mRNA_H-akashiwo_Contig100.35.2 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig100.35.2
Unique NamemRNA_H-akashiwo_Contig100.35.2
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A7S3XU58_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU58_HETAK)

HSP 1 Score: 400 bits (1027), Expect = 5.860e-137
Identity = 207/216 (95.83%), Postives = 207/216 (95.83%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVGEG 649
            ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTG         NGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVGEG
Sbjct:  188 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTG---------NGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVGEG 394
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A7S3XU83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU83_HETAK)

HSP 1 Score: 400 bits (1027), Expect = 4.800e-135
Identity = 207/216 (95.83%), Postives = 207/216 (95.83%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVGEG 649
            ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTG         NGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVGEG
Sbjct:  323 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTG---------NGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVGEG 529
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A7S1GQR4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQR4_CYCTE)

HSP 1 Score: 205 bits (522), Expect = 9.520e-63
Identity = 109/212 (51.42%), Postives = 149/212 (70.28%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAE--FEEGGGEV-IARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKAL 628
            I+VR VN P ++L+K  AY+ D+ AL VIT  LS+ GLPWMC ATVQS+ HV++M E  F E  G++ I    ETR TG  +HG IAA+L LLP++  +P+PV+SG+FLFLGR++M+G         N FL RL+  +AE+ +LPE HP+R  GR  A  +T++Q ACL GLWA K N +TA++FPSVIG+LM IR ++LP +F++ EL  L
Sbjct:   23 ISVRVVNNPENKLKKGAAYNLDMVALGVITFALSIVGLPWMCGATVQSMNHVKAMTETKFNEQTGDLEIVDVTETRTTGFVMHGMIAATLGLLPLLRSVPIPVVSGVFLFLGRKLMSG---------NSFLQRLRDTFAERTRLPEGHPIRTIGRKRAGLFTSIQLACLCGLWAFKQNTSTAIFFPSVIGMLMLIRAFMLPKIFTKRELFEL 225
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A7S2YS88_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YS88_9STRA)

HSP 1 Score: 201 bits (512), Expect = 5.070e-61
Identity = 111/218 (50.92%), Postives = 144/218 (66.06%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEF---EEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVGE 646
            I+VR VN   + L+KPVAY+ D+ AL ++TLGLS  GLPWMC ATVQSL HVR+M E    EE G   +A+  ETRLTG  VH  I  +L LLPV++ +P+PV+SG+F+FLG ++M+G         N FL R+  V+ EK +L   HP+   GR  +  +TA+Q ACL GLWA K N  TA++FPSVIG LM IR +ILP  F+E+EL AL     E
