mRNA_H-akashiwo_Contig10.84.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: A0A6V1SRW4_HETAK (ER membrane protein complex subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SRW4_HETAK) HSP 1 Score: 342 bits (877), Expect = 1.860e-118 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 2
Query: 41 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSGVPLGGP 562
MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSGVPLGGP
Sbjct: 1 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSGVPLGGP 174
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: A0A7S2DUV1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUV1_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.410e-40 Identity = 79/168 (47.02%), Postives = 108/168 (64.29%), Query Frame = 2
Query: 53 RRWAYDLTLNSTEKNALKDIPDPPGL-LKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSGVPL 553
+RW DL N +E +++ +P G L + E+D K +D K LK K A + A AP KNI M GFMM+M+G INIFSIMM +M+ NP+ AI GI++AF + +DGT+DL +PKL F +N+L + G++KC MGLLP T+ADW YL KV + SGVP+
Sbjct: 7 KRWTVDLVPNPSEHAIIREAVNPLGFDLNALVEVDAAGKKEKDL---KGLKTKMAMDIATAPGKNILMNGFMMYMTGSYINIFSIMMLSMSLWNPLNAIAGINKAFTKVDDGTVDLIMPKLIFFCLNVLSLCVGLWKCGRMGLLPITSADWTSYLLTKVDVSSSGVPI 171
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: UPI000C1D7003 (ER membrane protein complex subunit 4-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7003) HSP 1 Score: 142 bits (357), Expect = 2.390e-39 Identity = 73/173 (42.20%), Postives = 109/173 (63.01%), Query Frame = 2
Query: 41 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSG--VPL 553
M + RRWA + T NST N+ +DIPDPPG +++ + D+ + E K ++A + A +PFKN+ M GFMMWMSG +++FSI +T A P+ A+ G+D+ F + D +DL PKL F A+NL+G+G G++K T+GLLPT +DW +A +E+SG +PL
Sbjct: 8 MGSGRRWAVEFTDNSTS-NSARDIPDPPGFTRASHDPDDSAVSKQKKDAEANWKAQKAWDVAQSPFKNLCMMGFMMWMSGSTVHLFSIGITFSALWQPVNALRGVDKVFEPYKDNRVDLLAPKLVFTALNLVGLGMGIWKLNTLGLLPTHVSDWVSSIAPAQEVEYSGGGIPL 179
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: A0A1V9ZF01_9STRA (ER membrane protein complex subunit 4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZF01_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.970e-39 Identity = 85/167 (50.90%), Postives = 102/167 (61.08%), Query Frame = 2
Query: 53 RRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAK----EKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHS 541
R+WAYDL + P+P G K DE G + TAK ELK KRA E A APFK + GFMMWMSG INIFSIM+TAMAF+NP+KA+ I+ AFA +DG LDL KL FVA N + +G +YKC TMGLLPTT++DW L K +E S
Sbjct: 3 RKWAYDLNAGNA--------PEPLGSNKHT--FDEPSGAV--TAKGGDNTLELKKKRANEVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNINGAFAALDDGKLDLLQFKLIFVASNFVAIGVALYKCGTMGLLPTTSSDWTWLLPVKEAVEAS 157
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: A0A6P5T1Z6_PRUAV (ER membrane protein complex subunit 4 n=7 Tax=Amygdaloideae TaxID=171637 RepID=A0A6P5T1Z6_PRUAV) HSP 1 Score: 140 bits (353), Expect = 9.570e-39 Identity = 77/173 (44.51%), Postives = 108/173 (62.43%), Query Frame = 2
Query: 41 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSG--VPL 553
M A RRWA DLT NST ++ +D+PDPPG +++ E D+ + E K ++A E A APFKN+ M GFMMWM+G +++FSI +T A PI A+ G+ + F + D +DL PKL F+A+NL G+ GV+K T+GLLPT A+DW L +E+SG +PL
Sbjct: 8 MGAGRRWAVDLTDNSTSPSS-RDVPDPPGFSRTSLEQDDSTVSRQKKDAESTWKAQKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLIAPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAQEVEYSGGGIPL 179
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: UPI000C1CE62D (ER membrane protein complex subunit 4-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE62D) HSP 1 Score: 140 bits (352), Expect = 1.350e-38 Identity = 75/173 (43.35%), Postives = 108/173 (62.43%), Query Frame = 2
Query: 41 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYL--AAKVPLEHSGVPL 553
M + RRWA + T NS+ ++ +DIPDPPG + A + D++ + E K ++A E A APFKN+ M GFMMWMSG +++FSI +T A PI A+ G+ + F + D +DL +PKL F+A+NL+G+G GV+K T+GLLPT +DW L A +V G+PL
