Homology
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
A0A7S0SFR9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SFR9_9CHLO)
HSP 1 Score: 87.4 bits (215), Expect = 1.390e-20
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 3
Query: 51 GVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPH--IPVCFVEV 227
G+ P LL+RQYRMHP +A+FPSA FY ++SSDP P+ RPLPAG++WP P +P+ FVEV
Sbjct: 37 GLKPDLLDRQYRMHPALAQFPSAAFYGGRVSSDPTPQSRPLPAGLDWPSPRGAVPLAFVEV 97
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
A0A388MAV3_CHABU (DRBM domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MAV3_CHABU)
HSP 1 Score: 89.7 bits (221), Expect = 4.690e-19
Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 3
Query: 36 RAWSSGVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQD--EEKGG 248
R G+ P LN QYRMHPKIAEFPS FY+ +L+S P+P DRP+P G WP P P+ F++ D EE GG
Sbjct: 1412 RLQQCGIEPAFLNLQYRMHPKIAEFPSRVFYSGRLTSQPRPSDRPVPKGFPWPVPQHPIAFIDCLDAVEESGG 1484
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
A0A835Z7U9_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U9_9STRA)
HSP 1 Score: 88.2 bits (217), Expect = 6.750e-19
Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 3
Query: 33 SRAWSSGVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQDEEKG 245
+R +GVAPV+L RQYRMHP+IA FP A FY +L+S P+ DRP P G WP +PV FV V+D+ G
Sbjct: 90 ARLMLAGVAPVVLARQYRMHPRIAAFPGARFYGGRLASAPRAVDRPTPRGFPWPNAAVPVAFVAVRDDSDG 160
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
A0A7J7Q8H8_9CHLO (AAA domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q8H8_9CHLO)
HSP 1 Score: 84.7 bits (208), Expect = 2.650e-17
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 3
Query: 36 RAWSSGVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQDEE 239
R + G+AP+LL+ QYRMHP + +FPSA FY L S P+P++RPLP G+ WP P +PV F++ E
Sbjct: 626 RLQAMGLAPLLLDVQYRMHPALCQFPSAQFYGGLLRSWPQPQERPLPGGVAWPNPEVPVMFIQCNGPE 693
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
A0A7S0MPY6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MPY6_9CRYP)
HSP 1 Score: 80.1 bits (196), Expect = 3.230e-17
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 3
Query: 33 SRAWSSGVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPV 212
+R ++GV P +L QYRMHP +A+FPSA FYA +L S P P DRPLP G +WPRP PV
Sbjct: 93 ARLVAAGVRPQVLEDQYRMHPALADFPSAAFYAGRLRSVPAPADRPLPPGFDWPRPDTPV 152
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
A0A096P7D5_OSTTA (p-loop containing nucleoside triphosphate hydrolase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P7D5_OSTTA)
HSP 1 Score: 84.3 bits (207), Expect = 3.600e-17
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 3
