mRNA_H-akashiwo_Contig10.121.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig10.121.1
Unique NamemRNA_H-akashiwo_Contig10.121.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: A0A6V2YPM3_HETAK (60S acidic ribosomal protein P0 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2YPM3_HETAK)

HSP 1 Score: 544 bits (1401), Expect = 4.550e-194
Identity = 310/317 (97.79%), Postives = 311/317 (98.11%), Query Frame = 1
Query:    1 MPSEKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXX--ADVGAGDMFGGSDY 945
            MPSEKKIEYFSRMEGMI TYTKCFIVGVDNVGSHQMQQIRLAL GEAEVLMGKNTMMRKVIAEFM KNPG+PFEQIS KLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXX  ADVGAGDMFGGSDY
Sbjct:    1 MPSEKKIEYFSRMEGMIETYTKCFIVGVDNVGSHQMQQIRLALRGEAEVLMGKNTMMRKVIAEFMKKNPGHPFEQISAKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXADVGAGDMFGGSDY 317          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: A0A4D9D366_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D366_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 1.800e-138
Identity = 234/313 (74.76%), Postives = 262/313 (83.71%), Query Frame = 1
Query:   13 KKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXX--ADVGAGDMFGGSDY 945
            KK +YF R+E ++G+YTK F+VGVDNVGS QMQQIR AL G A VLMGKNT +RKV+  F+ KNPG+P EQ+   + GNVG VFTNGDLG VR  +EENRVPAPARVGS+AP  VIVPPGPTGCDPGQTSFFQ LQIATKI++GQIEI   V +L  GDKVGNSEA LLQKL+I PFTYGLVI +IYDNGSLFD KVLDLTDADL AKF  AV  +A++ L++GYPTLAS+PHSIANAFK  VAVAV  E FSFEKAEP+KAYL DPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXX  AD+GAG+MFGG  Y
Sbjct:    8 KKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVAVGLEEFSFEKAEPFKAYLKDPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXXEADIGAGNMFGGDGY 320          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: D0NVM9_PHYIT (60S acidic ribosomal protein P0 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NVM9_PHYIT)

HSP 1 Score: 399 bits (1025), Expect = 7.890e-137
Identity = 224/315 (71.11%), Postives = 256/315 (81.27%), Query Frame = 1
Query:    1 MPSEKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXADVGAG-DMFGGSD 942
            +  E+K+EYF ++E ++  YTK F+VGVDNVGS QMQQIRL L G AEVLMGKNT+MRKV   F+ KNPG+P E     L+GNVG VFTN DL E+R  +E NRVPAPARVGSIAPV+VIVPPGPTG DPGQTSFFQ LQIATKI +GQIEIV  V L   G+KVGNSEAALLQKLDIKPF+YGLVI+ +YDNGS+FD  VLDLT+ADL AKF+A +  +A++ LE+G PTLAS+PHSIANAFK LVA+AVECE FSFEKAEPYKA+LADPSAFA      XXXXXXXXXXXXXXXXXX   D+G G DMFGG D
Sbjct:    3 LSQERKLEYFDKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFNNFVKKNPGHPLELFIPLLKGNVGFVFTNDDLSEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVMLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGIPTLASIPHSIANAFKDLVAIAVECEEFSFEKAEPYKAFLADPSAFAVAAPAGXXXXXXXXXXXXXXXXXX--VDMGGGMDMFGGGD 315          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: W7U6S0_9STRA (60s acidic ribosomal protein p0 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6S0_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 2.320e-136
Identity = 233/313 (74.44%), Postives = 261/313 (83.39%), Query Frame = 1
Query:   13 KKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXX--ADVGAGDMFGGSDY 945
            KK +YF R+E ++G+YTK F+VGVDNVGS QMQQIR AL G A VLMGKNT +RKV+  F+ KNPG+P EQ+   + GNVG VFTNGDLG VR  +EENRVPAPARVGS+AP  VIVPPGPTGCDPGQTSFFQ LQIATKI++GQIEI   V +L  GDKVGNSEA LLQKL+I PFTYGLVI +IYDNGSLFD KVLDLTDADL AKF  AV  +A++ L++GYPTLAS+PHSIANAFK  VAV V  E FSFEKAEP+KAYL DPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXX  AD+GAG+MFGG  Y
Sbjct:  109 KKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXXEADIGAGNMFGGDGY 421          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: M4B8B5_HYAAE (60S acidic ribosomal protein P0 n=11 Tax=Peronosporaceae TaxID=4777 RepID=M4B8B5_HYAAE)

