mRNA_H-akashiwo_Contig1003.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 330 bits (846), Expect = 9.350e-109 Identity = 156/218 (71.56%), Postives = 183/218 (83.94%), Query Frame = 1 Query: 1 FALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRF 654 FALCFLDDVLCYS ++F HL HL +IF+R++ ANLK KLPKC FGA Q+PFLGH+ASREGLKPDPKKIEAVR+LRRP SKKQVR LLGLASYYRQFVP FAS+A+PLY+L K + P+ + W DDCEW+FQ +KDSLTSAP L +P W K ++ETDAS TGLGA+LLQ+T G +PIAYASR CSP E NYSATE+ECLGVI+AL+ FRCYV+G F Sbjct: 245 FALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTK-DKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREF 461
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 330 bits (846), Expect = 1.640e-106 Identity = 156/218 (71.56%), Postives = 183/218 (83.94%), Query Frame = 1 Query: 1 FALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRF 654 FALCFLDDVLCYS ++F HL HL +IF+R++ ANLK KLPKC FGA Q+PFLGH+ASREGLKPDPKKIEAVR+LRRP SKKQVR LLGLASYYRQFVP FAS+A+PLY+L K + P+ + W DDCEW+FQ +KDSLTSAP L +P W K ++ETDAS TGLGA+LLQ+T G +PIAYASR CSP E NYSATE+ECLGVI+AL+ FRCYV+G F Sbjct: 245 FALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTK-DKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREF 461
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 314 bits (804), Expect = 8.000e-105 Identity = 148/217 (68.20%), Postives = 181/217 (83.41%), Query Frame = 1 Query: 1 FALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSR 651 FALCFLDDVLCY+G DF+ HL LEEIF R+ ANLK KLPKC FGA Q+PFLGHIA+REGLKPDPKKIEA+++L+RP +KKQVR +LGLASYYRQFVP FA+ A+PLY L KKE P+ ++WTDDCEW+FQ LKD+LT+AP L FP+++K IETDAS GLGA+L Q+T GR+P+AYASR C+ E NYSATE+ECLGVIF ++ FRCY++G + Sbjct: 107 FALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQFVPNFAATAAPLYTLTKKE-PKGVEWTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDTTEGRKPVAYASRVCNSAEANYSATELECLGVIFGIQQFRCYILGRQ 322
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: A0A015J1N0_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J1N0_RHIIW) HSP 1 Score: 224 bits (572), Expect = 1.460e-68 Identity = 108/218 (49.54%), Postives = 157/218 (72.02%), Query Frame = 1 Query: 1 FALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRF 654 F L +LDDV+ YS K F H++HLEE+ R++ ANL+LK KC+F A +L FLGH+ +EG+KPDP+K+ + P + +++R +LGL SYYR+F+ FA +A P+Y+LLKK+AP +WT+ + +F+ L+D LT+AP + +PD+SK + TDAS+ GLGAVL Q+TD IAYASR+ P EKNY+ TE+ECL +++A+K FR Y+ GS+F Sbjct: 126 FVLVYLDDVIIYS-KTFKDHIQHLEEVLNRIRKANLRLKAEKCYFAAAELQFLGHVVGKEGVKPDPEKVNKMVNYPEPQNIRELRGVLGLFSYYRRFIKDFAKVADPMYKLLKKDAP--YEWTNLQQKAFENLRDKLTTAPIVQYPDFSKPFFLYTDASTIGLGAVLAQKTDDQEHVIAYASRTLIPAEKNYAITELECLAIVWAVKYFRHYLYGSKF 340