Query: 51 GVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQDEE 239
GV LL+ QYRMHP IAEFPS FY+ K+ S P P+DRP+ G+ WP+P++PV F+E+ D E
Sbjct: 597 GVKVSLLDLQYRMHPLIAEFPSQAFYSGKVGSAPTPQDRPIVPGVAWPKPNVPVVFLEINDAE 659
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
A0A383VGU0_TETOB (Uncharacterized protein n=3 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VGU0_TETOB)
HSP 1 Score: 82.8 bits (203), Expect = 1.260e-16
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 3
Query: 36 RAWSSGVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQDEE 239
R + G+ P+LL+ QYRMHP + +FPS FY L S P+P+DRPLP GI WP P +PV F++ E
Sbjct: 706 RLQAMGLPPLLLDVQYRMHPALCDFPSQQFYGGLLRSWPQPQDRPLPGGIAWPNPEVPVMFIQCNGPE 773
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)
HSP 1 Score: 82.4 bits (202), Expect = 1.710e-16
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 3
Query: 33 SRAWSSGVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQDEEKGG 248
SR +G+ P+LLNRQYRMHP I++FPS HFY ++++ + DRP PAG WP PV FV V E GG
Sbjct: 517 SRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVS--ESGG 586
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
A0A835WVN2_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WVN2_9CHLO)
HSP 1 Score: 82.4 bits (202), Expect = 1.740e-16
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 3
Query: 36 RAWSSGVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQ--DEEKGG 248
R S GVAP+LL+ QYRMHP I+ FPSA+FY KL D+PLP G WP+P +P+ VEV+ EE G
Sbjct: 1131 RVASGGVAPLLLDTQYRMHPLISAFPSAYFYGGKLKDGVAAADKPLPKGFAWPKPGVPLALVEVRGGQEETSG 1203
BLAST of mRNA_H-akashiwo_Contig1.258.1 vs. uniprot
Match:
I0YTR4_COCSC (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YTR4_COCSC)
HSP 1 Score: 82.0 bits (201), Expect = 1.920e-16
Identity = 37/65 (56.92%), Postives = 43/65 (66.15%), Query Frame = 3
Query: 36 RAWSSGVAPVLLNRQYRMHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQ 230
R SG+ PVLL+ QYRMHP IAEFPSA FY KL + E+RPLP G+ WP P PV VE +
Sbjct: 220 RLQESGLGPVLLDMQYRMHPLIAEFPSARFYQGKLKTGISAEERPLPQGLAWPNPGCPVMMVECE 284
The following BLAST results are available for this feature:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.258.1
>prot_H-akashiwo_Contig1.258.1 ID=prot_H-akashiwo_Contig1.258.1|Name=mRNA_H-akashiwo_Contig1.258.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=56bp
MHPKIAEFPSAHFYANKLSSDPKPEDRPLPAGIEWPRPHIPVCFVEVQDE
EKGGFY
back to topmRNA from alignment at H-akashiwo_Contig1:10326347..10341162-
Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1.258.1 ID=mRNA_H-akashiwo_Contig1.258.1|Name=mRNA_H-akashiwo_Contig1.258.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=14816bp|location=Sequence derived from alignment at H-akashiwo_Contig1:10326347..10341162- (Heterosigma akashiwo CCMP452)
