGHVPYLEFSVGRRESSAESIQYDGD
VDDGEGDFPEGFHNFDQVKAVMEPFGFSDREITVLLGAHTLGNAKTIHSG
YEGNWVEEIRRFNNEYYKAILNPAMNWTMERITSDIGERWQWTAVGDNGP
AKLMMLDADMGLYLDFEPGETGKVGCKWAAASLNPCPLNTRTASVVQELA
NDNGMFMREFGPVFTKMLHHGY
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mRNA from alignment at H-akashiwo_Contig1012:38953..39768-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1012.1.1 ID=mRNA_H-akashiwo_Contig1012.1.1|Name=mRNA_H-akashiwo_Contig1012.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=816bp|location=Sequence derived from alignment at H-akashiwo_Contig1012:38953..39768- (Heterosigma akashiwo CCMP452)
GTCCGGTTGAGCTTCCACGACTGTGTTGGTGGGTGTGACGGCGCAGTTAA CCTGGCCAACCCAGCAAACCATGGCCTGGAGACAATTTTGGCTGATATTG GGGGTGTTGTGACCAATCTTCAAGCACTGACGTCATTTCCCCTGAATCGA GCAGATGCCTGGGCCCTGATCGAGCAAAGAACAATTCACTTCACTGCCCA CAAACACAGCGCCAACAGGAAAAGAGGACATGTTCCTTATCTTGAATTCA GTGTGGGAAGAAGAGAGAGCAGCGCAGAGTCAATTCAGTATGACGGCGAT GTTGATGATGGTGAGGGTGACTTCCCAGAGGGCTTTCACAACTTTGATCA GGTAAAGGCTGTGATGGAGCCTTTTGGCTTTTCCGATCGTGAGATCACAG TGCTCTTAGGGGCACACACACTTGGAAATGCAAAAACCATCCATTCAGGC TATGAAGGTAACTGGGTGGAGGAGATTCGCCGCTTTAACAATGAATATTA CAAGGCCATACTGAATCCAGCAATGAATTGGACAATGGAAAGGATCACAT CAGATATTGGAGAGCGCTGGCAATGGACAGCGGTTGGCGATAATGGCCCA GCAAAGCTCATGATGCTGGATGCAGACATGGGTCTGTACCTTGATTTTGA GCCCGGAGAAACTGGGAAGGTGGGTTGTAAGTGGGCCGCAGCTTCACTGA ACCCCTGTCCTTTAAACACTCGCACAGCCTCAGTTGTGCAGGAGCTAGCA AATGATAATGGAATGTTCATGCGCGAGTTTGGCCCAGTCTTCACCAAAAT GCTCCACCATGGATAC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1012:38953..39768-

>mRNA_H-akashiwo_Contig1012.1.1 ID=mRNA_H-akashiwo_Contig1012.1.1|Name=mRNA_H-akashiwo_Contig1012.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=816bp|location=Sequence derived from alignment at H-akashiwo_Contig1012:38953..39768- (Heterosigma akashiwo CCMP452)
GTCCGGTTGAGCTTCCACGACTGTGTTGGTGGGTGTGACGGCGCAGTTAA
CCTGGCCAACCCAGCAAACCATGGCCTGGAGACAATTTTGGCTGATATTG
GGGGTGTTGTGACCAATCTTCAAGCACTGACGTCATTTCCCCTGAATCGA
GCAGATGCCTGGGCCCTGATCGAGCAAAGAACAATTCACTTCACTGCCCA
CAAACACAGCGCCAACAGGAAAAGAGGACATGTTCCTTATCTTGAATTCA
GTGTGGGAAGAAGAGAGAGCAGCGCAGAGTCAATTCAGTATGACGGCGAT
GTTGATGATGGTGAGGGTGACTTCCCAGAGGGCTTTCACAACTTTGATCA
GGTAAAGGCTGTGATGGAGCCTTTTGGCTTTTCCGATCGTGAGATCACAG
TGCTCTTAGGGGCACACACACTTGGAAATGCAAAAACCATCCATTCAGGC
TATGAAGGTAACTGGGTGGAGGAGATTCGCCGCTTTAACAATGAATATTA
CAAGGCCATACTGAATCCAGCAATGAATTGGACAATGGAAAGGATCACAT
CAGATATTGGAGAGCGCTGGCAATGGACAGCGGTTGGCGATAATGGCCCA
GCAAAGCTCATGATGCTGGATGCAGACATGGGTCTGTACCTTGATTTTGA
GCCCGGAGAAACTGGGAAGGTGGGTTGTAAGTGGGCCGCAGCTTCACTGA
ACCCCTGTCCTTTAAACACTCGCACAGCCTCAGTTGTGCAGGAGCTAGCA
AATGATAATGGAATGTTCATGCGCGAGTTTGGCCCAGTCTTCACCAAAAT
GCTCCACCATGGATAC
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