Sbjct:   37 ISVRVVNKEENNLKKPVAYNLDMVALGLVTLGLSFAGLPWMCGATVQSLNHVRAMTELRYNEETGEPEVAKVTETRLTGFMVHFLIFCTLGLLPVLSFVPIPVVSGVFMFLGCKLMSG---------NTFLERILEVFVEKRRLNPGHPILQIGRAKSAAFTALQIACLSGLWAFKQNNNTAIFFPSVIGFLMIIRTFILPKFFTEKELTALGDPTPE 245
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A1Z9L625_9SYNE (Uncharacterized protein n=1 Tax=Synechococcus sp. TMED187 TaxID=1986595 RepID=A0A1Z9L625_9SYNE)

HSP 1 Score: 207 bits (526), Expect = 1.510e-59
Identity = 111/218 (50.92%), Postives = 151/218 (69.27%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKL----PEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVG 643
            ITVRTVN+P + L+K  AYH DL  L ++T G S+ GLPWMC+ATVQSL HVR+M+   +G  EV+    ETR+TG  VH  I AS L+LP  + +P+PVISG+FL+LG+++M         +GN FL R K+VW ++ +L     ++  +   GRGA  R+TA+QA CL  LWALK+NPATAL FPSVIGVLM +R  +LP +F+ +EL+ LD+ +G
Sbjct:  364 ITVRTVNSPSNNLKKGAAYHLDLATLGLLTGGASVVGLPWMCSATVQSLNHVRAMSLGSDGT-EVV----ETRVTGFGVHAAILASALILPSFSAVPLPVISGVFLYLGQKVM---------KGNQFLQRCKTVWLDEDRLNIDCQDERQMVVLGRGAVARFTAIQALCLAALWALKLNPATALIFPSVIGVLMVLRAKVLPKIFTTQELRLLDTRIG 567
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A7S4AXV5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4AXV5_CHRCT)

HSP 1 Score: 196 bits (497), Expect = 7.800e-57
Identity = 109/227 (48.02%), Postives = 147/227 (64.76%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEE--------GGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKLPE-----DHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVG 643
            ITVRTVN+P ++LRK  AYH DL AL+++T   S+ GLPWMC+ATV+SL H+R+M+ F++           EV  R  E RLTG  VH  I  S L +P++A +P+PV+SG+FL+LGR++M G         N FL R K +W ++A L       +  + A GR +  R+TA Q  CL GLWAL+ NP+TAL FPSVIGVLM IR+ ++P LFS  EL  LD+ +G
Sbjct:  184 ITVRTVNSPENKLRKGPAYHLDLLALSLLTGATSVTGLPWMCSATVESLNHIRAMSVFKKVAKGNAARQAAEVPERVIENRLTGFGVHALILLSSLFVPLLAVVPLPVVSGVFLYLGRKVMGG---------NVFLQRCKKLWIDEAALDSKDEGGEKEMVALGRWSVFRFTAFQGLCLAGLWALRCNPSTALVFPSVIGVLMLIRVKLIPRLFSRRELSLLDTPIG 401
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A1E7FWX8_9STRA (Bicarbonate transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWX8_9STRA)

HSP 1 Score: 199 bits (507), Expect = 4.130e-56
Identity = 107/212 (50.47%), Postives = 144/212 (67.92%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEF---EEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKAL 628
            I+VR VN P ++L+K  AY+ D+ AL +IT  LS+ GLPWMC ATVQS+ HV+++ +     E G   I    ETRLTG  VH  IA SLLLLP++  IP+PV+SG+FLFLGR++M         +GN FL R++  + EK +L ED+P+R  GR     +T +Q+ CL GLWA K NP+TA++FPS IG+LM IRI++LP +F EEEL  L
Sbjct:  447 ISVRVVNNPDNKLKKGAAYNLDMVALGLITGVLSVLGLPWMCGATVQSMNHVKALTDSVYNAETGETEIVDVTETRLTGFLVHAMIAGSLLLLPLVRLIPIPVVSGVFLFLGRKLM---------KGNSFLQRIRDTFVEKKRLLEDNPIRMLGRKRTALFTIIQSLCLMGLWAFKQNPSTAIFFPSAIGMLMVIRIFVLPKIFDEEELVEL 649