CGCGGGGCGGGGCGGGCTCGGCCTGAGCCTCTTCTCGCGCCTGGTCCTCG
GGCGTCGCGCCCGTGCTGCTCAACCGGTGCCTGCCCCCCCTGCTGGCCGG
GGCGCAGCGCGCAGCAACGATGCGCTGGCAGCGGTGGCAACGTCGCCAGC
GTCCGCCCTCCGCCCCCGCCCGCGCCGCCGCCGCCGCCCCGCCGCGGCCT
GCCCAAAGACACCGCCCGGCCCCCGGCCGCACACCTTGGGGGTGGGGGGC
AGAAGAGATCCAGGCGTGCAGTGTCCTGCTGGGCGCTAGTTCGCAGCTGA
CTTGATACTGCAGGCATTGTCTTCACCATATGGTGCAATTAAGGAAGGCC
TATGTTTGAAGGTACCCCCCAGTATCTCGGCAAAGAAAGCTTGTATGAAA
AGAAAAATGTGAGTTCTTGACACCTTGAGACATATAGAGAAAGGTACTAG
AACGTTTTTGGTGGGGATTGGCGATATTTGATGCCCACCCTAGACGATGG
CTGCTGTTGAACCAGTTCATTATGCATCAATCGCCAAAAGCGGCCTATCT
TTGCATGGAAATGCAACTTACCAGCGCAAATATGACTTATATTACATGTT
TCGATTGTATATTATTTATATTGACCACATTTTACCTGCGTTGATCCTTC
TTTGTCCGTCAAAAGTAATTGCATGCATTGCTGATAGGCCGCCGAATTTT
TCTTTTATTTCATTAAAAATGGAAAAGGGACACCAAGGAGAGCCACATCA
AACAGTGAACCAAAACCATTCTGGGGCGAAGGTGGAAAAAACCTCTGGTG
GTGGTGTTGTCGTAGCCACTTCATCAAATTCTTCTCGTGGTTCAGTCGTG
ATCCTATTCGCCCAACTTCTTCCACTTCTTATACTGTTTTATGTTTTTTT
TTTTCCATGAATGTGGAAGAAGAAGAAATAGGGTAATTTCGTGTTTTAAA
ATTGCGGGTTACGGAAATTAAAAATCGGTCAAACCACCACAACCACCCCC
CAAAATGGGTGAAACTTCTTTGAATTTTAACTCAAATGGTCCGTCGCAAA
TCAAAAAACTGACCACACTTTTTACTACCTCATTTTTTGCGTAGAATCCA
GTAAAATAGTCCACTGACCGTGATTTTTCTTGAGGGGTGATTTTTCGGCT
ACCCCCGGCAGGGGGGTCCGGGGGGGTCGGCCAAAAGCTAGGGGGGGGAA
AAAATCACATCCAATGGATATTTTTTTTGGAAACTACTAACAAAACAACC
CAGTGCAAAGTGTCATCGGTTTTTCGATTTGCGACGGACCATTTGAGTTA
CAGCCAGAAAACCTTCAAACATAGGCCTCCCTTAATTGCACCATAGGTTC
CTCACGACGGCAATTTTATCACCATTACTTAAGCTGGTTATGGAATGTGA
AGGTTTTATTGTGTATATATAATGAAATCATGCGGACGAATCAGTGAATA
AAACAAAGGAGCAAAGAAGAAGGGAAGTTTTTGAAAGGTCCATTCAGGAC
ATTTTCACAATCAAAAAATGATGTTCTTGGTCATACCACATTCCTTCACC
TTGAACAACTTCAGATGATGGACAAAATGAATTTTCACCCATAACAAATA
CAAATGTCGACAGGAGGAACAACGCTTTCTGACTGCGAAAGAAGATAATG
CCCCTGTTTTTTTATAATCAATGGCATTACACTTGATCATTGATTTGAAC
AGGGTATGGAGGGTTTCTGAAGACTTCAAGCGTTCGTTTTAGATGTATCA
TGACATGAATCAATGCAAAACTAAAAAAGAACGGGCTCGATCGGTTGGAA
ACTGCTTGCAATCCTTCATTTAGTATTTTTGCGAGCGAAACAGAGAAAGT
AAGAACAGCTTCGAAGCTTGCTTTCCATGGCGTTTCATCCAGAGAAAATT
GCAGAGGAGAAATAACATGTACCAATATTGAACATAGTTTGATTTGACTC
GGTTTCGTCAGGTTTCAGTCTTGCTTTGCTCAGCTTTCCTGCAAGTCCCA
ATGCTTTCATTTTGCGGCAAGAAAGCGGCGGCAGAACTTCAGCTGCAGAG
TATGTGCTACTACTAATTTGCAAGTAGTCTGTTTTTTAAGATGGGGGTAA
ATTATGCTGAAAACAGTTTTAATTGCTTTTCGGATGGTTAGAAAAACTTC
ATCAGGTCAAAATATATTATTGGCGTGGTGATGCCTAAAAATCTAAAACC
TAAACCTAATTATCACCATTTGGTGATCTTTTTGAGGCTGCAAAAATTGG
ATTTTATCAAACTTTTCGATCATATCTGAACATACTGAAGTGATTTATTT
AACAAAACGTTCACAGCATATTTCAAGATAGCCGAGTTCATTTAGATCGA
ACTTTTCATTTTTCAAATACTTTCATTATCATGAAGGCTTCGGCTTGTTC
GATTCTTGTGGTGTTGCTCTATTGATTCTAATGGTTTTGTGGTTGTCCAT
