mRNA_H-akashiwo_Contig101.13.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig101.13.1
Unique NamemRNA_H-akashiwo_Contig101.13.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A7S4D873_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D873_HETAK)

HSP 1 Score: 919 bits (2375), Expect = 0.000e+0
Identity = 453/455 (99.56%), Postives = 453/455 (99.56%), Query Frame = 2
Query:   59 MAEGIHIGMDETVHMGQADRQQTQRVVQAPRVGGASLGHGPHSQRQRERQLEEAKLSIRTSERMIRESSTGPKLFRFFGGRTKVTGQKTDAAVQRKWQPQEESKWSIRSWEAATTKIHASIHESIREVEEAVISWWTRLIQIHHVMMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKPHFDSALNKFEHQIHPFVGYGMFFFGITR 1423
            MAEGIHIGMDETVHMGQADRQQTQRVVQAPRVGGASLGHGPHSQRQRERQLEEAKLSIRTSERMIRESSTGPKLFRFFGGRTKVTGQKTDAAVQRKWQPQEESKWSIRSWEAATTKIHASIHESIREVEEAVISWWTRLIQIHHVMMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKPHFDSALNKFEHQIHPFVGYGMFFFGI  
Sbjct:    1 MAEGIHIGMDETVHMGQADRQQTQRVVQAPRVGGASLGHGPHSQRQRERQLEEAKLSIRTSERMIRESSTGPKLFRFFGGRTKVTGQKTDAAVQRKWQPQEESKWSIRSWEAATTKIHASIHESIREVEEAVISWWTRLIQIHHVMMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKPHFDSALNKFEHQIHPFVGYGMFFFGIAN 455          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A2E9LKJ5_9CHLR (Sodium:proton antiporter n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E9LKJ5_9CHLR)

HSP 1 Score: 263 bits (671), Expect = 1.420e-76
Identity = 151/325 (46.46%), Postives = 203/325 (62.46%), Query Frame = 2
Query:  473 LIQIHHV--MMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQ-IKSFCRCNGDGTSGG----KPH-FDSALNKFEHQIHPFVGYGMFFFGITR 1423
            +++ HH+  +   SIPL+VGV+  L+++N+  DL+       Y +     +      +FG   T  FLIN+ FMVFFFG+ATKEIT+++LPGG+LN I KA+ PL  TLGG+ GP  +F     + W    Y G G    T+ NGW + T TDI LA L+A  IFG GHPA+NFLLLLAVADDA+GL IIAVF+PDP HPV+P W+LL+ G    AY MRRV   H W  Y+ +AG +SWVG +K+GI PALALV ++PF+P  P+V  G+     + F   + DG   G    +PH +   L+ FEHQ+   V +G+FFF    
Sbjct:    1 MLRAHHINLLQQYSIPLIVGVIAGLVFANV--DLHA------YEEMVDFHIFGDDTKIFGKAVTVHFLINEIFMVFFFGIATKEITESVLPGGALNPIPKAINPLMGTLGGVFGPAGMFFL---LAWIF--YGGSGDF-GTVANGWGIPTATDIALAWLVARVIFGNGHPAINFLLLLAVADDAIGLGIIAVFYPDPAHPVEPGWLLLVVGGMAAAYAMRRVGVRH-WPIYILIAGGLSWVGLVKSGIEPALALVVIIPFLPG-PSVAHGMFGDGDQEFEHAHPDGLDAGLEALEPHHYQVPLDDFEHQLKLPVDFGLFFFAFAN 309          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A2N0LNV3_9CHLR (Uncharacterized protein n=1 Tax=SAR202 cluster bacterium Io17-Chloro-G6 TaxID=1926615 RepID=A0A2N0LNV3_9CHLR)

HSP 1 Score: 259 bits (661), Expect = 5.150e-75
Identity = 151/331 (45.62%), Postives = 199/331 (60.12%), Query Frame = 2
Query:  506 SIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKS-----------FCRCNGDGTSGGKP-----HFDSALNKFEHQIHPFVGYGMFFFGITRG*TSPTSAT 1450
            SIPL++GV+  L+++N+  D++       Y D     +L     +FG+  T  FLIN+ FMVFFFG+ATKEIT+++LPGG+LN I KA+ PL  TLGGI GP  +F     + W    Y G G    T+ NGW + T TDI LA L+A  IFG GHPAVNFLLLLAVADDA+GL IIAVF+PDP HPV P W+LL+     +AY MRR  ++H W+ YV +AG +SWVG +K+ I PALALV +VPF+P  P  T GL  + +               C+G      K      H  + L++FEHQ+   V +G+FFF       +  S T
Sbjct:   14 SIPLIIGVIAGLVFANV--DIHA------YEDMVDYHILGGGAKIFGNPVTVHFLINEIFMVFFFGIATKEITESVLPGGALNPIPKAINPLMGTLGGIFGPAGLFFL---LAWVF--YGGSGDL-GTVANGWGIPTATDIALAWLVARIIFGAGHPAVNFLLLLAVADDAIGLGIIAVFYPDPQHPVAPAWLLLVVAGMAVAYVMRR-FQVHHWIVYVLIAGGLSWVGLVKSSIEPALALVVIVPFLPG-PKTTHGLFEEDEYEYGTGDPDGSVAVPCDGALVQTPKEELELHHRHAPLDEFEHQLKLPVDFGLFFFAFANAGVAFASIT 328          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A2D5XQ60_9BACT (Sodium:proton antiporter n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XQ60_9BACT)

