mRNA_H-akashiwo_Contig1011.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A7S3XPM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPM9_HETAK) HSP 1 Score: 427 bits (1099), Expect = 6.140e-150 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 Query: 1 MLYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGLIVLKVFWRDHRRVSAAAAYLFLFGLALNVLVPLFKVYERLEARDGGGGGNTGVQQEARG 669 MLYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGLIVLKVFWRDHRRVSAAAAYLFLFGLALNVLVPLFKVYERLEARDGGGGGNTGVQQEARG Sbjct: 78 MLYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGLIVLKVFWRDHRRVSAAAAYLFLFGLALNVLVPLFKVYERLEARDGGGGGNTGVQQEARG 300
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A6V1XUJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XUJ0_HETAK) HSP 1 Score: 127 bits (319), Expect = 8.170e-31 Identity = 80/204 (39.22%), Postives = 111/204 (54.41%), Query Frame = 1 Query: 4 LYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGLIVLKVFWRDHRRVSAAAAYLFLFGLALNVLVPLFKVYERLE 615 L+ ++ A F AF AM T W T+ + IGA MC G++GY SFR TEGDILDNF G + + +K +I+HL Y+P+ F++ RHS +F +V M +++LT +LL VMAL+ V+EG+AFGYILD TG L ++S PG LK+ R A L +FG VL P +Y +E Sbjct: 257 LFALSCAYAAFHAFEAMRRNTGAAWAGATTPAVVIGAGMCTSMGLAGYLSFRDYTEGDILDNFSG-SGWDFMKILLIIHLLLYIPIDFVVMRHSVCKIF-GWNVDTMHIAPYLVLTAILLAFTAGCVMALYAVGVAEGDAFGYILDFTGGLTAPILSFICPGAFYLKLMPRKDAPNWDLAFALLIFGFITIVLAPAATIYSIVE 458
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A6V1M2K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M2K4_HETAK) HSP 1 Score: 115 bits (289), Expect = 2.460e-27 Identity = 64/166 (38.55%), Postives = 103/166 (62.05%), Query Frame = 1 Query: 1 MLYGVNSQSATFFAFNAMA--VRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGL 492 +++ + A F AF ++ ++T QW +V+S+ + +G MC + G++GY FR +T GDILDNF G F K ++ HL Y+P+ F++ RHSF + L D +E+ + ++++TV LL VVM L++ VSEG+AFGYILD+TG + ++ LPG+ Sbjct: 122 VVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQG-PNFYFFKVLLVTHLILYIPLDFVVMRHSFCKV-LGTDAIELPTGRYVVVTVGLLTFSLGVVMVLYYAGVSEGDAFGYILDLTGGVGNAMLGFVLPGI 285
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A6V2Y555_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Y555_HETAK) HSP 1 Score: 115 bits (289), Expect = 1.520e-26 Identity = 64/166 (38.55%), Postives = 103/166 (62.05%), Query Frame = 1 Query: 1 MLYGVNSQSATFFAFNAMA--VRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGL 492 +++ + A F AF ++ ++T QW +V+S+ + +G MC + G++GY FR +T GDILDNF G F K ++ HL Y+P+ F++ RHSF + L D +E+ + ++++TV LL VVM L++ VSEG+AFGYILD+TG + ++ LPG+ Sbjct: 258 VVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQG-PNFYFFKVLLVTHLILYIPLDFVVMRHSFCKV-LGTDAIELPTGRYVVVTVGLLTFSLGVVMVLYYAGVSEGDAFGYILDLTGGVGNAMLGFVLPGI 421
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A7S2V5U5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5U5_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.910e-26 Identity = 66/201 (32.84%), Postives = 119/201 (59.20%), Query Frame = 1 Query: 1 MLYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGLIVLKVFWRDHRRVSA---AAAYLFLFGLALNVLVPLF 594 +++ V + +FFAFN++ ++ +W V++ +G MC + G+SGY SFR AT G+IL NF G A+ K ++ HL Y+P+ F++ RHS +F K + ++ + FI+L+V+LL + A+V+ L+ ++EGE F ++ +TG + +S LPG + LKVF ++ + +A L +G+ + ++VP + Sbjct: 256 VVFAVTYITGSFFAFNSLELKNQARWPIVSAKASCMGTFMCFITGLSGYLSFRSATNGEILLNFSGGWAY-FTKTLLVAHLLLYIPIDFVVMRHSLVKLFNK-EAEKLHTAPFIVLSVMLLAVTTALVVFLYSKGLAEGELFSSVISLTGGVALAFVSFVLPGAVFLKVFAKEIKLYQTWYWMSAGLLCWGITVMIIVPYY 454
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A835Z8W9_9STRA (Aa_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W9_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.120e-9 Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 1 MLYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVG 198 +++ ++ A A+ + TPEQWRKV SI +A+G+ +C GI GY SFRGAT G+IL+NF G Sbjct: 153 VIFALSFAPAALHAYMGLVPCTPEQWRKVVSIAIAVGSVVCYTTGIIGYLSFRGATLGNILENFDG 218