TTTACTGTTAGGTGAGCTTGTTGAAGTTCCTTTTCATTTGAACATGAGTC
TGATTGGGCGGATTTGACCGCGATGTTCGGTTTTGCCCCTTGAAATCAGT
GGTATGAAACGTATCATCTGCATTTTTGCGCTCCGCGAAACGTAAAACAA
CAACCAAAGAAAAACTGCAATACTTTTCCTCCACCACTCTTAAAAAAAAA
AAAAAAAAATCAGGTATTTTACTTTTTTAAAATACAATTTGATGTCATGG
ATCAGTTAAATTTTTGCTGTGGATACGTTAGCTACTAGGATGGAAACGAT
TCAATAGTAATGCCATTTCTGCTGGATCAGCCAGGGATCAGACGCCGTTT
CTGAAGGAACGAAACGTGGAGCACCTGATATTATTTGCTACAATCCACGA
AGGCCCTTGGGCCCAGGGCTGACCAAGATATGGCGGCAATCGAACGTGGA
GCGCTGGAGCGCATAGGGGGGGAGCAGGTCCTTGGTCCGCGATCGTCATT
CGATACTCAGAGCTATACAGTTCAATACAATAATGTTTTATAGAAACAAT
TGTGGTGGTTTTTGCCATTTTCGGAATTTTCCGGGGGTTTTATCCATACT
ACGACGGAACTATCCAAATACGATCGCGCTTTATTGAATCGATCAAAGTA
CTTCCCAAAAAGGGCCAAAAAGTCACGCATGTTAAAAACCGGCGATCATA
AAGTTTTACAAGGTTCCGGCTATACTATTATTTCATTTTCTAATTTTGAT
GACGAAATTATTTGATTCATTCAGAAATATGTAGGCTTTATTTTGAGTTT
TTCAACCCCCAAAATTATTAACTCTTATTAATGACCTAGCCCTCAAAGCT
ACTCTAGAGCAGCCCAAACTTTCAATTTTGATTGGAAATTTTCAAATCAT
CATTAAATTTCCGAATCACTATAGGCCGAAACTTACCGAAAACTCCAAGA
CAAAAGATGGGCTGCTCTGAGCAGCCCAAACGATTTTTCAGGTTTTGGCC
TTTTTTCGCTTACTTGGTTATACGTTCTCCTGATGTATAGGGGGTTACTA
CCTCTTATTCTGCGCATGTGAACTTTTTGGAAACAGAGGTAGGTGAACAC
CCACCTTTTATTGTTTTTCGGACAATTTTGGAGTGCTCGTCTTTTCTTTT
GTAAGAGGCTCCATGATCCTTTAGTCTTCATCCTCTTCTCTGCTCCAGAT
AGTCTAAACGGTTGAATTTTCAATTGTTTATTCAAAGAGGATCTTGCCTG
CAATCATAGAGGTATAAAAGACTTTCAAATAGTGTAATGGTGACCAATGA
AAAGTGAATACGGGCAGCTCCGTTCCGATGCTGCCAGAACATTCCGTTGT
TGAAGATATCATGGATGGTACGCTTGACGACGACATATACAATGATTACA
TGAAAATTCATCTACGGGAAATAAATGGGTTTTGAAAGCCAAAAGAATTA
TTCCAAACAGAACAGAGGAACTTTGTAAGGAAAGAGATACAGATAAAACG
CTTTATCTGATTCAATACATCAATATATATTAAGTTCTAGATATCAAAAT
TTCGGTTAATTCTGGATATTTGGATACATAACGCTGATTAGTATATATAC
AATACTTAAGCGTTACACATTTGACCAATGAAACTCAGATTCGGATTCGG
ATCAATGCAAAATACGGCCTAGTCATAGTTCAATTAAGTTGGGCTGCTCT
CGAGCAGCTTCTGGAAATTTAGGCCATAAAGAGTTAATTACCTCGGATAA
TCGCCATTTTCCTTGTAATTTTCATATTTTAAAAGAAAACCATTTACAGA
TGAAAATTCGGAGGACAACGACAACGGCAACGACAATGAAGACAAAGACG
ACATATAGGTATTACACGATGGCAGCAGCCCCAAAAAGCTATTCATTGGC
GACATTCAAAATGAGACTGATCGACGAATACCACCAGACTATGCATGGGT
CTGCAGTCGGCCTTTTATTACCAGGATCTGCAGCCGGCCTTCTATTGAAT
GGATCTTCTCTTCCCTGGATATGGGGGAGGCCTTCTAAAATATGGAAATT
TTGACATAGCCAGCCCCAGAAATGGCTCATATAAGGCCTCACCGGCCTTC
TATTGTACCTCTGGTCTTTAATTATGTGGAACATGATATCTCTTTTCTTC
TTGAGAAAAAGAACAATTTTAGCTTGAAACGCTCGTTAGGGAGCTCCTTA
ACCACCTAGTTTTTATTCCAGGGGTACATTATATACGGCTTGATATTTCA
TCTTGGGATTTTGAAAAATACTTAGAAAATTTTCCCCGACTGAACGTCTT
GATGGGCCAATTGAACCGTCCAGGCGGAAACCCCCGCGTGGGCGGGGAAA
ACCCTGCAGGGGCGGAAAAACTTTCCGAGCGGGCAGCAATTTTATTGTGC
GGGCGGAAAATCCCCGCACCTGCGGGAAATGGCCCCGCACGGGCGGAAAA
GGGGGACCACGCGAGGGATCTGGGGGGGACTTGATGACTTGGGGGGTCGA
AATCGCGGGAAAATTGACAATGTCATTAATGTATGAGCCACATGCAAAAA
ACAAGCAGAGGCACCAACCCAACGGCAAGCGAGAAGAGCAGCACTGAACT