HSP 1 Score: 259 bits (661), Expect = 6.100e-75
Identity = 144/308 (46.75%), Postives = 191/308 (62.01%), Query Frame = 2
Query:  494 MMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKPHFDSALNKFEHQIHPFVGYGMFFFGI 1417
            + + SIPL+ GV+ AL+ +NL  D Y   FG+ + D   +  LP H  VFGHH    F IN  FMVFFFG+ATKEIT+A LPGGSLN  +KA+ PL ATLGG++GPV VF   + +    G           L  GW + T TDI LA L+A  +FG GHPA+NFLLLLA+ADDA+GL IIAVF+ DP  P +P ++ L+A    LAY +RR   + +W PY+F+AG +SW G +   +H ALALVP+VPF+P+ P+   GL        +  G+ T+       S L  +EHQ   FV +G+FFF +
Sbjct:   12 LQEFSIPLIAGVIAALLAANLAPDWYQYWFGAGHGDGPEVWELPGHLMVFGHHLNLHFFINSVFMVFFFGIATKEITEACLPGGSLNPPRKAVNPLIATLGGVVGPVGVFFLAMTLIGPEGFNAKPSEWNEYL-RGWGIPTATDIALAWLVARAVFGSGHPAINFLLLLAIADDAIGLGIIAVFYGDPEVPARPEFLGLVAAGMALAYVLRR-RSVRAWWPYIFLAGGLSWCGLMMAHLHAALALVPIVPFLPA-PSRDIGLFSSEDEVDKM-GEKTAEDLGLHHSTLENYEHQTKLFVDFGLFFFAL 315          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A2E5HN16_9DELT (Na(+)/H(+) antiporter NhaA n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E5HN16_9DELT)

HSP 1 Score: 259 bits (661), Expect = 1.010e-74
Identity = 148/312 (47.44%), Postives = 194/312 (62.18%), Query Frame = 2
Query:  488 HVMMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKPHFDSALNKFEHQIHPFVGYGMFFFGITR 1423
            ++M + S+PLL GVV++LI +N+ + LY T+   +Y     + L       FGH  T  FLIND FMV FFG+A KEIT+++LPGG LN I+KA+ PL  T+GG++GP   FL VL+       Y G G    T+ NGW + T TDI LA L+A  +FG  HPAVNFLLLLAVADDALGL IIA+F+PDP HPV P W+ L+A A  LA+ MRR + + SW+PYV  AG +SWVG +   +HPAL LVP+VPF+P       G  H +  +     +   G  P     L +FEHQ+   V +G+FFF    
Sbjct:   15 NLMQEFSLPLLAGVVVSLILANMDSHLYHTLV--HYKPLGDVAL-------FGHPLTLHFLINDVFMVLFFGIAAKEITESVLPGGPLNPIRKAVNPLMGTIGGVVGPALCFL-VLSYT----VYSGTGQAD-TVANGWGIPTATDIALAWLVARLVFGATHPAVNFLLLLAVADDALGLGIIAIFYPDPAHPVHPEWLGLVAVAMGLAFAMRR-MGVRSWVPYVVFAGALSWVGLLMASLHPALTLVPIVPFMP-------GPNHDLGLYTEHEDEEQHGHSP-----LEEFEHQLKLPVDFGLFFFAFAN 298          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A7C5KMI5_9BACT (Sodium:proton antiporter n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5KMI5_9BACT)

HSP 1 Score: 258 bits (660), Expect = 1.610e-74
Identity = 149/318 (46.86%), Postives = 196/318 (61.64%), Query Frame = 2
Query:  494 MMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQW--AAGAYE------GDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKPHFDSALNKFEHQIHPFVGYGMFFFGITR 1423
            + + SIPL+VGV  AL+ +NL    Y   FG  + + H   +   H +VFGH     FLIND FMVFFFG+A KEIT+A LPGGSLN I+ A+ PL ATLGG++GPV VF + L +    A G +       GDG     L+ GW + T TDI LA L+A  +FGKGHPA+NFLLLLAVADDA+GL IIAVF+ DP +P  P W+ L+     LA+ MR+ + +  W PY+F+AG +SW G +   +HPALALVP+VPF+P+ P    GL  + +      G+          +AL+ FEHQ   FV +G+FFF    
Sbjct:   12 LQEFSIPLIVGVFAALVAANLAPGWYHHFFGQIHGE-HGDSIWNLHFSVFGHVVGLHFLINDVFMVFFFGIAAKEITEACLPGGSLNPIKSAVNPLLATLGGVMGPVLVFFSALLLVHGIAPGVFPEGSKLWGDGG----LSKGWGIPTATDIALAWLVAKAVFGKGHPAINFLLLLAVADDAIGLGIIAVFYGDPANPANPAWLGLVGVGVALAFAMRK-MGVKDWKPYIFIAGPISWAGLMMAHLHPALALVPIVPFLPA-PKRDTGLFEEAE------GE---------HAALHMFEHQTKLFVDFGLFFFAFAN 307          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A2D5AZV3_9BACT (Sodium:proton antiporter n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AZV3_9BACT)

HSP 1 Score: 256 bits (655), Expect = 3.800e-74
Identity = 143/312 (45.83%), Postives = 193/312 (61.86%), Query Frame = 2