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A7S3B5Q5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B5Q5_9EUKA)

HSP 1 Score: 188 bits (478), Expect = 9.700e-56
Identity = 106/224 (47.32%), Postives = 142/224 (63.39%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEFEEGGG------EVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEK----AKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEELKALDSSVG 643
            ITVRTVN+P H+L+K  AYH DL AL ++T   SL GLPWMC+ATVQSL H+R+M+ + +         E+  +  ETR+TG  VH  I AS L +PV+  +P+ V+SG+FL+LG+++M+G         N FL R K+V+ E     A L  +      GR A  R+T VQ  CL  LWALK+NPATAL FPS+I VLM IR+ ++P  FS  EL  LD+ +G
Sbjct:   39 ITVRTVNSPAHKLKKGAAYHLDLFALGLLTGAASLMGLPWMCSATVQSLNHIRAMSIYTKSTSPDGAVLELPEKVIETRVTGFGVHAAILASALFIPVLKSVPLAVVSGVFLYLGKKVMSG---------NQFLRRCKTVFLESESLDAGLEGEKEQLILGRMAVARFTGVQVLCLAALWALKLNPATALIFPSLIAVLMIIRVKLIPQHFSPRELTLLDTPIG 253
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: A0A1Z5JKD1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKD1_FISSO)

HSP 1 Score: 196 bits (499), Expect = 3.080e-55
Identity = 104/209 (49.76%), Postives = 143/209 (68.42%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAEF---EEGGGEVIARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEEL 619
            I+VR VN P ++L K  AY+ D+ AL +IT  LSL GLPWMC ATVQSL+HVR+M E    EE G   I +  ETR+TG  VH  +AA++ LLP++  +P+PV++G F+FLGR++M+G         N FL R++  + E ++LP+DHP+R  GR     +T  Q ACL GLW  K N ATA++FPS+IG+LM IR ++LP LF+E+EL
Sbjct:  412 ISVRVVNNPDNKLSKGAAYNLDMVALGIITGALSLVGLPWMCGATVQSLSHVRAMTETRFNEETGEPEIVKVTETRVTGFTVHALLAATVFLLPLLRFVPIPVVAGTFIFLGRKLMSG---------NSFLQRVRDSFVETSRLPKDHPIRYIGRTKTAIFTVTQIACLLGLWFFKQNSATAIFFPSMIGLLMVIRSYLLPKLFTEDEL 611
[Close]
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Match: B7FQY4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQY4_PHATC)

HSP 1 Score: 196 bits (497), Expect = 1.090e-54
Identity = 105/209 (50.24%), Postives = 143/209 (68.42%), Query Frame = 2 
Query:    2 ITVRTVNAPRHRLRKPVAYHQDLGALAVITLGLSLCGLPWMCAATVQSLAHVRSMAE--FEEGGGEV-IARCRETRLTGLAVHGGIAASLLLLPVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAKLPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLMGIRIWILPHLFSEEEL 619
            I+VR VN P ++L+K  AY+ D+ AL +IT  LSL GLPWMC ATVQSL HVR++ E  F E  GE  I    ETR+TG AVH  I ++L +LP++  +P+PV++G+FLFLGR++M+G         N FL R++  + EK++LP DHP+R  GR     +T  Q  CLGGLW  K N  TA++FPSVIG+LM IR ++LP +F+E+EL
Sbjct:  452 ISVRVVNNPDNKLKKGAAYNLDMVALGLITSCLSLVGLPWMCGATVQSLNHVRALTETRFNERTGEPEIIGVTETRVTGFAVHALICSTLAILPLLRFVPIPVVAGVFLFLGRKLMSG---------NSFLQRIRDCFVEKSRLPADHPIRYIGRKKTNIFTVTQIGCLGGLWFFKQNSTTAIFFPSVIGLLMLIRAFVLPKVFTEDEL 651