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A553PPC2_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PPC2_TIGCA) HSP 1 Score: 61.6 bits (148), Expect = 1.980e-7 Identity = 53/189 (28.04%), Postives = 89/189 (47.09%), Query Frame = 1 Query: 31 TFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFV-GHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLK-LDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGLIVLKV---FWRDHRRVSAAAAYLFLFGLALNVL 582 +F FN+MA + +W +VT+ ++ I + LL G GY +FRG T+GD+L+N+ G V + V + F P+ + R F + + E + LLT++L+ +P A+ M G +LD+ G ++ LPG+ L+V W D + A L FG+ + V+ Sbjct: 242 SFLLFNSMANPSISKWNQVTNWSVGISMIVVLLLGFGGYVTFRGGTQGDVLNNYCWGDDLANVARLVFCVTVLFTYPIECFVCREVFENIITGFIGHFERTTGFHYLLTIILVALPCALSMGT--------SCLGIVLDLNGLGFALPLAYILPGICYLRVNNGSWYDWD--NMVALMLATFGIGVTVI 420
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A8J1UX69_OWEFU (Ofus.G23436 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UX69_OWEFU) HSP 1 Score: 58.5 bits (140), Expect = 1.860e-6 Identity = 45/161 (27.95%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 34 FFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFVGHAAFTVV---KFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGLIVLKV 507 F + +++ RT W KVT ++ A +L GI GYS+F+G T+GD+L+N+ F V F VIV L + P+ ++R +F + +I +LT+VL+G+ FA + + +L + G++ + P L +KV Sbjct: 278 FLVYESLSERTLNTWNKVTHLSCLYSALCLILTGICGYSTFKGYTQGDLLENYCYKDDFANVFRVVFTVIVALTY--PIECFVTREVIENVFFSKY--KESTIRHAILTIVLVGVAFA--------AATITDCLHIVLSINGSISAVPLIFIFPALFYMKV 426
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: A0A7S1ADI4_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADI4_NOCSC) HSP 1 Score: 58.2 bits (139), Expect = 2.400e-6 Identity = 49/174 (28.16%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 7 YGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCL-LCGISGYSSFRGATEGDILDNFVGHAAFTVVKFCVIVHLCFYLPVSFMISRHSFAAMFLKLDVLEMGSISFILLTVVLLGMPFAVVMALFFFQVSEGEAFGYILDVTGALCTGLISLTLPGLIVLKVFWRDHR 525 YG +Q+A + A+ + A + E + T A+G + L G +GY +F + + D++ +F V V+ H+ FY+P F I +A L++++L++ + ++L+TVVL +P V+ + VS F +LD++G L G +PG + LK D R Sbjct: 264 YGTANQNAVWEAYLSTAEESKESF-SYTVWAAAVGGCVLLGSMGCAGYIAFGDSVDSDVMLSFADGILQAVGCAMVVTHIIFYIPNDF-IQMRFYAFRCLQINILQVTTFWYLLITVVLFAIPLTVMACVPEDAVSG--TFSLVLDLSGDLPYGFSCFFVPGAVFLKTIDSDER 433
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Match: UPI0012D4A87B (putative sodium-coupled neutral amino acid transporter 11 isoform X1 n=2 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D4A87B) HSP 1 Score: 53.9 bits (128), Expect = 6.580e-5 Identity = 28/94 (29.79%), Postives = 49/94 (52.13%), Query Frame = 1 Query: 1 MLYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSSFRGATEGDILDNFV-GHAAFTVVKFCVIVHLCFYLPVSFMISR 279 M + S TF + +M T E+W +VT I++ + L GI+GY++FRG ++GD+L+N+ G V+ + + P+ +SR Sbjct: 226 MAFAFMSHHNTFLVYQSMRDATLEKWEQVTHISIGFAWVVAALFGIAGYATFRGLSQGDLLENYCWGDDLMNFVRVLFSISILLTFPIECFVSR 319 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1011.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1011.2.1 >prot_H-akashiwo_Contig1011.2.1 ID=prot_H-akashiwo_Contig1011.2.1|Name=mRNA_H-akashiwo_Contig1011.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=224bp MLYGVNSQSATFFAFNAMAVRTPEQWRKVTSITMAIGASMCLLCGISGYSback to top mRNA from alignment at H-akashiwo_Contig1011:47281..51054- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1011.2.1 ID=mRNA_H-akashiwo_Contig1011.2.1|Name=mRNA_H-akashiwo_Contig1011.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=3774bp|location=Sequence derived from alignment at H-akashiwo_Contig1011:47281..51054- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1011:47281..51054- >mRNA_H-akashiwo_Contig1011.2.1 ID=mRNA_H-akashiwo_Contig1011.2.1|Name=mRNA_H-akashiwo_Contig1011.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=672bp|location=Sequence derived from alignment at H-akashiwo_Contig1011:47281..51054- (Heterosigma akashiwo CCMP452)back to top |