HSP 1 Score: 396 bits (1018), Expect = 8.820e-136
Identity = 222/316 (70.25%), Postives = 256/316 (81.01%), Query Frame = 1
Query:    1 MPSEKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXADVGAG-DMFGGSDY 945
            +  E+K+EYF ++E ++  YTK F+VGVDNVGS QMQQIRL L G  EVLMGKNT+MRKV   F+ KNPG+P E     L+GNVG VFTN DL E+R  +E NRVPAPARVG+IAPV+V+VPPGPTG DPGQTSFFQ LQIATKI +GQIEIV+ V L   G+KVGNSEAALLQKLDIKPF+YGLVI+ +YDNGS+FD  VLDLT+ADL AKF+A +  +A+V LE+G PTLAS+PHSI NAFK LVA+AVECE FSFEKAEPYKA+LADPSAFA      XXXXXXXXXXXXXXXXXXX  D+G G DMFG  DY
Sbjct:    3 LSQERKLEYFGKLETLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRGEVLMGKNTLMRKVFNSFVKKNPGHPLENFIPLLKGNVGFVFTNDDLTEIREVLESNRVPAPARVGAIAPVDVVVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVSEVMLTKKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAVSLELGLPTLASIPHSITNAFKDLVAIAVECEEFSFEKAEPYKAFLADPSAFAVAAPAGXXXXXXXXXXXXXXXXXXX-VDMGGGMDMFGAEDY 317          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: F0YML5_AURAN (60S acidic ribosomal protein P0 n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YML5_AURAN)

HSP 1 Score: 392 bits (1007), Expect = 5.100e-134
Identity = 191/273 (69.96%), Postives = 229/273 (83.88%), Query Frame = 1
Query:   10 EKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVEC-ETFSFEKAEPYKAYLADPSAFA 825
            E+K EYF +MEG++  Y+K FIV  DNVGS Q QQIR+AL GEA VLMGKNTMMRKV+  ++ KNPG+P+E +  K+ GN+G VFTNGDLG+VR  IE+NRVPAPARVG+IAP++VIVPPGPT CDPGQT+FFQ LQIATKI +G+IEI +PV+LL AGDKVGNSEA LLQKL I PF YGLVI  +YDNGS+FD KVLDLTD DL  KF AA+S L+S+CL++GYPT+AS+PHS+ANAFK LVA+AVE  + FSF KA P+KA+LADPSAFA
Sbjct:    6 ERKQEYFEKMEGLLDMYSKIFIVSCDNVGSKQFQQIRIALRGEAVVLMGKNTMMRKVVTAYLVKNPGHPYEMLLPKIMGNIGFVFTNGDLGKVRELIEDNRVPAPARVGAIAPIDVIVPPGPTDCDPGQTNFFQTLQIATKIVKGRIEITSPVNLLKAGDKVGNSEAVLLQKLHINPFDYGLVITEVYDNGSMFDVKVLDLTDEDLSIKFGAALSTLSSLCLQVGYPTMASVPHSVANAFKSLVAIAVESGDAFSFAKASPFKAFLADPSAFA 278          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: A0A485KPX2_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPX2_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 2.380e-133
Identity = 210/313 (67.09%), Postives = 256/313 (81.79%), Query Frame = 1
Query:   10 EKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXADVGAGDMFGG-SDY 945
            E+K EYF ++E ++  YT+ FIVGVDNVGS+Q+QQIR+AL G AEVLMGKNTM+RKV A F+ KNPG+P E +   L+GNVG VFTN DLG+VR  +E N+VPAPARVG++AP++V  P GPTGCDPGQTSFFQ LQI TKI +GQIEIV+ V L   G+KVGNSEAALLQKL+I+PF+YGL+I S+YDNGS+FD  VLDLT+ +L AKF+  +  +A+V L +G+PTLAS+PHS+ANAFK LVA+AVECE+FSFEKA+P+KA+LADPSAFA+      XXXXXXXXXX   XXXX   DVGAGDMFGG SDY
Sbjct:    6 ERKAEYFLKLENLLENYTRIFIVGVDNVGSNQIQQIRIALRGTAEVLMGKNTMIRKVFANFVKKNPGHPLETMIPLLKGNVGFVFTNADLGQVRETLEANKVPAPARVGAVAPIDVWCPAGPTGCDPGQTSFFQALQIGTKIQKGQIEIVSDVLLTKKGEKVGNSEAALLQKLNIRPFSYGLIIQSVYDNGSIFDPAVLDLTEENLVAKFVGGLRNVAAVSLALGFPTLASIPHSLANAFKSLVAIAVECESFSFEKADPFKAFLADPSAFASAGPAAGXXXXXXXXXXVEEXXXXEM-DVGAGDMFGGGSDY 317          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: A0A0P6IAI3_9CRUS (60S acidic ribosomal protein P0 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IAI3_9CRUS)