Query:  488 HVMMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKPHFDSALNKFEHQIHPFVGYGMFFFGITR 1423
            +++ + SIPL+ GV++AL+ +NLG + Y  I    Y +       P  G VF H  T  FLIND FMVFFFG+A KEIT+++LPGGSLN I KAL PL +TLGG++GPV VF  VL +    G + G       L NGW + T TDI LA L++  +FG GHPAV+FLLLLAVADDA+GL+IIAV++ DP HP +  W+LL+    +LA F+ R++K+  W PYV +AG ++W G + + +HPALALV +VPF+P       G    +  F    G   + G     + L  FEH +  FV  G+FFF    
Sbjct:   10 NLLQEFSIPLIAGVLVALVHANLGWESYEKIV---YWNPFAELFGPEWGVVFHHETTLHFLINDIFMVFFFGIAAKEITESILPGGSLNPIGKALNPLLSTLGGVVGPVGVFFFVLWVCVKEGLFPG--FEWPVLANGWGIPTATDIALAWLVSRAVFGAGHPAVSFLLLLAVADDAIGLVIIAVWYGDPGHPPELSWLLLVLSGMVLA-FVLRLIKVQKWQPYVLIAGPMAWAGLVLSNLHPALALVFIVPFLP-------GPKRDVGMFLDTEGAVPAPGNHDNHTPLFNFEHDLKTFVDLGLFFFAFAN 308          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A2N0LAB5_9CHLR (Uncharacterized protein n=1 Tax=SAR202 cluster bacterium Io17-Chloro-G4 TaxID=1926613 RepID=A0A2N0LAB5_9CHLR)

HSP 1 Score: 256 bits (655), Expect = 4.500e-74
Identity = 146/314 (46.50%), Postives = 188/314 (59.87%), Query Frame = 2
Query:  488 HVMMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKP--HFDSALNKFEHQIHPFVGYGMFFFGITR 1423
            +++ + SIPL+VGVV  L  +N+ +  Y  +      DAH   +      +FG   T  FLIN+ FMVFFFG+A KEIT+++LPGG+LN I KA+ PL  TLGG+ GP  +F  +  I      + G G   + + NGW + T TDI LA L+A  +FG GHPAVNFLLLLAVADDA+GL IIAVF+PDP HPVQP W+LL  G  + AY MRR   L  W  Y+ +AG +SW+G  K+ I PALALV +VPF+P  P    GL  +           T    P  H  S L+ FEHQ+  FV  G+FFF    
Sbjct:    9 NILQEFSIPLIVGVVAGLAVANIDHHFYEKLV-----DAH---VFGDDVEIFGRSVTAHFLINEIFMVFFFGVAAKEITESVLPGGALNPIPKAINPLMGTLGGVFGPAGLFFLLTYI------FYGGGDNFSEVANGWGIPTATDIALAWLVARMVFGNGHPAVNFLLLLAVADDAIGLGIIAVFYPDPEHPVQPAWLLLTFGGMVAAYGMRRA-NLRFWPAYILIAGGMSWMGLFKSSIEPALALVVIVPFLPG-PQSGHGLFEEEAHHEPTQHRDTMPPSPWHHHHSPLDNFEHQLKLFVDVGLFFFAFAN 306          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A5N9GHV5_9CHLR (Na+/H+ antiporter NhaA (Fragment) n=2 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A5N9GHV5_9CHLR)

HSP 1 Score: 249 bits (636), Expect = 1.790e-72
Identity = 144/344 (41.86%), Postives = 201/344 (58.43%), Query Frame = 2
Query:  473 LIQIHHV--MMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKP----------------HFDSALNKFEHQIHPFVGYGMFFFGITRG*TSPTSAT 1450
            +++ HH+  +   SIPL+VGV+  L+++N+  D++       Y       +   +  +FG   T  FL+N+ FMVFFFG+ATKEIT+++LPGG+LN I KA+ PL  TLGG++GP  +F     + W    + G     +T+ NGW + T TDI LA L+A  +FG  HPAVNFLLLLAVADDA+GL IIA+F+PDP  PV P W+LL+A    +A+ MRR L +  W  Y+ +AG +SWVG +K+ I PALALV +VPF+PS P  T GL  + +        G S   P                H  + L+ FEHQ+   V +G+FFF       +  S T
Sbjct:    1 MLRAHHINILQQFSIPLIVGVIAGLVFANI--DIHA------YEGMVDYHIFGENTKIFGKAVTVHFLVNEIFMVFFFGIATKEITESVLPGGALNPIPKAINPLMGTLGGVIGPAGLFFL---LAWV---FYGGSSDLSTVANGWGIPTATDIALAWLVARIVFGASHPAVNFLLLLAVADDAIGLGIIAIFYPDPEFPVVPAWLLLVAAGMAVAFVMRR-LNVPYWPVYILIAGGLSWVGLVKSSIEPALALVVIVPFLPS-PQTTHGLFEEDEHEFEHTHRGGSEAVPAEVVEAETAEEALELHHRRAPLDHFEHQLKLPVDFGLFFFAFMNAGVAFASIT 328          
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Match: A0A381R599_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381R599_9ZZZZ)

HSP 1 Score: 252 bits (643), Expect = 2.060e-72
Identity = 144/344 (41.86%), Postives = 201/344 (58.43%), Query Frame = 2
