mRNA_H-akashiwo_Contig1.261.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: K0S767_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S767_THAOC) HSP 1 Score: 63.9 bits (154), Expect = 9.060e-11 Identity = 29/48 (60.42%), Postives = 40/48 (83.33%), Query Frame = 1
Query: 52 NKKKARDVHSTVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQ 195
++K + V + +KTMVVLGSGGHT+EM+RL+E+LD TRY PL +VVA+
Sbjct: 92 DEKCVQPVKTALKTMVVLGSGGHTTEMIRLVEQLDPTRYSPLVYVVAE 139
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: A0A1V9ZYE9_9STRA (40S ribosomal protein S19-3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYE9_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.710e-10 Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 19 LPFRTTGIRLVNKKKARDVHSTVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
LP R G K VH+T +T+VVLGSGGHT+EML+LI++L+ +YVPL FVVA T
Sbjct: 163 LPARVNG--RATKASNASVHTTYRTLVVLGSGGHTTEMLKLIKQLNVDKYVPLAFVVAAT 220
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: A0A250WTN2_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WTN2_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 3.810e-10 Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 46 LVNKKKARDVHSTVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
L+ K + +VKT+VVLGSGGHT+EM+RL+E LD+TRY P +VVA+T
Sbjct: 52 LLKFSKKLEKPDSVKTLVVLGSGGHTAEMMRLVESLDKTRYTPRAYVVAET 102
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: A0A3M6VIM2_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIM2_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.060e-9 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 49 VNKKKARDVHSTVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
+N KK +D V+ M VLGSGGHT+E+L+LI++L+ Y P+TFVVAQT
Sbjct: 49 LNSKKNKDKRYQVRVMAVLGSGGHTTELLKLIKRLNREVYTPITFVVAQT 98
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: A0A7S0RKA0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RKA0_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 1.360e-9 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 58 KKARDVHSTVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
K RD +KT+VVLGSGGHT+EML+++EKLD RY P T+V A T
Sbjct: 63 KPKRDPKKPLKTLVVLGSGGHTAEMLKVVEKLDRQRYTPRTYVAATT 109
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: A0A1V9YB24_9STRA (UDP-N-acetylglucosamine transferase subunit ALG14 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB24_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.780e-9 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 1 VRFAIALPFRTTGIRLVNKKKARDVHSTVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
VRF LP R G L K D + +T+VVLGSGGHT+EML+LI++L +RY PL FVVA T
Sbjct: 17 VRFWCILPARIRGT-LPRKTTPSD---SFRTLVVLGSGGHTTEMLKLIKRLQRSRYTPLAFVVAAT 78
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: A0A067C002_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C002_SAPPC) HSP 1 Score: 58.2 bits (139), Expect = 1.350e-8 Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 79 STVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
ST +T+VVLGSGGHT+EML LI++L TRY PL +VVA T
Sbjct: 41 STFRTLVVLGSGGHTTEMLALIKRLSPTRYAPLAYVVAAT 80
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: UPI0002658EB2 (UDP-N-acetylglucosamine transferase subunit ALG14 homolog n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658EB2) HSP 1 Score: 58.2 bits (139), Expect = 1.720e-8 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 34 TGIRLVNKKKARDVHSTVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
T +RL N K R+V K M+VLGSGGHTSEMLRLIE + + Y P +V A T
Sbjct: 51 TFMRLTNTKFKRNVKKPCKAMIVLGSGGHTSEMLRLIEGVSKLLYTPRIYVHADT 105
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: UPI0009952A50 (UDP-N-acetylglucosamine transferase subunit ALG14 homolog n=1 Tax=Pseudomyrmex gracilis TaxID=219809 RepID=UPI0009952A50) HSP 1 Score: 57.8 bits (138), Expect = 1.760e-8 Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 49 VNKKKARDVHSTVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
+ + K R+ S+VKTM++LGSGGHT+EMLR++++L+ Y P +V AQT
Sbjct: 28 MKRHKPREKSSSVKTMIILGSGGHTAEMLRIVQRLNVKNYSPRVYVHAQT 77
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Match: A0A6G0XIK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIK9_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 1.880e-8 Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 1
Query: 82 TVKTMVVLGSGGHTSEMLRLIEKLDETRYVPLTFVVAQT 198
+V+T+VVLGSGGHT+EML+LI++L TRY P FVVA T
Sbjct: 42 SVRTLVVLGSGGHTTEMLKLIKRLSTTRYTPFAFVVAAT 80 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.261.1 >prot_H-akashiwo_Contig1.261.1 ID=prot_H-akashiwo_Contig1.261.1|Name=mRNA_H-akashiwo_Contig1.261.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=66bp VRFAIALPFRTTGIRLVNKKKARDVHSTVKTMVVLGSGGHTSEMLRLIEKback to top mRNA from alignment at H-akashiwo_Contig1:10701580..10702298+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.261.1 ID=mRNA_H-akashiwo_Contig1.261.1|Name=mRNA_H-akashiwo_Contig1.261.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=719bp|location=Sequence derived from alignment at H-akashiwo_Contig1:10701580..10702298+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:10701580..10702298+ >mRNA_H-akashiwo_Contig1.261.1 ID=mRNA_H-akashiwo_Contig1.261.1|Name=mRNA_H-akashiwo_Contig1.261.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=198bp|location=Sequence derived from alignment at H-akashiwo_Contig1:10701580..10702298+ (Heterosigma akashiwo CCMP452)back to top |