HSP 1 Score: 389 bits (999), Expect = 6.800e-133
Identity = 197/317 (62.15%), Postives = 241/317 (76.03%), Query Frame = 1
Query:    1 MPSEKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXADVG-AGDMFGG-SDY 945
            +  E+K+EYF+++E ++  +TK F+V VDNVGSHQMQQIRL L G AE+LMGKNT+MRKV + F+ KNPG+P E     L+GNVG VFTN DL ++R  +E N+VPAPARVG+IAPV+VI+P GPTGCDPGQTSFFQ L I TKI++GQIEIV  V ++  G+KVGNSEAALLQKL+I+PF YGLVI  +YDNGSLFD  VLDLT+ DL AKF A +  +A++ LEIG+PTLAS+PHS+ANAFK LVA+AVECETFSF+KA+P+KAYLADPSAFA                          AD+G A DMFGG SDY
Sbjct:    3 LSQERKLEYFTKLETLLENFTKIFLVNVDNVGSHQMQQIRLELRGRAELLMGKNTLMRKVFSNFIKKNPGHPLENFIPLLKGNVGFVFTNADLNQIREVVEGNKVPAPARVGAIAPVDVIIPAGPTGCDPGQTSFFQTLSIGTKIAKGQIEIVTDVLMVKQGEKVGNSEAALLQKLNIRPFAYGLVISQVYDNGSLFDPAVLDLTEDDLCAKFAAGLRNVAAISLEIGFPTLASIPHSVANAFKTLVAIAVECETFSFKKADPFKAYLADPSAFAVAAGPAAGADAGAAKVEEVEEEEE--ADIGGATDMFGGGSDY 317          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: A0A2D4BVG1_PYTIN (60S acidic ribosomal protein P0 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVG1_PYTIN)

HSP 1 Score: 389 bits (999), Expect = 7.040e-133
Identity = 215/316 (68.04%), Postives = 262/316 (82.91%), Query Frame = 1
Query:    1 MPSEKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXADVGAGDMFGG-SDY 945
            +  E+K +YF+++E ++  +TK F+V VDNVGS+Q+QQ+R+AL G+AEVLMGKNT+MRKV   F+ KNPG+P E +   ++GN+G VFTN DL EVR  IE N+VPAPARVG+IAPV+V++P GPTGCDPGQTSFFQ LQ+ATKI RGQIEIV+   L  AG+KVGNSEA LLQKL+I+PF+YG+VI S+Y+NGS+FD KVLDLT+ DL AKF+  +  +A+V LEIG+PTLAS+PHS+ANAFK LVAVAVECETFSF KA+P+KAYLADPSAFA    XXXXXXXXXXXXXXXXXXXXX    GA DMFGG SDY
Sbjct:    3 LTQERKQDYFNKLEQLLENFTKIFLVSVDNVGSNQLQQVRIALRGKAEVLMGKNTLMRKVFHNFLEKNPGHPLENMIPLIKGNIGFVFTNADLNEVREVIESNKVPAPARVGAIAPVDVVIPAGPTGCDPGQTSFFQALQVATKIQRGQIEIVSDQLLTKAGEKVGNSEAVLLQKLNIRPFSYGVVITSVYENGSIFDPKVLDLTEEDLCAKFVTGLRNVAAVSLEIGFPTLASIPHSVANAFKTLVAVAVECETFSFAKADPFKAYLADPSAFAVAAAXXXXXXXXXXXXXXXXXXXXXVDMGGAADMFGGGSDY 318          
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Match: A0A024UJC7_9STRA (60S acidic ribosomal protein P0 n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UJC7_9STRA)