Query:  473 LIQIHHV--MMDKSIPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPTFLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILGPVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQIFGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAALLAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQPTVTRGLMHQIKSFCRCNGDGTSGGKP----------------HFDSALNKFEHQIHPFVGYGMFFFGITRG*TSPTSAT 1450
            +++ HH+  +   SIPL++GV+  L+++N+  D++       Y D     +   +  +FG   T  FL+N+ FMVFFFG+ATKEIT+++LPGG+LN I KA+ PL  TLGG+LGP  +F     + W    + G G   +T+  GW + T TDI LA L+A  +FG  HPAVNFLLLLAVADDA+GL IIAVF+PDP +PV P W+LL+     +AY MRRV  +  W  Y+ +AG +SWVG +K+ I PALALV +VPF+P  P  T GL  + ++       G     P                H  + L+ FEHQ+   V +G+FFF       +  S T
Sbjct:    1 MLRAHHISILQQFSIPLIIGVIAGLVFANI--DIHA------YEDMVDFHIFGDNTKIFGKAVTVHFLVNEIFMVFFFGIATKEITESVLPGGALNPIPKAINPLMGTLGGVLGPAGLFFL---LAWI---FYGGGSDLSTVAKGWGIPTATDIALAWLVARVVFGGSHPAVNFLLLLAVADDAIGLGIIAVFYPDPQYPVAPSWLLLVVAGMAVAYVMRRV-HVSQWPVYILIAGGLSWVGLVKSSIEPALALVVIVPFLPG-PRTTHGLFEEDENEFEHAHPGGPQAVPTQAVPAETAQEALELHHHHAPLDHFEHQLKLPVDFGLFFFAFMNAGVAFASIT 328          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig101.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4D873_HETAK0.000e+099.56Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A2E9LKJ5_9CHLR1.420e-7646.46Sodium:proton antiporter n=1 Tax=Dehalococcoidia b... [more]
A0A2N0LNV3_9CHLR5.150e-7545.62Uncharacterized protein n=1 Tax=SAR202 cluster bac... [more]
A0A2D5XQ60_9BACT6.100e-7546.75Sodium:proton antiporter n=2 Tax=Planctomycetes ba... [more]
A0A2E5HN16_9DELT1.010e-7447.44Na(+)/H(+) antiporter NhaA n=1 Tax=Myxococcales ba... [more]
A0A7C5KMI5_9BACT1.610e-7446.86Sodium:proton antiporter n=1 Tax=Planctomycetes ba... [more]
A0A2D5AZV3_9BACT3.800e-7445.83Sodium:proton antiporter n=1 Tax=Planctomycetes ba... [more]
A0A2N0LAB5_9CHLR4.500e-7446.50Uncharacterized protein n=1 Tax=SAR202 cluster bac... [more]
A0A5N9GHV5_9CHLR1.790e-7241.86Na+/H+ antiporter NhaA (Fragment) n=2 Tax=SAR202 c... [more]
A0A381R599_9ZZZZ2.060e-7241.86Uncharacterized protein n=1 Tax=marine metagenome ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig101contigH-akashiwo_Contig101:637130..645581 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1120998.AUFC01000004_gene2387
Preferred namenhaA
PFAMsNa_H_antiport_1
Model size2305
Max annot lvl186801|Clostridia
KEGG koko:K03313
KEGG TC2.A.33.1
Hectar predicted targeting categoryother localisation
Exons13
Evalue3.98e-71
EggNOG OGsCOG3004@1|root,COG3004@2|Bacteria,1TS30@1239|Firmicutes,24AB3@186801|Clostridia,3WDD7@538999|Clostridiales incertae sedis
Description) H( ) antiporter that extrudes sodium in exchange for external protons
Cds size1371
COG categoryP
BRITEko00000,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387049.7189963-UTR-H-akashiwo_Contig101:637129..6371871681387049.7189963-UTR-H-akashiwo_Contig101:637129..637187Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig101 637130..637187 +
1681387049.844479-UTR-H-akashiwo_Contig101:643964..6443021681387049.844479-UTR-H-akashiwo_Contig101:643964..644302Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig101 643965..644302 +
1681387049.8538754-UTR-H-akashiwo_Contig101:644553..6446841681387049.8538754-UTR-H-akashiwo_Contig101:644553..644684Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig101 644554..644684 +