Sbjct: 8 MGSGRRWAVEFTDNSSSPSS-RDIPDPPGFTRGAHDQDDLLVNKQKKDAEANWKSQKAWEVAQAPFKNLFMMGFMMWMSGSTVHLFSIGITFSALWQPINALRGVGKVFEPYKDNKVDLLLPKLVFIALNLVGLGMGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPL 179
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: A0A5J5A6L4_9ASTE (ER membrane protein complex subunit 4 n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A5J5A6L4_9ASTE) HSP 1 Score: 139 bits (351), Expect = 1.860e-38 Identity = 75/173 (43.35%), Postives = 109/173 (63.01%), Query Frame = 2
Query: 41 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSG--VPL 553
+M RRWA D T NST ++ +DIPDPPG +++ + D+ + E K+++A E A APFKN+ M GFMMWM+G +++FSI +T A PI A+ G+ + F + D +DL PKL F+A+NL G+ GV+K T+GLLPT A+DW L+ +E+SG +PL
Sbjct: 7 VMVGRRWAVDFTDNSTTPSS-RDIPDPPGFTRASHDQDDSTLSRQKKGAEANWKVQKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLSPAQEVEYSGGGIPL 178
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: A0A2I4G6N1_JUGRE (ER membrane protein complex subunit 4 n=2 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4G6N1_JUGRE) HSP 1 Score: 139 bits (350), Expect = 2.630e-38 Identity = 77/173 (44.51%), Postives = 106/173 (61.27%), Query Frame = 2
Query: 41 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSG--VPL 553
M+ RRWA D T NST + +DIPDPPG +S+ + D+ + E K ++A E A APFKN+ M GFMMWM+G +++FSI +T A PI A+ G+ + F + D +DL PKL F+A+NL G+ GV+K T+GLLPT A+DW L +EHSG +PL
Sbjct: 8 MVGGRRWAVDFTDNSTSPS--RDIPDPPGFSRSSQDQDDSTLSRQKKDAESNWKSQKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSRVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVFSLPPAQEVEHSGGGIPL 178
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: A0A6I9T8F1_SESIN (ER membrane protein complex subunit 4 n=8 Tax=Lamiales TaxID=4143 RepID=A0A6I9T8F1_SESIN) HSP 1 Score: 139 bits (349), Expect = 3.830e-38 Identity = 73/173 (42.20%), Postives = 108/173 (62.43%), Query Frame = 2
Query: 41 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSG--VPL 553
M + RRWA + T NST ++ +DIPDPPG +++ E D+ + E K ++A E A APFKN+ M FMMWM+G +++FSI +T A L P+ A+ G+ + F + D +DL PKL F+A+NL+G+G G++K T+GLLPT +DW L +E+SG +PL
Sbjct: 8 MGSGRRWAVEFTDNSTSHSS-RDIPDPPGFTRASQEQDDSALSKQKKDAEANWKAQKAWEVAQAPFKNLFMMAFMMWMAGSTVHLFSIGITFSALLQPVNALRGVGKVFEPYKDNKVDLLAPKLVFIALNLVGLGLGIWKLNTLGLLPTHVSDWVSSLPPPQEVEYSGGGIPL 179
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Match: A0A2P6PY65_ROSCH (ER membrane protein complex subunit 4 n=6 Tax=Rosaceae TaxID=3745 RepID=A0A2P6PY65_ROSCH) HSP 1 Score: 139 bits (349), Expect = 3.830e-38 Identity = 76/173 (43.93%), Postives = 106/173 (61.27%), Query Frame = 2
Query: 41 MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSG--VPL 553
M A RRWA DLT NST +D+PDPPG +++ + D+ + E K ++A E A APFKN+ M GFMMWM+G +++FSI +T A PI A+ G+ + F + D +DL PKL F+A+NL G+ GV+K T+GLLPT A+DW L +E+SG +PL
Sbjct: 8 MGAGRRWAVDLTDNSTSP-CCRDVPDPPGFSRASSDQDDSTVSRQKKEAESTWKSQKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAQEVEYSGGGIPL 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig10.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig10.84.1 >prot_H-akashiwo_Contig10.84.1 ID=prot_H-akashiwo_Contig10.84.1|Name=mRNA_H-akashiwo_Contig10.84.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=175bp MMADRRWAYDLTLNSTEKNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEback to top mRNA from alignment at H-akashiwo_Contig10:3494327..3497254- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig10.84.1 ID=mRNA_H-akashiwo_Contig10.84.1|Name=mRNA_H-akashiwo_Contig10.84.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2928bp|location=Sequence derived from alignment at H-akashiwo_Contig10:3494327..3497254- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig10:3494327..3497254- >mRNA_H-akashiwo_Contig10.84.1 ID=mRNA_H-akashiwo_Contig10.84.1|Name=mRNA_H-akashiwo_Contig10.84.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=525bp|location=Sequence derived from alignment at H-akashiwo_Contig10:3494327..3497254- (Heterosigma akashiwo CCMP452)back to top |