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig100.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XU58_HETAK5.860e-13795.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XU83_HETAK4.800e-13595.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1GQR4_CYCTE9.520e-6351.42Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2YS88_9STRA5.070e-6150.92Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z9L625_9SYNE1.510e-5950.92Uncharacterized protein n=1 Tax=Synechococcus sp. ... [more]
A0A7S4AXV5_CHRCT7.800e-5748.02Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A1E7FWX8_9STRA4.130e-5650.47Bicarbonate transporter n=1 Tax=Fragilariopsis cyl... [more]
A0A7S3B5Q5_9EUKA9.700e-5647.32Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A1Z5JKD1_FISSO3.080e-5549.76Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7FQY4_PHATC1.090e-5450.24Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig100contigH-akashiwo_Contig100:1620450..1626077 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr43194
PFAMsHCO3_cotransp
Model size779
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons6
Evalue9e-42
EggNOG OGsKOG1172@1|root,KOG1172@2759|Eukaryota,2XAP6@2836|Bacillariophyta
Ec32 ortholog descriptionBicarbonate transporter, eukaryotic
Ec32 orthologEc-22_001570.1
DescriptionHCO3- transporter family
Cds size531
COG categoryP
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig100.35.2prot_H-akashiwo_Contig100.35.2Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig100 1620577..1624142 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387047.0832946-UTR-H-akashiwo_Contig100:1620449..16205761681387047.0832946-UTR-H-akashiwo_Contig100:1620449..1620576Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig100 1620450..1620576 -
1681387047.1555724-UTR-H-akashiwo_Contig100:1624142..16241991681387047.1555724-UTR-H-akashiwo_Contig100:1624142..1624199Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig100 1624143..1624199 -
1681387047.1655385-UTR-H-akashiwo_Contig100:1626013..16260771681387047.1655385-UTR-H-akashiwo_Contig100:1626013..1626077Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig100 1626014..1626077 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387047.0959127-CDS-H-akashiwo_Contig100:1620576..16206491681387047.0959127-CDS-H-akashiwo_Contig100:1620576..1620649Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig100 1620577..1620649 -
1681387047.105908-CDS-H-akashiwo_Contig100:1621089..16211971681387047.105908-CDS-H-akashiwo_Contig100:1621089..1621197Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig100 1621090..1621197 -