HSP 1 Score: 387 bits (993), Expect = 5.360e-132
Identity = 220/312 (70.51%), Postives = 262/312 (83.97%), Query Frame = 1
Query:   10 EKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVLMGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVECETFSFEKAEPYKAYLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXXXADVGAGDMFGGSDY 945
            E+K EYF ++E ++ TY K F+V VDNVGS+Q+QQIR+AL G AEVLMGKNTM+RKV   ++ KNPG+P E +   LRGNVG VFTNGDLG+VR  +E N+VPAPARV +IAP++V  P GPTGCDPGQTSFFQ LQI TKI +GQIEIVA V L  AG+KVGNSEA LLQKL+I+PF+YGL+I S+YDNGS+FD KVLDLT+ +L  KF+  +  +ASV L +G+PTLAS+PHS+ANAFK LVA+AVE E FSF+KA+P+KA+LADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXX ADVGAGDMFG SDY
Sbjct:    6 ERKGEYFVKLENLLDTYNKIFLVSVDNVGSNQIQQIRIALRGTAEVLMGKNTMIRKVFNNYVRKNPGHPLEGLIPALRGNVGFVFTNGDLGKVRETLEANKVPAPARVNAIAPIDVWCPAGPTGCDPGQTSFFQALQIGTKIQKGQIEIVADVLLTKAGEKVGNSEAVLLQKLNIRPFSYGLIIVSVYDNGSIFDPKVLDLTEDNLVQKFVGGLRNVASVSLALGFPTLASIPHSLANAFKSLVAIAVESENFSFKKADPFKAFLADPSAFAAXXXXXXXXXXXXXXXXXXXXXXXX-ADVGAGDMFGSSDY 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig10.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V2YPM3_HETAK4.550e-19497.7960S acidic ribosomal protein P0 n=2 Tax=Heterosigm... [more]
A0A4D9D366_9STRA1.800e-13874.7660S acidic ribosomal protein P0 n=1 Tax=Nannochlor... [more]
D0NVM9_PHYIT7.890e-13771.1160S acidic ribosomal protein P0 n=16 Tax=Peronospo... [more]
W7U6S0_9STRA2.320e-13674.4460s acidic ribosomal protein p0 n=1 Tax=Nannochlor... [more]
M4B8B5_HYAAE8.820e-13670.2560S acidic ribosomal protein P0 n=11 Tax=Peronospo... [more]
F0YML5_AURAN5.100e-13469.9660S acidic ribosomal protein P0 n=3 Tax=Aureococcu... [more]
A0A485KPX2_9STRA2.380e-13367.0960S acidic ribosomal protein P0 n=1 Tax=Aphanomyce... [more]
A0A0P6IAI3_9CRUS6.800e-13362.1560S acidic ribosomal protein P0 n=1 Tax=Daphnia ma... [more]
A0A2D4BVG1_PYTIN7.040e-13368.0460S acidic ribosomal protein P0 n=1 Tax=Pythium in... [more]
A0A024UJC7_9STRA5.360e-13270.5160S acidic ribosomal protein P0 n=2 Tax=Aphanomyce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig10contigH-akashiwo_Contig10:5439206..5440153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog42099.EPrPV00000018962
PFAMsRibosomal_60s,Ribosomal_L10
Model size948
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.37e-139
EggNOG OGsCOG0244@1|root,KOG0815@2759|Eukaryota,1MEJ8@121069|Pythiales
Description60S acidic ribosomal protein P0
Cds size948
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387045.2828858-CDS-H-akashiwo_Contig10:5439205..54401531681387045.2828858-CDS-H-akashiwo_Contig10:5439205..5440153Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig10 5439206..5440153 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig10.121.1prot_H-akashiwo_Contig10.121.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig10 5439206..5440153 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig10.121.1