1681387049.8646936-UTR-H-akashiwo_Contig101:645174..6455811681387049.8646936-UTR-H-akashiwo_Contig101:645174..645581Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig101 645175..645581 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387049.7302525-CDS-H-akashiwo_Contig101:637187..6373421681387049.7302525-CDS-H-akashiwo_Contig101:637187..637342Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 637188..637342 +
1681387049.7390442-CDS-H-akashiwo_Contig101:637508..6376551681387049.7390442-CDS-H-akashiwo_Contig101:637508..637655Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 637509..637655 +
1681387049.7481256-CDS-H-akashiwo_Contig101:638122..6385281681387049.7481256-CDS-H-akashiwo_Contig101:638122..638528Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 638123..638528 +
1681387049.7573824-CDS-H-akashiwo_Contig101:638883..6390171681387049.7573824-CDS-H-akashiwo_Contig101:638883..639017Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 638884..639017 +
1681387049.7667325-CDS-H-akashiwo_Contig101:639224..6392791681387049.7667325-CDS-H-akashiwo_Contig101:639224..639279Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 639225..639279 +
1681387049.776215-CDS-H-akashiwo_Contig101:639713..6398101681387049.776215-CDS-H-akashiwo_Contig101:639713..639810Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 639714..639810 +
1681387049.7856698-CDS-H-akashiwo_Contig101:641934..6420111681387049.7856698-CDS-H-akashiwo_Contig101:641934..642011Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 641935..642011 +
1681387049.7954347-CDS-H-akashiwo_Contig101:642730..6428081681387049.7954347-CDS-H-akashiwo_Contig101:642730..642808Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 642731..642808 +
1681387049.8054554-CDS-H-akashiwo_Contig101:643118..6431801681387049.8054554-CDS-H-akashiwo_Contig101:643118..643180Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 643119..643180 +
1681387049.8229773-CDS-H-akashiwo_Contig101:643329..6434571681387049.8229773-CDS-H-akashiwo_Contig101:643329..643457Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 643330..643457 +
1681387049.8348804-CDS-H-akashiwo_Contig101:643932..6439641681387049.8348804-CDS-H-akashiwo_Contig101:643932..643964Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig101 643933..643964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig101.13.1prot_H-akashiwo_Contig101.13.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig101 637188..643964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig101.13.1

>prot_H-akashiwo_Contig101.13.1 ID=prot_H-akashiwo_Contig101.13.1|Name=mRNA_H-akashiwo_Contig101.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=457bp
MAEGIHIGMDETVHMGQADRQQTQRVVQAPRVGGASLGHGPHSQRQRERQ
LEEAKLSIRTSERMIRESSTGPKLFRFFGGRTKVTGQKTDAAVQRKWQPQ
EESKWSIRSWEAATTKIHASIHESIREVEEAVISWWTRLIQIHHVMMDKS
IPLLVGVVLALIWSNLGNDLYGTIFGSYYSDAHPIELLPHHGTVFGHHPT
FLFLINDCFMVFFFGLATKEITDALLPGGSLNSIQKALCPLFATLGGILG
PVFVFLAVLNIQWAAGAYEGDGHTKATLTNGWVVATPTDIPLAALLANQI
FGKGHPAVNFLLLLAVADDALGLLIIAVFFPDPHHPVQPVWVLLIAGAAL
LAYFMRRVLKLHSWLPYVFVAGFVSWVGFIKTGIHPALALVPVVPFIPSQ
PTVTRGLMHQIKSFCRCNGDGTSGGKPHFDSALNKFEHQIHPFVGYGMFF
FGITRG*
back to top

mRNA from alignment at H-akashiwo_Contig101:637130..645581+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig101.13.1 ID=mRNA_H-akashiwo_Contig101.13.1|Name=mRNA_H-akashiwo_Contig101.13.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=8452bp|location=Sequence derived from alignment at H-akashiwo_Contig101:637130..645581+ (Heterosigma akashiwo CCMP452)