1681387047.1152534-CDS-H-akashiwo_Contig100:1621625..16217251681387047.1152534-CDS-H-akashiwo_Contig100:1621625..1621725Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig100 1621626..1621725 -
1681387047.1282334-CDS-H-akashiwo_Contig100:1622550..16227421681387047.1282334-CDS-H-akashiwo_Contig100:1622550..1622742Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig100 1622551..1622742 -
1681387047.1449132-CDS-H-akashiwo_Contig100:1624084..16241421681387047.1449132-CDS-H-akashiwo_Contig100:1624084..1624142Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig100 1624085..1624142 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig100.35.2

>prot_H-akashiwo_Contig100.35.2 ID=prot_H-akashiwo_Contig100.35.2|Name=mRNA_H-akashiwo_Contig100.35.2|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=177bp
MCAATVQSLAHVRSMAEFEEGGGEVIARCRETRLTGLAVHGGIAASLLLL
PVIAQIPMPVISGIFLFLGRRIMTGGWWAGKRRGNGFLGRLKSVWAEKAK
LPEDHPVRAAGRGAALRYTAVQAACLGGLWALKMNPATALYFPSVIGVLM
GIRIWILPHLFSEEELKALDSSVGEG*
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mRNA from alignment at H-akashiwo_Contig100:1620450..1626077-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig100.35.2 ID=mRNA_H-akashiwo_Contig100.35.2|Name=mRNA_H-akashiwo_Contig100.35.2|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=5628bp|location=Sequence derived from alignment at H-akashiwo_Contig100:1620450..1626077- (Heterosigma akashiwo CCMP452)
CATCACCGTGCGCACCGTGAACGCGCCCCGGCACCGGCTGCGCAAGCCGG
TGGCGTACCACCAGGTGGTGATGATGAGGGGGGCGGGGGGCGGGGGGGTG
GTCTTCTTCTTGGAGGACGGGGGCTCCTCCGCATATCCAGAGTACTACTG
ATTCACTATGCAAATACATCCTATTGGCAGATCTACTGTTCTAGCTACCC
GTATCTTCCTACCACCACACTGAACATGTATATATAGTCCGGCATCATCC
GGACCGCGCACAACGGAACGTCATGGCCACCACACCATGGTAGCTATCTC
GGGGCTGTTACCCTCGGAGTGCTAGCGGCGGCCATCTCGGACTGTTGATG
TTATCCCGACACATGATATCATACATTGTTTGTGCGGTCCCGAGGTGCCG
CGCAAATGTTCTTTGTTCATCCGTGCTTGCTTGTGCCGCTCGTATTGAGC
AATGATTAGCATGGCATGACTCCGCATGCAGAGGCGGGCCGCGGTCGCCG
GCAGTGATGAGTGATGATGTTATGGTGAAAGAAGATTGGATTTTGGTTTA
GTTAGTTATGAAGAAGTAAGTATAAGGTGTTTTGTTTTGCCTTTGTGGTT
GGCAAAACACCTCAAGAAAATTTCAGATTCAGTGATGATAGATTAGTTGA
CTGATTAGTTCAGAAAAGGCAATGAAACAGGTGGAATTGCAAAAGGCTAA
ACATAGGCAGTTGGTCACTAGTTGAAAGATATCTATAGGCCTTCTGATTG
GTAAAAATGTGAGAAAATAATGTATAAGCGGAAATGCAGCGGCAGCACGG
AGGAGGGTGCTGCTATAATTGACAACGGAACCGAATTTCGGAACTCACAT
ATTTCTGTTATCGGTCTGGTATAAGTATCTTACTTGAACAAACGGGCACA
AGGACAACCCTGCCTTCAACGGCATTGCTGAAAGATGTAATCGAATTGTT
CTTGACATGACACGTGTGGTTCTAAGAGCCAGTGGCCTCTTAAATTGTCA
TTGGCAATTGGTCAGAAGCAGACAAATATTCCATTCACGCGATCAACAGA
ACAATTATACATCGGGGTCATCAGAACGCAAAACACCTTATGAATCGTTG
TTCAACAAGAAGGCCAGGGTTGATCATTTTCGGGTCTTTGGCTCTATATC
TGATGATATGCTCATTGTCCTGCGGAGACCAGGCCACAAGTTGTTGCAAG
CACGTGCTGTCAAGTGTCGTTTTCTTTCTCAGAATGCATTGGAGAAGACA