>prot_H-akashiwo_Contig10.121.1 ID=prot_H-akashiwo_Contig10.121.1|Name=mRNA_H-akashiwo_Contig10.121.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=316bp
MPSEKKIEYFSRMEGMIGTYTKCFIVGVDNVGSHQMQQIRLALHGEAEVL
MGKNTMMRKVIAEFMNKNPGYPFEQISTKLRGNVGLVFTNGDLGEVRTKI
EENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQI
EIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAK
VLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVA
VECETFSFEKAEPYKAYLADPSAFAAAAAPAGGGGGGDAPPAKKEEEEEE
EADVGAGDMFGGSDY*
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mRNA from alignment at H-akashiwo_Contig10:5439206..5440153-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig10.121.1 ID=mRNA_H-akashiwo_Contig10.121.1|Name=mRNA_H-akashiwo_Contig10.121.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=948bp|location=Sequence derived from alignment at H-akashiwo_Contig10:5439206..5440153- (Heterosigma akashiwo CCMP452)
ATGCCTTCTGAAAAAAAGATCGAGTACTTCTCCAGAATGGAGGGGATGAT TGGAACCTACACCAAGTGTTTCATTGTCGGCGTTGACAACGTGGGTTCCC ACCAGATGCAGCAAATCCGTTTGGCTCTGCATGGCGAGGCTGAGGTGCTC ATGGGCAAGAACACCATGATGAGAAAGGTCATTGCCGAATTCATGAACAA GAACCCTGGTTACCCTTTCGAGCAGATCTCCACGAAGCTGCGTGGCAACG TGGGCCTCGTGTTCACCAACGGCGATCTCGGCGAGGTGCGCACCAAGATC GAGGAGAATAGAGTGCCGGCCCCTGCTCGTGTCGGTTCCATTGCCCCTGT CGAAGTCATCGTACCTCCCGGCCCCACCGGTTGCGACCCGGGCCAGACTT CTTTCTTCCAGGTGCTGCAGATCGCCACCAAGATTTCCCGTGGTCAAATT GAGATTGTCGCCCCCGTGTCCCTGCTGTCTGCTGGTGACAAGGTGGGCAA CTCTGAGGCCGCCCTGCTGCAGAAGCTGGACATCAAGCCCTTCACTTACG GGCTGGTGATCGACAGCATCTACGACAACGGGTCCTTGTTCGACGCCAAG GTGCTGGACCTGACGGACGCCGATCTGCAGGCCAAGTTCATGGCCGCCGT GTCCAAGCTGGCCTCGGTCTGCCTGGAGATTGGCTACCCCACGCTGGCCT CCATGCCGCACTCCATCGCCAACGCCTTCAAGAAGCTGGTGGCCGTGGCC GTGGAGTGCGAGACCTTCTCCTTCGAGAAGGCGGAGCCCTACAAGGCCTA CTTGGCGGACCCCTCGGCCTTCGCCGCGGCGGCCGCGCCCGCCGGCGGCG GCGGCGGCGGGGACGCCCCGCCGGCGAAGAAGGAGGAGGAGGAAGAGGAG GAGGCGGACGTGGGCGCCGGCGACATGTTTGGCGGCAGCGACTACTAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig10:5439206..5440153-

>mRNA_H-akashiwo_Contig10.121.1 ID=mRNA_H-akashiwo_Contig10.121.1|Name=mRNA_H-akashiwo_Contig10.121.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=948bp|location=Sequence derived from alignment at H-akashiwo_Contig10:5439206..5440153- (Heterosigma akashiwo CCMP452)
ATGCCTTCTGAAAAAAAGATCGAGTACTTCTCCAGAATGGAGGGGATGAT
TGGAACCTACACCAAGTGTTTCATTGTCGGCGTTGACAACGTGGGTTCCC
ACCAGATGCAGCAAATCCGTTTGGCTCTGCATGGCGAGGCTGAGGTGCTC
ATGGGCAAGAACACCATGATGAGAAAGGTCATTGCCGAATTCATGAACAA
GAACCCTGGTTACCCTTTCGAGCAGATCTCCACGAAGCTGCGTGGCAACG
TGGGCCTCGTGTTCACCAACGGCGATCTCGGCGAGGTGCGCACCAAGATC
GAGGAGAATAGAGTGCCGGCCCCTGCTCGTGTCGGTTCCATTGCCCCTGT
CGAAGTCATCGTACCTCCCGGCCCCACCGGTTGCGACCCGGGCCAGACTT
CTTTCTTCCAGGTGCTGCAGATCGCCACCAAGATTTCCCGTGGTCAAATT
GAGATTGTCGCCCCCGTGTCCCTGCTGTCTGCTGGTGACAAGGTGGGCAA
CTCTGAGGCCGCCCTGCTGCAGAAGCTGGACATCAAGCCCTTCACTTACG
GGCTGGTGATCGACAGCATCTACGACAACGGGTCCTTGTTCGACGCCAAG
GTGCTGGACCTGACGGACGCCGATCTGCAGGCCAAGTTCATGGCCGCCGT
GTCCAAGCTGGCCTCGGTCTGCCTGGAGATTGGCTACCCCACGCTGGCCT
CCATGCCGCACTCCATCGCCAACGCCTTCAAGAAGCTGGTGGCCGTGGCC
GTGGAGTGCGAGACCTTCTCCTTCGAGAAGGCGGAGCCCTACAAGGCCTA
CTTGGCGGACCCCTCGGCCTTCGCCGCGGCGGCCGCGCCCGCCGGCGGCG
GCGGCGGCGGGGACGCCCCGCCGGCGAAGAAGGAGGAGGAGGAAGAGGAG
GAGGCGGACGTGGGCGCCGGCGACATGTTTGGCGGCAGCGACTACTAG
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