TGATTTGTCCTGGATCAGCAAATAAAGAAAGATTTGATCTTTGCCAACGA
GCCAACCAGTGCTGGTGGCCAACGAGAACGCACTTTGTAAAAAAGACTGA
ACAGATTATAGTGAGAGCCAGCCAGCCAGCGAATCAAATTAATCCAAATG
TAAAGCACCAAGGTTGTGACCTTGCAAGGGGTGTTCCACCAGCTCATCAT
GTCGCCGGATATCCCGAAGAACGAAATGCCATGCACTTTTTTAGCCAGCT
GCACCGGTAACGCGAGTCGCCTCTGTTTGAATTTGATAGTCATGAAGAGC
CATCAACTCTGTTTGAATTTGATTGATCAGAACATCCATCAGGGCATTGG
ATTTTCCAGAAGAAAAACGTTGGCCCAGTCTAATGCTTTGCTTTTGTTTG
TATATAATTTAAATTGTCTCCATCGCTGCCTTCCGCCCTACAGACCTGGC
CTGAGGCTGGGATTGCTGCTCCAATACGGGAGCAGCTAGGGTTTCATTGT
ATGTGGTGACTCTGGTTAATTCAATATTTATACATATGATGGTTTATTAT
TATATGTTAGAAAAGCTAGAGTGATTCCACCTTTTTCTTCTTATTACTGG
TGCACGGCTTCCTCCTTGCGGCTGCACCAGAACACAGATCATATCTGCGG
CCACCACCACCAGTAATATCTGTCCTTTTTTTGTCTGTGCTATTCATTAT
ACAATGCCACCCTCCACTACACGTTGTCACACGTCACACTTCACTGTCAT
TGTACATATAGCCAAATTCTGGCAACTCATCGGAGCAGTTCCTCGGTATG
TAAGTGACCTTGGCTACTCCTACAATCTTTGACTATTGGGCGATGTTTCA
GTGATTCATGGCGTTGTCTTACTTCCAGCACTCCAGGCTTTTCTTCTTCA
GGACTCTCTCTCTTGCAGCCTCTCCATCTCAACAGGTGGTAAAAAAAAAA
AAAAAATGCCAGCAGGCCAATGACGAGAGGTGCTGCGCAGCACCACATTC
AAGCCACTTCCGCCCCATCTCAAAGCTCCATTCTAGTAACTTCAGCAGTC
CACTGAACCGTTTCAGTCCCCACTCCTAAAGTCTTAACTGTCGCCCCACC
ACCTGACAGTGGTGGGCATGCTCGCACTGATGTAATTGTATGCTGATGGG
AATGGTAGGCATCATCCTATCATATTAGCCAATCAAACAATGTGACCAAT
AATGTAGCCAACGCCCTGTCCTCATGAGTAACTTCACCAAAATCATGAGA
TAGTTGCTCTAGAACTTCGTCATCAATGCTGAATATCCACACAGCTATTA
TGTTTTCCGGGCTCTCGGTTATTGCAACGGATTGTAACAACACTCGAACC
GGGTCTTACTGTAACAAAATGTCCTTCTACGCGGATCACAACAACGATTG
ATATAAAATTTTTAATAGTATTTTGTACTATAGGCTGAATTTGAAGCTTC
TTTGCAAGAGAACGGTCAACTTGGGCAATTTGCTGGCTCCTAGGAGACCG
TCCACTGGTGGAATGCAGCAGAAGATTATTACTTACAAGGTATCTTGTAA
GCAGTGTGGGGTTAGTTATGTTGGTCAGACCAAAAGAACACTAGCCACAC
GGGTGAACGAGCATAGCCGGGCGGTGGATGCAGCCAAGACTTCCTTGTTT
GTTGACAGAAAAGGAAAGAACGACACGGGTTTGCCTGCTCACTGCTTGGA
CACTGATTTCTCTCATGGATTTGACTTTGACAATGCTGAGGTGCTGTGCA
GAGAGACCCACTGGGGTAAAAGGTTGAAGAAGGAGGCCATGTATATTGCA
ATGGTGGAGAACACTTGCAATATCCAGAAGGGCAGAGATTTGAACCCTGT
CTGGCTCCCTCTGCTGCGGCATTTTTCATAGACGGTTTCTTGGTCCAGGG
ACGGGGACTGCGTGGTGGTTGGTTTTTTCGTTGTGCCGTGATCGCGGAAA
GGATGTTATTTCGTGATGGCCGCTGCCACGTCTGTTTTTTCATCTCTCGG
TTTTTTCAACATGCAGTTTGCCATTTTTCAGATTAATTGTTTCTGCCGTT
TTATGGTTTTTTGACTCGCTGAATTTTTGCTCTGGTGCTTTGATTGGGTA
TATATATTTCTTCAACCGTTCTTTTTTCTTCTTTCTTTGTGCTGATGCTC
TGACAGGTCCCTCTTTCATTTCTTCGGAGATGAGACTTCTTCTGAGAGAG
CTTTGTGATCTTACCTGATGAAGAGGAAACCCGAAACGTCGTAACCTTTG
ACAGACTGTGATAATGTTGGACCAGTTGAATGTGAATTACCCAAGATATG
TTTGATTTCGTATCCATTTCATTCACTACTGGTACACAATCGATCTCTTT
ACATTCCGACTCAGGAGTATGGCATCGATCTAGTATTTCCCAAAAAGTCA
CACTTCTTAGAAAACGCTGATCTTATCATATCAACAAAGACAATAACAGC
ACAATTCACTGACGATCACAGTCATACATATAATACATACATATATATTG
CGGTTGTTTTCCGATGACGATATTAATACATACATAGTATGTTTTTTCAT