TACACAATAATACACATTGCCAATATATTGCATGAGATAATTATTAACAA
TAATAATGAACATTTGGTATGGGAGCTACTTGCTCCTGCATTGTTTGCTG
TCATGCAGTGTTCATATTATCAAGGATGTACTATAATCAAGGACTATACT
TTGTTTAAGTCTATTCAAGTTTGTACAACCAGCAGAAGTAACACATCGCC
AGTACCAAGATGCATGAGATGCACTTCGACATAGTGTCCATCGCAGATGT
ACCCATTTTCACCGGTGCCCCGAAACACAAGTCTCGAGAACACAGAACCA
AAGTTTGTAACAGGGAATGCTCAAAGCTCCGGGGAAGGGCACGACCCTCT
GCCAGTGCCTCCGGCTGTCTGACTTCCGAATGGTATTATATTATATATAT
GAACACACAAACACACACAACATGTCACCAAGGAGACTCTTTCACCCAGG
CTACTTACTGCCTTGCGCCACCAGAAAGGCCCTCCGGCCCTGTTGGAAGA
ACCCTTACCGCCCCGCCCTGCCGCCCTGCCCCGACAAGATCAAGAAGAAC
ACCTAAGAACTAACCCCACCTCAAGAAGAAGAAGAAACAACGCCCCCCCT
CTCCATCCTCCCCCCCCCCCCCCCTCAGGACCTGGGGGCGCTCGCGGTGA
TCACGCTGGGCCTGAGCCTGTGCGGGCTGCCCTGGATGTGCGCCGCCACC
GTGCAGAGCCTGGCCCACGTGCGCTCCATGGCCGAGTTCGAAGGCGAGGG
GGGAGGGGGGGGGGAGGGGCGCGCGCCCGCCGAAGCCGCAACCGCCGCCG
CAGGCTCGGGGAGGAGGCGATGTGGGATCAATGGTAATTTTATACTACAG
TTCAAAAAATTTCAACAGTGTACACAGATTTTTACGCAAGCCAAATTTTT
CAATGGCAAAACTTTTGGGGGCGCAAAGTCACAAAAATATGATCATTTAC
AGCAATAGTTTGGAATCTATAATGTAGATTTTCTTTATCAATGAAAGAAA
ATAATTTCAAGCACGGCTATACACTGGCTTCTACTCCTACATCATGCAGC
ACCTTCTATTTCAAGCAACGATCGCTCTTCTAAAATGAACTAGGTTTTTT
TAGTAATATACAAGAACAAGCAAGCTTCTTCTTTGTGTTCTTTTTTTCTT
CCACCAATGTGGTGACAAGAAAGAAATATAAGCGACGTTCTTTTCTGCAC
AACAACCCGAAAGGAGATGATGATGCTCCTCGATGATGATATCATCTCGA
GTTCGACTGCCGCTTCTGAGTTATTTTTTGTGCTGTGTTCTGAGGCAAGC
AGCAGCAGCAGAATAACTGCTGCTTCATTTTTTTTTTGTGTGTTCTGAGG
CAGTCAGAACTTTCTGAATCAGTTCGAGTACTTCCCTCCTTCCTCCTTTG
CTCAGATTTACCTTTCCCCGCCGCGCATCATGTGTAAAAAGAACGATTCA
TCGAAATTTTAGCTGTAAAATTTAGGGGCGGTATATTTTTTACAACCGTA
ATGCATTCATATGGTCGTCATTTTTCAGTGGAAGAAGTGGAAGTTTGGGA
CGGGATGGGAAGGAGGGTGAGTGTGGTTGTCTGAGAAGATTGGTGTCCAG
GAAGACAATAGTACATACACTATAGTATCTATAGTTAGCAGCATTGGTAA
CAACAATGTACTACTACAACAGTATTGGTACTATATTAAAAAAAAAAAAC
AGAAACTGGAAACTATAAGGCGTAATAATATATACGGTGAATATATAGAT
AGCGTATGAGGTTATACATAAAAATGGTGTTATCCCAGTCTAACAATATC
CTCTGGGCCGCCTACTGAAAAACAACAATGGCTAATTTGCTTTATACCAC
ATAAACAGAACATCATCTCTCTATAGCAGTCACAATAATATAGTCGATAG
GAATGTTGTGGCAGAAACTGCCCGCTCCGTGCTTTCGTTGCGCTTGTGTA
TGGTGCGGCGCGGCCCAACGGTTGCCAGAGCCAACGGCCGTCCTCCCCCC
AAGCCCGCCACCCGGCGCCGGCGCATCCGGATGTACATACCCCACCCCCC
CCCCTCCCCCCTCCCGGGTCGGATCGCACCCCCAGAGGGCGGCGGCGAGG
TCATCGCGCGGTGCCGGGAGACGCGGCTGACGGGGCTGGCGGTGCACGGG
GGCATCGCCGCCTCGCTGCTGCTGCTGCCTGTGATCGCCCAGATCCCCAT
GCCCGTGATCTCGGGCATCTTCCTCTTCCTCGGCCGCCGCATCATGACAG
GTGGTTGGTGGGCAGGGAAGAGGAGGGGCAGGGGCGGCGAATGGCGCTGG
GTCTGGTGAAAATGTAGCTGAGAGGTGGTGGCGGGCTGTTGCAGTTGGGA
TTGTTCTTAATAAAAGCCTACTATCCAAAAACGGCTTTTTTTATCGTTCC
TCTTCTTGTATTATAATTCTGAGCCACAAAATGTTTTGTCATTTTGCATG
CACCCTGACATCTGGCACAAGCTGTGTCGGGCACTTAGAAGTGGCCCTGG
CAGCTTGTGGTAAGACATCAGCAACGCCAGTGGTGAGAGTCCCACGACAA
GCTGCTCCATATAGTGGTCGAGCGGTTAAAGAGTTAAACTAGCGGTGCAA
CGAAGCTTGTGCCCCAGGTTCGAGTCTCGCCTCTGAACTTTGGTAATCGA