TCCATCTTCAGCAAAGAAGTTTGCAGTATACACAGAAAAAAATTGTCGCT GTACAATCATGGCCGAAGGCATCCATATTGGCATGGATGAAACGGTCCAC ATGGGCCAAGCTGATCGCCAACAAACTCAAAGGGTGGTCCAGGCCCCTCG GGTCGGTGGTGCTAGTTTGGGGCATGGACCTCATTCGCAGCGCCAGCGCG AACGCCAACTCGAGTAAGTCTTTTTGGTTTTCTTTTTTTTTCTCCATAAT CTCAATCTTGGTCAAATGCAGTCTCCTTCAAAATTCAGTAAAGCCCAATT GAAACTTCCAATGATGCAGTTGTTACGAATATTTTCTTTATCTACGAAGT GCTGCCACCGTCTTTTTGTTTTGTATCAGGGAAGCAAAACTCTCCATCAG AACAAGCGAAAGAATGATACGAGAATCATCGACTGGACCAAAACTCTTTC GATTTTTTGGCGGGCGAACTAAGGTCACAGGTCAAAAAACGGATGCTGCT GTGCAACGCAAGTGGCAACCTCAAGAGTGAGTATGTGTTTGCTGCTCATA TCCCTCACAAGTTCACAATCCTTTGTTGGTATGTAGCGCCAACAAAAACT GATCAATGAATATGATCGTGGTGCACAATAGCCTCCCAACAGAAGTAAAT AAAAATCCTGCTGATCTGCACAAAGAGCCTGATTTGAACTACCATTATTC AAAACAAAATTCACAACAGCTCACAACCAAAACCCTCAAATCCACACATC AACACAAACAACTTTTTTGCTATACAATTTTTTCTCCTTTGTTGCGAGTG GCTTGTTGCTAAAAGCATCAGAGTGATATATAGAGTAACTGCAGGTCAGC TGTGTGGCCCTGCGGGGCTCGGGCCGTGCAGAGGGGAACACTGACTACAC AACGCAAAACGATGATCATGCAGATATTCTGCTTCTAAACAACAACAGAG CTGCTTCCAATTTTCTTTCATTGATGCTTTTTTGAAAACACAGGGAATCC AAGTGGTCTATCAGGAGCTGGGAAGCAGCAACTACAAAGATCCATGCCTC TATCCATGAATCCATCAGGGAAGTAGAAGAGGCAGTTATAAGTTGGTGGA CCAGATTGATACAAATTCATCACGTGATGATGGACAAATCCATCCCTTTG TTGGTTGGGGTTGTCCTCGCACTCATCTGGTCAAACTTAGGGAATGACCT GTATGGAACGATCTTCGGTTCCTACTACTCAGATGCCCACCCAATTGAAC TCCTACCTCATCATGGGACAGTATTTGGCCACCACCCAACATTTCTTTTC CTGATCAATGATTGTTTCATGGTATTCTTCTTCGGGCTGGCAACAAAGGA AATAACGGATGCACTCCTTCCGGGGGGGAGCCTCAACTCAATTCAGAAGG TAATGGAAAGGGAATCAGCCATTTGTTCTGTTGTACTTCTCCACCTGCTG ATCATTTAAAAATTGTTTTTACTGTTGACCCACCACTTCACAACAACGCT TGTTTGTAGCTTCTTTCAAGGGGTGGGGGGGGGTCAGTGCCACCACCAAC TATTGTAGCATGTTCAACACATGATGATGCTGATGATGATTTTAGTATAT TTCAAGTCCGCCTCTTGGATAACTACAAGGACCGAAGCCCCGGCCTCCAT ATGCGGACCCTTCCACTCCTAGACCCCACATGTGGTGAACATCAAGGCTA AAGTCTGGATTAAAAAAATTACGCACACTGCACTTGCTTCTCCTTCTTCG CCAGGCTCTTTGCCCACTCTTTGCAACCTTGGGTGGGATTCTCGGCCCAG TTTTTGTTTTCCTTGCCGTCTTGAACATTCAATGGGCTGCCGGGGCGTAC GAAGGCGACGGACATACCAAGGCTACCCTGACGAATGGGTGAGCCGGCGC ACCGCTGCGCTGTGTGCGTGCACCTGTTTGTTGCCGCCTCGAACGCCTCT CTGATCCATGCGCTGCTGTTGAGCGTAGATTATACCCACACAAAGGTCAG GAGATAGACCGCACAGATAGAGAGAGAGAGAGAGAGAGATAGAGAGAGAG CTCTTCCCACTGTGCGTGCGACTGCGCCCTGCTCGCTccCCCCAGGTGGG TGGTGGCCACGCCGACCGACATCCCTCTGGCGGCGCTGCTGGCCAATCAG GTAGAGGGGGCCGCGCCGCCCGCCGCCCAGGCCGCCGCCCGCCGCGCCGC GCCCGCCCCGCGGCCGCACTGGAGATGGAGTGGGGATGTGTGGCTGCACT GGAGATGGAGTGGGGATGGAAGACGGGCGGCGGGGGGGCGCGCCCTCCGC GTTGGTGCTGCGATGGGGTCGGTGCCACGGCCCGCCGGACAAAGACCGCG TGGGGGGTGTTTTTTTGTTTCCTGTGGGCCTTCTACATGGCACCGCAAAT GCTGTTCAGCTTGACGTGCCTTCGTTGAACTCACATATTATTATGAGAAT CAATATAGCACAGCTCTATGCAGCAAAACGATTAAACTAACTGCTCCTAT AAAATCTTGGTTGCTATATACACGAACTCTACCTGAAAGCCTCTACCTGA AAGCCTCATGCCTTGTCATACCTTCCTGTTCCAGATATTTGGGAAAGGCC ATCCAGCGGTGAACTTTTTGCTTTTGCTCGCTGTGGCTGATGATGCTCTT GGTCTCTTGATCATTGCTGTCTTTTTCCCTGGTGAGGTTGTTGTAATCTC TAATCTCATGCACCAACAGTAAAAAAAAATCTTCAGTGTTATATTATATA TTTATATACATATCACCGGTGATATGTTAAGCAAAACTCCCACTTCTTTT CAGAATTGTTAGAAGCAAATTTGGGGAAATACTAGAATGATCATAGAGGT CCCGGTCTATAGACCGCAGGCCGGGGGATTCACCTCTGCCCACAATACGG GGCAGGGGAGCGGTGTTTGTTTGGTTGGCAGTGCCTACCGTGTCAAACAT GCACAGGGTTCTAGGGTCGGCCAGGGTAAGCTGCCGGTACGACGCTCAGG AGAGGGAGTGCCCTAGTCTGCAGGTTTGCGCATTTGAGCATTGGCAGCCG ATCAACACTATGCAGTTGCACTGGGTTCTTGGGAACACAAGTGCGACATG CCACAATGGCTTGCTGCAGACGAGTGGGAGTTGGGGGAGGGGGGAGGGGC TAGCCATATCAGCATGGACTGTTCTTGGGTGGCTTTGTCTGTGGCAGCAA CGATCCGGTGTGGCGGATATCAGGGCCTGTGGGGGGCCTTGAATGGAAGA ACCATCGTGCTGCTGGCAGAGTTCGAGGGCTGTATCTTCCTGGTTTTCCT AGTTTTGGAGCTGTCACAACGACGCCAGGGACGGTCAGTGCTGGGGAACG CACTGAACGCAAGCGCAGGGGCAAAAGCTTGTCGAAGGCTGCCAAAGGAT GGAGCTGGGTCGAAGAAGGGCTTCTTCAGAGAGGCGAGCTGAACAACGGC