CTTGGGACTCAAAAAATATCACCAGCGCGCAAAAAACTTCGAACCACGAT
CACTTTGTGTGTGCATTGTCATGCGTTTCACAAAAAATACACACATACTG
ACCTGTCCGCACACACGAAGTGATTGTGGTTCGGAGTTATTTGCGCGCTT
CGTTTTTTCGGGAGCTCTTCATCCCGACTTTTTTTCGGTGGCGGATGTCA
AAATTTCCCTTTCTTTTTTACGCTCCCATGCCTCGTCACATCATGAGGAA
GGTCCTCTACTCCAGCCGACCGTCATGCTGAGCCATCTCTGAGCTTGTCA
ATTTGAACCTTGTAGTGTTGGCGCTCGTATCATTGCCCCTTCCACTTTTT
CGCGAACATCTCTTTGATGTATTTCGGGCCACCATCCTTCGCTGACGACC
TCCTTCTGTTACCGCTCTGTCAGGTCGTTGTACCCTTCCGTAAGTCGCCC
ACTCCTGGAAGATCCGGCGCTGTATCTCCAATCCACGTCATTCTTCCAGA
TCACCATTGTATCCAATCCTTGCCCTCCTCTTACTACCGAAATCCGATGA
TTGGGCCCATGGTTCAAGCTTTTCGAAGCATTGGCTAGGCGGGCATTCGA
TTACCAAACTTCGAATGCTGGATTCGAACCTTGGGCAGGGGCTTCTTCGC
GCCGCTAGCTTGCCTCGTTAACCGCTCGACCACTAGAATAGAAGGCCGGT
AAGGCCTTAAATATCGCTCGCCCAGACGAGGCGCCTTGTCTTCACCCACT
TTTCAATAAAGATTAGATTGTAAATCATCTCCGACATCTAGAATGCCCGG
TCTTTAATTATATACGGAATACAATACAATACGTTGTTTTATTTGGCATC
GTCCGTTCACACAGAACAACACAGCAGTTGGTTTGTTGTTGGCAACCCGC
ACGCAAACAAACCTGATGATGACTGATGATGATGTGTGGCTGATGACAAC
CACCCAAATAACAGCTGCTCTGCTGCTGACCTGGCAATGGCAACACCAAC
ATCATTGTTGTGTGTTGCCCCACGTGCTGTGCACCTTTCCCTTTCCTATC
ATTCCCACTCATTGTACACTAACCACATTAAAAGATCTATTTCTCCTCTT
TGGGGGCTGGCCCTCGTGTGCTGGCCCCCTAGCCTCCAGCTGGGCTGCCT
TTGACTGTTCACTATGAACAACGCAATACAAGGATACATGTGCTGTGAAA
AGTCCCATCTACATATCATGTGGTCGGATTTTGAATGGAAATACAATACA
TTTTTTGGACAGGAACAAGTTCCCCAATCTCCAGATTTCGATTCCAAAAT
GCTGAAAATGAAAAAAGCAGGAATTCGGTCAGTTTGTTTTGTTATCGAAA
GAACGAAGTCACCATCATCATCTCCCCCACCCCCTCTCCAGATTTCGATT
CCAAAATGCTGAAAATGAAAACAACCGGGAATTCGGTCAGTTTGTTTTTG
TTATCGATAGAACGAAGTCACCATCATCATCTCCCTCACCCCCCCGCCAA
GTCATCGCGAAGTCATCACCTCTTGGACCCGATCATCACGTTGAGACCCC
CCCCAAGTCATCATTTCACGACCCCCTAAATGGTGACGTCATTAACATTA
ATGTTTGACCCCATGATTGTCAACTTTGGCAACGGTTTGTGCTTCTAGCA
GTGGAAGGAGGAGGGTCTCCACTTCGAGTGGTGTTTCTGAGAGTGCTGAT
GATGTTGTTGATTGTTTGTAGTAGTAGTAATTTAGCTGCTGGTAGTATAG
TTGGCTTCTACACATTCCCACTTACATTTTGAACAACAGTAGTACTGACG
ATAATTTTTTTTTAGATTTCATGTGCTATAGCAGGAATTTTGCCTTGGCC
TTAAAGCTTTGATGGTGTCCGTGAATTATTTGACTGGGCCAACGTCTTCC
TTTTGGAAAATTCCATGCCCTGATGGATGGTCTTATTAATCAGTTAATCA
TTGTCATATATGTTTGTTGAAACTGCGGTAAGTGCAGGGTTGATTAACAT
TGTGCCGGGGGGGTTGAATGTTTTCCATGATTAGAAAAGTGAGCACAAAG
TCATTAATGCTGCTGCCGGCAATGCCGGCAGTCCCAATACTGCTAGATCG
AAATATCCGAGCTGCTGCTGCTGCTGCTACTTCTGATGGGTAGAAGCCGA
TTCGCCACTACTTATTCTTCCATTACTCATTGGCTAGATACTTCTTCTGA
TTGGCTAACACAACCAGGCACATCATCATTAGTCACTCATAAATGACTGG
TAAAGACTGTCTCCCAGTATACCGTACCATCCATATCTGTACGAATACCA
CCAACAATGGTCATTAATCTTCTTTGTCCACTCCAATCAACCTCCGGGGA
GAGTTCCGCGCTGCGGCCCGCGGCAGCGCCCACTCCGTCGGTCACCATCT
ATAATGTGCTCGCGCAACATATTTATCATCCTGCCACCTTGTACGCGGTA
TATGGTGGGAGAAGAAAGAAAGGTCTGTGGGGAGGATGTGAGATGTGGCA
GTGCGCGAACAAACAACGAAGTGTAGTATTTTGCCTACTAATATATGTAT
ATCTTGCGGTGAGAAGGCAGATTTTAGAGCTTCTTTATCAATGACCAGTT