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: A0A7D9J4G8_PARCT (Retrovirus-related Pol poly from transposon 412 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J4G8_PARCT) HSP 1 Score: 218 bits (555), Expect = 8.500e-62 Identity = 109/219 (49.77%), Postives = 148/219 (67.58%), Query Frame = 1 Query: 4 ALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQP-IAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFK 657 LC+LDDV+ + G+DFN+H L+ + RL+ NL++KL KC A Q+ FLGH+ + G+ PDP KIEAV + P + K +RS LGLA YYR+F+PGF+S+A PL QL +K A WTD CE +FQ LK L SAP LA+PD+S+ +++TDAS G+GAVL Q +LG + IAYAS++ SP+E+ YS TE E V+F FR Y++G FK Sbjct: 455 CLCYLDDVIVF-GRDFNEHYNRLKTVLERLRSHNLRVKLAKCTIAAPQVAFLGHVVTESGIMPDPAKIEAVNNITSPRNIKDIRSFLGLAGYYRKFIPGFSSIAMPLLQLTQKAAQ--FNWTDACEQAFQRLKHLLCSAPILAYPDFSQAFILQTDASDYGVGAVLSQLDELGNEKVIAYASKALSPREQKYSTTEKEAFAVVFGTAHFRVYLLGRHFK 670
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: A0A015KU97_RHIIW (Gag-pol fusion protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015KU97_RHIIW) HSP 1 Score: 204 bits (520), Expect = 5.630e-61 Identity = 110/220 (50.00%), Postives = 148/220 (67.27%), Query Frame = 1 Query: 1 FALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQ-ETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFK 657 F + +LD+V+ YS F QHLEHL IF RL+ A LKL KC F ++L FLGHI S +G++ DP KI+ V+ P + Q+R LGLASYYR+FVPGF+ +A+PL +LLKK W + + +F+ LK +L ++P L FPD+ K V+ TDAS+ GLGA+L Q + D + IAYASR+C+ E NYSATE+ECL VI+A+K F Y+ G RFK Sbjct: 126 FVMVYLDNVIIYSDT-FEQHLEHLRVIFDRLEDAGLKLNPDKCSFVKEELEFLGHIVSNKGIRTDPAKIQKVKDFPVPLNVTQLRGFLGLASYYRRFVPGFSRIATPLNKLLKKGV--AYSWGKEQQVAFEQLKQTLIASPILIFPDFEKQFVLLTDASTFGLGAILSQLDEDGNDRVIAYASRTCNKAESNYSATELECLAVIWAVKHFHAYIYGQRFK 342
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: A0A7D9J5B6_PARCT (Transposon Ty3-G Gag-Pol poly (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J5B6_PARCT) HSP 1 Score: 209 bits (533), Expect = 9.830e-60 Identity = 107/219 (48.86%), Postives = 145/219 (66.21%), Query Frame = 1 Query: 4 ALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQP-IAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFK 657 LC+LDDV+ + G+DFN+H L+ + RL+ NL++KL KC A Q+ FLGH+ + G+ PDP KIEAV + P + K +RS LGLA YYR+F+PGF+S+A L QL K A WTD E +FQ LK L SAP LA+PD+S+ +++TDAS G+GAVL Q +LG + IAYAS++ SP+E+ YS TE E V+F FR Y++G FK Sbjct: 260 CLCYLDDVIVF-GRDFNEHCNRLKTVLERLRSHNLRVKLAKCTIAAPQVAFLGHVVTESGIMPDPAKIEAVNNITSPRNIKDIRSFLGLAGYYRKFIPGFSSIAMSLLQLTHKAAQ--FNWTDAYEQAFQRLKHLLCSAPILAYPDFSQAFILQTDASDYGVGAVLSQLDELGNEKVIAYASKALSPREQKYSTTEKEAFAVVFGKAHFRVYLLGRHFK 475
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: UPI001C177570 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C177570) HSP 1 Score: 208 bits (529), Expect = 2.760e-59 Identity = 102/209 (48.80%), Postives = 147/209 (70.33%), Query Frame = 1 Query: 1 FALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTF 627 F L +LDDV+ YS K F H++HLEE+ R++ ANL+LK KC F A +L FLGH+ +EG+KPDP+K+ + P + +++R +LGL SYYR+F+ FA +A P+Y+LLKK+AP +WT+ + +F+ L+D LT+AP + +PD+SK + TDAS+ GLGAVL Q+ D IAYASR+ P EKNY+ TE+ECL + +A+K F Sbjct: 563 FVLVYLDDVIIYS-KTFKDHIQHLEEVLNRIRKANLRLKAEKCHFAAAELQFLGHVVGKEGVKPDPEKVNKMVNYPEPQNIRELRGVLGLFSYYRRFIKDFAKVADPMYKLLKKDAP--YEWTNLQQKAFKNLRDKLTTAPIVQYPDFSKPFFLYTDASTIGLGAVLAQKIDDQEHVIAYASRTLIPAEKNYAITELECLAIAWAVKYF 768