GTCCTTCTGCTGCTGCTGCTGAGGCCGAGGCTGCTGGTGCTGCTGCTGGC GAGCAGAACCAGCAGCATCAGCGGCAAGACGAAGGCAGGGAGGCACAGAG CAGTGGGCGGCAGCACAACAACAACGGGGAGGGGCATGGGGGGGAGGGGG CGGAGATAGAGCAACCAGATGGGCCTCGGAGGGGGGAAGAAAATCCAGAA TGTTCGGGTCTGCTGGGGCAAGGCCGGCCAATCATCATCCACAATTTGGG GTTTAGTGGGGAAGAGGGAAGAGGGAAAGCGGGAGGAATGGCAGCCGCCA CCGATTGGGGGGACTGAGAGCCGGGAAAAAAATCAGGGAATATCCAGGGA AAGCAACAGACTGGAGGCGGGCGATTCCCCAATGAGAATGGTAGGCGGAT CTGGGAAGAATAATAGGGGGGAGGGGGAAGAATCACTAGCAGCTGCGGCT GAACGGGGATAAATCGCTCAGACGGTCAGCGAGTTGGTTGTGGAGGAGCT GCTTGATGAGCTGCAAATGTGCGATGAGGGGAACTCGAGGACACAGGGAA TGGAGGGGCTTCTTGTCCttCGTTGTGGTCATTGGACTCATCGAGCAGTG GGGATGAAACGGGATCTAGCTCTAAGGAAGAGCCAGAAGGGAAGTGCAGC GTCACGGTCCCTGAAAGAAGGAGCGAGTGGGCGATTAATGGAGCCCAGGA AGTGAAAGGTGAAGAGGGCTTCAAGCTGGTTGAAGCGAGAGCGAGCAAGC GGCTTGCAAAGCATGAGCGCCAAAGAGAAACAGAACGGGAAAGGGTATAG aGCGAGAAACAAAGGCGAAGGAAGAGGACAAACGGGACTGTCTGCTTCAG CGCCAAGTACTGGCTAAGGCAGCACAGGAGCGCCGGGATGAAGAGGCCAG GAGGGCAGCTGAAGGGGCTAGAGGCAGCTTGGGGGCCATGGGAGGGCTGG TGGAGCCGTGCGAGGGGGTAGGGGTAGATTGGCTGGGGGAAGAGGGGGAC AGCGGGGCCCTGGGAGAGCGACTCCTGGAAGTGGAGGAGCTGGGAGACGG AGGGGTGCTGCTGGACGAAGTCTTCTCTTGGAGGCCACCCTCTGGCCAGT TTTTGAGGGGCCAAGCACCCGCCTGAAGGCAGGTCTCTGCAGGAGCACAG AACTATCTAACGGGCCGACCCAACGGACAGCAACCCCCCCCCCCGGCCCC GCCCCGCGTCGCCTCGCCCTCGTCATCCAgcGCGACCACATGTGGACCCG ACGCCGCTTCCTCCCTCCCCCCAGCGCCCGCCCACATGCCCACCCCACCC ACCCACCCACCCAGCCCCCCTTCCCCTGCCCCCGGGCCCCAGGCCCCGCC GGCAGACCCGCACCACCCGGTGCAGCCGGTGTGGGTCCTGCTGATCGCGG GCGCGGCCCTGCTGGCCTACTTCATGCGGCGGGTGAGTGAGGCCGGGCGG GCGGGGCCCGGGAAAACAACTCCACTCCTTCTCTCGGCAGTTCACATTCA ACGCACAAATAATTGAACACAACAAGAAGAGTAGTTTAAAAAAAAAGGGG CTGGTGCATCCAGGTGATCAACCTGTTTCCGATGTTTCGGTACCTGGGGG GTGCAGCAGCGATGTTGTCCCGCCAGAAGAACAATCCCGTGACCGCGTTT GTTTTTACTGGATCTGATGTTTGCGCCAGCCCGGCTGCGTAGGTTTGCAG CCTATACATCATGCCAGCACCAGTTTTTTTAGCCTCAGAGCCCGAGGAAC ATTTTGGCTATACATCTATAATACATATACCTGCAGTAAAACTATAATTG AAGCTTTAAAAAGCAACGCATTGTACCAAGAGTGGTAGTCTGACACCCGG GATCAATTATTTTGACCCCCAAAAATATAAATACATAAATAAAAAATGAT TGAAAAATTAAAAGGGCTGTGCATGTAGTTATAATGTTTTTGAGTAAATC TCTGAGTCAACTCACTCACCCGCGCAGCCGCCTGTGTTTTTCCAAAAAAT ATGTAGCCACAAACTGAGTTACACTTTGAGTTAAACTCACTTACCCGCGC AGCCGCCTTTATTTTTCTAAAAAATCAGTAGTCACAAAAAATCGCACCCA CTGGTCTGGTATAATGTATACCCCACCTGTGTGATCAAATGTAATACACA GGTGCTGAAGCTGCATTCGTGGCTGCCATACGTGTTTGTGGCAGGCTTTG TCTCCTGGGTTGGCTTCATAAAAACAGGGGTGAGTAGCACGGCGCGTTCA AGCAAAGGGGGCAGTGGCAGCAAAAAAGTACTTCTATCGCATATAAATCT TGTTGTCTTCCTTTGTATATCGTGCTTTACAGACAGCAGCAGGGTTGTTA TTTGTGCATAGTGTTGTTTGACCACACCTGGTGTTTGTGACACTTAACTA TAAAACCTAAATCATGTCGTACTGGATGATCAACACAAAAAGAATGAATA TAAAAATGAATGAAATGTGGGTATAATGTTGCTTGCTTTGAAATTTTTCT TATTTTTTCAATCTTTCGTTCACAACTTGAAAAAATCAGATCCACCCAGC CCTTGCCTTGGTTCCTGTGGTTCCGTTTATTCCATCACAGCCAACAGTCA CGTAAGTCGACTCAAAACAGATGACGGTGGCATTTAAACCATAGCTCTGT TCGTAGAATCCTGTGTTGTTGCTTGTCATCAACACAGTGAATTTCATTTT TGCTTCTTTCCCCCCTCACACCATCCAAAAAAAATCTTTGTGCTTTGCAG CCGGGGTTTAATGCACCAAATCAAAAGTTTTTGCCGGTGTAATGGTGATG GAACTAGTGGTGGAAAGCCACATTTTGATTCTGCTTTAAACAAGTTTGAG CACCAGATTCATCCTTTTGTTGGCTATGGTGAGCAAAGATCAAACAGTTT GCATGTGTGTCTCTTTTTGTGTTTTGTGTGGCGGGGGGGGGCTATACGCT CATTGGTGTACTGGTcCCTCTATATATACCATATTTTATCACTATATGAT GGTAGTATCTGGTTTAGAGCTaAAAAAAATAAGTGCCCCCCCCCTCAGCC ACAATACTCAGTGGACTCTGCCCCTCCCCAACTTGCCAACGTATAATTTC AAATGGATATATAAACACACATATCATCATAAGTAGTACTTAGATGATGA TATGTGTAAGTATGGTAATGTAACCAGTACTTTTTTTTAACATTTCACGA TCCCTTTGATATGGTGTAGGCGTGGTGATGCATACCATGCATGACATGAC ACAATGCAAGTGTGTTTGGGTCGGCGTCTTCCCACGTCGGGCCCCGCCGT TTCCGCCGCCGAGCAACCACCACCTAACGTTATCACATATGTGCTTCCCC