ACCCCCCCATTATATATGTACTATACATTACACATATATACTGTATGCAC
TATGGGCCCTGACCTTTGAATCCTTGATAGTGGTCCGTGAAGCATTACTT
TTATCTATCTGCTGGTGAACACTTTATCTGACACTATCATGATATTCAGG
CAGTACAGGATGCACCCCAAAATAGCAGAGTTTCCTTCGGCTCATTTTTA
CGCCAACAAACTGAGCTCAGATCCCAAGCCTGAGGACCGGCCTTTGTGCG
TATTTTTTTTTGTACAAACAACATTAGTATGATGATTAAATGATGATGTT
AATTTTAGTTTCAAGTCTAGCATGTCTGGAGCACTACTATATCTCATTTT
CTTCCACTTTCTAGAGCACATTGTTGCTTTCTTCTTTTTAATATATATAT
ATACATATATTATTTATATATTAATTAAGTAAGTGTATTATCATGACGTG
TTGGGTTTAACAGAAAAGCCGCTTCCATCATCAGTGAGTATAGCTCCACA
TTGCTATAGATAGAGGTCATTGGTTTTTCGTACTCTGCCGTTTCTCGCTC
TCCTAGTCCACAAGACCCTCGGTGACACTCACTCCTTCTCTACACCGCCC
TTGTAGACCTTTTGCGCATCGCACTCAAGACCATCGTGGTTTCCCTCAAG
CACCCCTGTTTTCTGCATCCATAACACTGTTCCGGACTCATGACATCATT
AGTTCTTTCGGTTTGTTCCCTCTGGCTTTCGTGGTTTGGCACCATACATT
CTCAAGACCTATCGTGTTCCAGTCTGTCTGACGCATACTGTCGTTTGGAT
TCGCCACTCCTCATCAGAGATGTCTCATCAGCCGAGTTGTTCTGTTTGCC
TGCTTACCATTGGCTGCTGTTAGCTGTTGCTCCCTGATTGGTTCCTTGGT
CATGATGATTCACAAGTAGTAGTAGCTCATCATCATGACACCTACATCAT
TCATTTTGTGTTTGTTTGTTTTCTTCTTCTTCACATCATCATTCTTCTTC
TTCTTCTTTTCAAGAGCAGTTTGCTCATATTTGCTCGTCATAACTCCCAC
TGTTTCACAAAGCTGCTTAAGCTCAGACACATCTGTTGGTTATGGCCCAA
CTCTCCCTTGTATTCCTCTGAAACTTTAAAGACCACCCTGTGGATTTGAG
CGGCGCTATCGTTTTCTGCGCTCTTGTTGCAGCTCATGGAGTCCATCGCA
CGAGACGACGATAAATATGCTGCTGCTGTAAAAGATTTGATCTGAAGCAA
CGCTCCTTCTCACGAGCCACCCCGAGTGCAACTTTTTGCTCTTCGGCGGC
ATACTGGATTCTTTGCCCCCCACCTCGAGCATACAATATGGGTTGCTACT
CGCCCTGGACGGCTTGGTCTCTGTTTGGAACCCTGGCTACATTACTCTGG
TGTTGCTCCGTCTTACACGGCGAGCGATTTTGCCGAAGTCCCTGACTGTG
TTCACCTTCATCCTCATTACGATAATGGTGACGACTGCTATCAAAGCCCT
GTCTATGCCTACCTGGAATATGGAACTTTGATTCTGACTCTGATATTACG
TTGTGCCCCCTTCGTGGATGGACTTCTTTTTGCTGATATTGTGGATGAGC
TTCTTCTCTCTGCTGCTATGGTGCAGCTCCTCGGCACTGGTTTTGATGGT
CAAGTACCCCAGTGTATATCAGCACACGACTGTGATGCTAAGACCATGCT
AAGACTCATGGCTTTTCTCGACCCCTGTATATTGGTTCTACCAAACGGTC
CCTCCTCTGTTCTCAAAAGCGCTGCTATTCGCAATCTACTTTGAGCCCTG
ATGGCTCTGCTAATGACACTGCTTTGCCGCCTATTGGCTTTACTGGCTAT
ACGCTTTGTCGAGGTAATCCTCCTGCATCAACCCTGCTTTGCTGGCTGCT
GTCTGTAGTACTTTCCTACCCTGCTTTGCTGGCTGCTGGCTCTACTGAGT
TAAATTACAGCCTTGCTTTGATGCTTTCCAAGACTGATACATTCTTCAGC
AACCTTGTACCTAGCTTTGGGCTCTTCTGGTACTAGCCTTTTCCGAGCGT
CACGACGAGTTGGCGGAGCATTGGTTTTTCGTAGTCTGTCGTTTCTCGCT
CTCCTAGTCTACAAAACCCTCGGTGACACTCACTCCCTCTCTACACCGCC
CTTGTAGACCTTTTGCGCATCGCACTCAAGACCATCGTGGTCTTCCTCAA
GCACCCCTGTTTTCTGCATCCATAACACTGTTCCGGACTCATGACATCGT
TAGTTATTTGGTTTGTTCCCTCTGGCTTTCGTGGTTTGGCACCATACATT
CTCAAGACCTATCGTGTTCCAGTCTGTCTGACACATACTGTCGTTTGGAT
TCGCCACTCCTCATCAGAGATGTCTCATCAGCCGAGTTGTTCTGTTTGCC
TGCTTACCATTGGCTGCTGTTAGCTGTTGCTCCCTGATTGGTTCCTTGGT
CATGATGATTCACAAGTAGTAGTAGCTCATCATCATGACACCTACATCAT
TCATTTTGTGTTTGTTTGTTTTCTTCTTCTTCACATCATCATTCTTCTTC