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: UPI001C1367D2 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1367D2) HSP 1 Score: 197 bits (501), Expect = 9.490e-59 Identity = 101/220 (45.91%), Postives = 148/220 (67.27%), Query Frame = 1 Query: 1 FALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPI-AYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFK 657 F + +LDD+ YS + F++HL+HL +IF RL+ A LKL KC F + +L FLGH+ S++G++ DP KI V+ RP + Q+R LGLASYYR+F+ F+ +A+PL +LLKK P WT+ + +F+ LK+ L S+P L +P W++ ++ TDAS+ LGAVL Q+ + G + + AYASRS P EKNY+ATE+ECL ++A+ F Y+ GS F Sbjct: 73 FVVVYLDDLNIYS-RTFDEHLQHLRKIFDRLRDAGLKLNPEKCKFASTELAFLGHVISKDGIRTDPGKISKVKDFPRPTNLTQLRGFLGLASYYRRFIKDFSKIANPLNKLLKKNVP--FNWTNAQQQAFEYLKNCLISSPILTYPQWNRPFILFTDASTFALGAVLSQKDEDGNERVVAYASRSLLPAEKNYTATELECLAAVWAIGKFHHYLHGSHFS 289
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Match: A0A2Z6RUC4_9GLOM (Pro-Pol polyprotein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RUC4_9GLOM) HSP 1 Score: 209 bits (531), Expect = 1.430e-58 Identity = 107/218 (49.08%), Postives = 149/218 (68.35%), Query Frame = 1 Query: 4 ALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLG-RQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRF 654 + +LDDV YS K F +HL+HLEE+ +R++ A LK+ KC F L FLGHI + +G+ PDP K++A++ P + Q+R+ LGLASYYR+F+ F+ +++PLY LLKK+ P +W D FQ LK+ L +AP LA+PD++K ++ TDAS T LGAVL QE + G R PIAYASRS S E+NYS+TE+EC VI+A+ FR Y+ G +F Sbjct: 563 TMVYLDDVNIYS-KTFEEHLQHLEEVLKRVEKAGLKINPEKCHFCTQSLQFLGHIVTNKGILPDPSKVDAIKNYPVPKNLTQLRAFLGLASYYRRFIKDFSKISTPLYMLLKKDIP--YEWNQDRHQVFQFLKEKLITAPLLAYPDFTKSFLLFTDASITALGAVLEQEQEDGLRHPIAYASRSTSESERNYSSTELECAAVIWAVNYFRPYLYGKKF 777 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1003.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1003.1.1 >prot_H-akashiwo_Contig1003.1.1 ID=prot_H-akashiwo_Contig1003.1.1|Name=mRNA_H-akashiwo_Contig1003.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=219bp FALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLback to top mRNA from alignment at H-akashiwo_Contig1003:3230..3886- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1003.1.1 ID=mRNA_H-akashiwo_Contig1003.1.1|Name=mRNA_H-akashiwo_Contig1003.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=657bp|location=Sequence derived from alignment at H-akashiwo_Contig1003:3230..3886- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1003:3230..3886- >mRNA_H-akashiwo_Contig1003.1.1 ID=mRNA_H-akashiwo_Contig1003.1.1|Name=mRNA_H-akashiwo_Contig1003.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=657bp|location=Sequence derived from alignment at H-akashiwo_Contig1003:3230..3886- (Heterosigma akashiwo CCMP452)back to top |