CAGGGATGTTCTTCTTCGGGATAACGCGGGGGTGAACCTCACCAACATCG GCCACATGACCGGCGCCGTGGTGGTCGGCCTGGTGCTGGGCAAGCCCCTG GGCATCCTGCTGGCCACCCTGGCGGCCACCAAGCTGGGCAAGCTGGACCA CGGGCTGGCGACCAAGGACCTGGTGATGATGAGCTGCCTGGCGGGGCTGG CCCTGACCGTCTCGCTCTTCATGGCCGGGCTGGCCTTCAGCGACCACCCG CAGCTGCAGGAGCAGGCCAAGCTGGGCGCGCTGCTGGCCTCGGTGGTGGT GGCGGCCGTGTGCTACGGCGTCTCCAGGGTGTGGGACCGATTACAACGCC ACCCCACGAGCGAGATCGTCAAGGTCTTGTGCATCCCCGCCGCCCTTGTG ACGCAAGAACGCCGACCAACCACGGAACATTTTACGTTCTTTCTGTCCGG AGTCGTCCGTTATATCTCTGCGGAGTAGGCGACGTCGCTCATGCACCGCC GTCGCAGTTTTTCCCGCCCCGCTGCCATGCCCTCTTTTTGGTCCCCAGGC TCTTTTTCTCTGAGGCGGCATGTCAACGTGCGCATCGCCCCGCCCCGCCC CGCCACGCCCTTTTTGGTCTCCAGGACCAGCCCGTCGCCCACCCGAGCGT CACCCTCCCGAAGCTGGCGCGCAGTGGCACCGTGCCCAACGACCTTAGCA CCATAGAGGAGGGCCGCGCGCTGGGGGAAGACGGCGCGGACGACAGCGGA GGAAGGTGCTGGGGGTTGGGTGGGGTGGGGTGGTTCAGACCCTCCTGCCT CCCTTTGCTGCATGCGCCAAATTGCATCTGAACAGCTTGTCAGTTGGCTG AACAGCTGGCGGCTGCCCCGCGCAACTTGTATTGCCCTTTGGCCTCATCC CTGCCTCTCCGATGCGTCTTGTGGGACTCCTCTGCCAGCATCGCACAACC CTTGAAAAGTGTCTCGATTCGAGGGTTCCACAGGGCAGTGTTGCCTCTCC TTGCGAAGTACCTGGCGCTCTTCTCCACGCCTTACACGACTTGACAACCC TTGGTGAGTGCCTCCGTCTCCTATGTTTCAAGACGAGTCCAATGCACACC GCCAATCCACCTCTCGTCGCAAAGCGCCGCGCCGCGCGCCCTTCCTCTCC TGCCTTTTACCCTTTGTTCCGCTGCATGGTCCATGCAACATGAGCCCCGA TGGCACCCACCCACCCACCTGTACCCCTTGCCCTCGCCCCCCCAGCGACC CGGCTGCCGGGGAGGACCCGGAGGACTACATCCTGGACGCGCCCCCGGTC TCCTCGCCGGGGGGGGGCGCCGCCGCTGCCGCCATGGCGAACTAATAGCA GCCCGGCCCCGCCGCCGCGGCCCCGAGGGGGGGGGGGGCTGGTGCTGGTT TGTTGTGCAGAGGTTCTGGGGCAGCAACGGCGAACGCGCCGTGCGCCACT GTGATACTACGGACCAACCAACCCAGACCCAGCTTGCTTCAAACAACAGG CAAAGAAGTGACTTGAAGTGGAAGTGGGCAACTAAAAACCTTTTCTTTTT CGCCGATGATGACGAGTTCAAATCGGCAGAAATGATGGAGAAATGTATAC TACTACAGGCGGTTGAGTTTGGTGGCAAGTGTATATAGTGCATTTTGTTG TT
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig101:637130..645581+

>mRNA_H-akashiwo_Contig101.13.1 ID=mRNA_H-akashiwo_Contig101.13.1|Name=mRNA_H-akashiwo_Contig101.13.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1371bp|location=Sequence derived from alignment at H-akashiwo_Contig101:637130..645581+ (Heterosigma akashiwo CCMP452)
ATGGCCGAAGGCATCCATATTGGCATGGATGAAACGGTCCACATGGGCCA
AGCTGATCGCCAACAAACTCAAAGGGTGGTCCAGGCCCCTCGGGTCGGTG
GTGCTAGTTTGGGGCATGGACCTCATTCGCAGCGCCAGCGCGAACGCCAA
CTCGAGGAAGCAAAACTCTCCATCAGAACAAGCGAAAGAATGATACGAGA
ATCATCGACTGGACCAAAACTCTTTCGATTTTTTGGCGGGCGAACTAAGG
TCACAGGTCAAAAAACGGATGCTGCTGTGCAACGCAAGTGGCAACCTCAA
GAGGAATCCAAGTGGTCTATCAGGAGCTGGGAAGCAGCAACTACAAAGAT
CCATGCCTCTATCCATGAATCCATCAGGGAAGTAGAAGAGGCAGTTATAA
GTTGGTGGACCAGATTGATACAAATTCATCACGTGATGATGGACAAATCC
ATCCCTTTGTTGGTTGGGGTTGTCCTCGCACTCATCTGGTCAAACTTAGG
GAATGACCTGTATGGAACGATCTTCGGTTCCTACTACTCAGATGCCCACC
CAATTGAACTCCTACCTCATCATGGGACAGTATTTGGCCACCACCCAACA
TTTCTTTTCCTGATCAATGATTGTTTCATGGTATTCTTCTTCGGGCTGGC
AACAAAGGAAATAACGGATGCACTCCTTCCGGGGGGGAGCCTCAACTCAA
TTCAGAAGGCTCTTTGCCCACTCTTTGCAACCTTGGGTGGGATTCTCGGC
CCAGTTTTTGTTTTCCTTGCCGTCTTGAACATTCAATGGGCTGCCGGGGC
GTACGAAGGCGACGGACATACCAAGGCTACCCTGACGAATGGGTGGGTGG
TGGCCACGCCGACCGACATCCCTCTGGCGGCGCTGCTGGCCAATCAGATA
TTTGGGAAAGGCCATCCAGCGGTGAACTTTTTGCTTTTGCTCGCTGTGGC
TGATGATGCTCTTGGTCTCTTGATCATTGCTGTCTTTTTCCCTGACCCGC
ACCACCCGGTGCAGCCGGTGTGGGTCCTGCTGATCGCGGGCGCGGCCCTG
CTGGCCTACTTCATGCGGCGGGTGCTGAAGCTGCATTCGTGGCTGCCATA
CGTGTTTGTGGCAGGCTTTGTCTCCTGGGTTGGCTTCATAAAAACAGGGA
TCCACCCAGCCCTTGCCTTGGTTCCTGTGGTTCCGTTTATTCCATCACAG
CCAACAGTCACCCGGGGTTTAATGCACCAAATCAAAAGTTTTTGCCGGTG
TAATGGTGATGGAACTAGTGGTGGAAAGCCACATTTTGATTCTGCTTTAA
ACAAGTTTGAGCACCAGATTCATCCTTTTGTTGGCTATGGGATGTTCTTC
TTCGGGATAACGCGGGGGTGA
back to top