GCGCCCGTCTATAGTCAATTTCTCGAAAACGCTTGGACCATGGGCCCAGT
CATCATCGGATCTCGGTAGTCGGAGAAGGGCAAGGATTGGATACGATGGT
GGCGATCAGGAGGAGTGGCGTGGGTGGAGATGAGTCGGAACCTCCTGGAG
TGGACAACTTACGGAAGGGTACAGCGATCTGACAGAGCGGTAACAGAAGG
AGGTCGTCAGTGAAGGATGGTCGTCCGAGGTGCATCAAGGAGATGTTCGC
GAGCATTGGAAGGCGCGATGATACGAGCGCCAACACTACAAGGTTCACAT
CGACAAGCTCAGAGATGGCTCAACATGACAGAAAGGGTCGCGGCTGGAGT
AGAGGACCTTCCTCAGGATGTGACGAGGCATGAGAACGTATAAAAAAAAA
AAAAAAAAAATATATTGTTGCTTCCCCCCCACCCTCCCCGTGCTGCGGGC
AGGCAACGGGTTCCTGGGCCGGCTGAAGTCCGTGTGGGCGGAGAAGGCGA
AGCTGCCTGAGGACCACCCCGTCCGCGCTGCCGGCCGTGGGGCCGCCCTG
CGGTGGGGGGGGGGGGCTTGTTGGTTGGTTGCTGCTGCTGCGTGGTGGCG
GCCTCTGCGAGAAAGGCGTCTTGATGAGCGGGGGGAGGGTCGGGCTTGTT
GTTTTCGTGACCATTTCGCATGGTCAGCTTTGTTTAGAAGAACAGCCCTG
TTTCACATAATCAGAAGATCATACTTTGCAAAGTTTTCCACACTGTGTGT
TAGTAGATCAGACATTGCTCCGTTTCGCCAATATTGCACATACCCCACAG
CTCCCGCTCCCACATTTGCCTACTCCGCCCCAACAACGCCCTCCTTTCCC
CTTCGCCGCCACCTCAATCCCCTCCGCGTCCTCCCCCCCTCCCGACCGCC
CCCCCCTCTCCCTTCCTCCCCCGGCGGCGGCGGCGGCACGGGCGGCGCTG
CCTGTCCGCCCCGCGCCCCGCCGGCCGCAGGTACACGGCCGTGCAGGCGG
CCTGCCTGGGCGGGCTCTGGGCGCTGAAGATGAACCCCGCCACCGCGCTC
TACTTCCCCAGCGTGATCGGCGTGCTCATGGGCATCCGGTGGGGCTGTCC
ACCGGGGGGGTGGGGGGGGCGCCCGCCTCGCTTGTATAGAAGAAGATCGG
GCTGGGAATACTGAAGAAGATCGGACTCTCGATCGAAATATTTATAGTTC
CAATGAAGAAGTTCTGTTGGATTCTAAAAAGTGTCCTTATCAATCAATCT
CTCATTGATTATTATTATATTATTGTTGTTGATATATAGTAGTGATTTGG
CCGATTTGGTGTCTCTTTGAAGAAATCATGACATGTCCAAACGTCGGGAG
CTGGAGAGGAGGAGGGGTATTATTTGCTACATAATAATAATTGTTCCAAT
CCATCGGGGATCATTTTTCCAATAAAAAAACTATCTATTGTGATGTTGTG
ATGATGACAAATACTTCTCACAACTCTATCATGATGAATGATGACCTTAT
TAACCCCCCCTTTTTGTTCTTTCTTCAGGATCTGGATTCTTCCACATTTA
TTTTCCGAAGAAGAGCTGAAAGCTCTGGATAGTTCTGTAGGCGAGGGCTG
AGATAATTGTACTATACTACTAACTAGTAGTAGTATCAAGAAAGAAGGGG
ACATGTTATCAGCATCCACAGCAACAAATGAGTTGTTACTACTTTTGAAA
ATCTTATCTTTATCATATATAGTCATTT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig100:1620450..1626077-

>mRNA_H-akashiwo_Contig100.35.2 ID=mRNA_H-akashiwo_Contig100.35.2|Name=mRNA_H-akashiwo_Contig100.35.2|organism=Heterosigma akashiwo CCMP452|type=CDS|length=531bp|location=Sequence derived from alignment at H-akashiwo_Contig100:1620450..1626077- (Heterosigma akashiwo CCMP452)
ATGTGCGCCGCCACCGTGCAGAGCCTGGCCCACGTGCGCTCCATGGCCGA
GTTCGAAGAGGGCGGCGGCGAGGTCATCGCGCGGTGCCGGGAGACGCGGC
TGACGGGGCTGGCGGTGCACGGGGGCATCGCCGCCTCGCTGCTGCTGCTG
CCTGTGATCGCCCAGATCCCCATGCCCGTGATCTCGGGCATCTTCCTCTT
CCTCGGCCGCCGCATCATGACAGGTGGTTGGTGGGCAGGGAAGAGGAGGG
GCAACGGGTTCCTGGGCCGGCTGAAGTCCGTGTGGGCGGAGAAGGCGAAG
CTGCCTGAGGACCACCCCGTCCGCGCTGCCGGCCGTGGGGCCGCCCTGCG
GTACACGGCCGTGCAGGCGGCCTGCCTGGGCGGGCTCTGGGCGCTGAAGA
TGAACCCCGCCACCGCGCTCTACTTCCCCAGCGTGATCGGCGTGCTCATG
GGCATCCGGATCTGGATTCTTCCACATTTATTTTCCGAAGAAGAGCTGAA
AGCTCTGGATAGTTCTGTAGGCGAGGGCTGA
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