TTCTTCTTTTCAAGAGCAGTTTGCTCATATTTGCTCGTCATAACTCCCAC
TGTTTCACAAAGCTGCTTAAGCTCAGACACATCTGTTGGAGGTAATATGT
CAAAAGTTTCTGAACTATTACAGAATCTGACGTGACAGCGTTTTTTTTTC
TGGAATACCACCAGCCGAGGCTTGGTGGCGGGCCTTCATCACCACGCACG
CCTTGTCAGTAATAATAATAATAAACCAAATGAAGATGGATAGTGGTATG
AGGAGGTGGAATTAAATATATGTAGTTCATTTCTTCATAATAACCTTTTT
AGTATGATAGTAATGATGATGTTAATTTTAGTTTCAAGTCTAACCTTTTT
TCAAACCGCTTTCGGGGCAGAACCTCTAGCTTCTATAAGCAGACCCTTCC
ACCTCTATCTGCCATTTCTTAATACCACTACCCAAAATCATCATAAGAAA
ACAAGTACAAATACCTTCAGTACCTCCCGACTGTACATCCATCATTGAAC
CCCTGTTGTTTACCCCCAACTAAGCCCTCCTACCCACTACCATATGGCTT
CTTAATCCCCAGCTGGGCCAACCACTCGTGCCAGAGACAGGACACATGAA
ACTGTGACCACCATGGGTTATCCATTTCAACAACTACGGCACTTTACAAG
GCGAGCCCATCCTCCAAGCAGCAGCCCCTCTCTGCGCTCCCCACGCCGGC
AGCAGACATGATATCCCCCAGTTGGGCACTTTTTAATTCGCCTGGTAGGG
TCTTGATGATGCCACACTTCCCACAAGCGATATCCATCTACAAGTCGCCA
CTGCTAAGCCTGAGTGTGGCCTGCAGTGGAGGGTGCTGCGCAACGCTCGC
CACACCTCCACTCACTCCAGCTGACTCCTCCCTGTCCAGTCCAAGCCCTC
TGCCCCCCCTTCCCCCCAACCTCTGCCCAGTGCCCCCCCTTCCTCTCATG
GCTCCACCGCCTCTTCCTCTACCGCCGAGCTGCCTTGCCCCTCCAGCTGC
CTTGTTGGCCTCTGCATCCCGGCGTTCCTTGGCCACCCTAGCCATTTCCT
GTTGAAGCACACGGTCCTCCTCTGCCTTCTTTTCCACCCGTGCCCTCACT
GTTTTCCTCTGCTTGTTGCGTTTTGCAATTCGACGGCGAGCCCGCCGTGG
AAGCGCTGGCTCAAAGTGGTCATCCCCCTTCTTATTACCCTCGGCGCCTT
CTGCCGTTGCTGGCCATGCAGCCCTGCCCCCCTGGGCTGCCACGCTTTTC
TCCTTGCTTGAACCTTCTTCAGAGCTACTGGAGTCCGTATCATCTCCACT
AATCAACGATTCCGCCTCGTCACTGCCATTTGACGGCCCTGTTGAAGAGC
CCACCACTTCAACTGGCCCTGTATTCAATAGTGGCGGCTCGACTAGAAGT
TCATGAGAAGCCCCAGGACGCATGACGACAGAAGCCGCCAGCCTCCCTGT
TCCACGCTCACTGATTGAGTCACCGATAAATCCTGATTTGTTTCTTGGCC
AATTGGCGCCCCCCGAGTTTTTCCCAGCTTCCAGAAACTCTCCCCCCCCC
TCTAGATGGTTTTCTTCCCCACCAATCGGAAACCCCTGCTGTGTAAAAGC
TACGTTGCGAACAATGACTTAACCTTTTTAGTATGTATATAATTCCACTG
CTACTTATTATTGGCAGTATGCTGTGTATATATAATATAGTAGTATTGCT
GCAGTACCTTTGGGTCAAAACACTCTCCAAAAAAGCTAAAACACTGAACT
CGTCTCTCGAAGACACTCCCCAACCCTAACCCTCACCCTAGAGTATATAT
ATACCACTTTCCCGTTCACAATTTGGTTTCACAAATCTTGCAACCCACCG
TTTCTTCTTGAAATGGTTTGCCATGCTCGCCTGCATATTTCCTGTAGTAC
TTCTCGTCGTTGTGCCACCCATGAGTGCATTTATTATATTTGTCTGTTGC
GTGGAAATCATGTTGTCGTTTTGTGTCTTTTCAGGCCTGCAGGGATCGAG
TGGCCTCGACCCCATATACCTGTATGCTTTGTTGAAGTCCAAGATGAAGA
GAAGGGAGGTTTTTAT
back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig1:10326347..10341162-
>mRNA_H-akashiwo_Contig1.258.1 ID=mRNA_H-akashiwo_Contig1.258.1|Name=mRNA_H-akashiwo_Contig1.258.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=168bp|location=Sequence derived from alignment at H-akashiwo_Contig1:10326347..10341162- (Heterosigma akashiwo CCMP452)
ATGCACCCCAAAATAGCAGAGTTTCCTTCGGCTCATTTTTACGCCAACAA
ACTGAGCTCAGATCCCAAGCCTGAGGACCGGCCTTTGCCTGCAGGGATCG
AGTGGCCTCGACCCCATATACCTGTATGCTTTGTTGAAGTCCAAGATGAA
GAGAAGGGAGGTTTTTAT
back to top