mRNA_H-akashiwo_Contig1.251.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: A0A7S2ULA9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULA9_9STRA) HSP 1 Score: 104 bits (260), Expect = 3.910e-26 Identity = 50/83 (60.24%), Postives = 67/83 (80.72%), Query Frame = 3
Query: 3 RMGFSIWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNPVGGNT----MKNQAVGLINAIQYLRVPLIAVNGLVIIFELILGG 239
+MGFSIWNLFK GLL TN++ ILHR RFL++YGLD++N +G + ++ QA+GL+ A+QYLRVP+I VN L I+FE+ILGG
Sbjct: 28 KMGFSIWNLFKVGLLLTNSILILHRRRFLARYGLDELNNMGCDPSQKPLQAQAIGLLQAVQYLRVPVIGVNMLTIVFEMILGG 110
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: K8ZAA6_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAA6_NANGC) HSP 1 Score: 97.1 bits (240), Expect = 1.620e-23 Identity = 44/78 (56.41%), Postives = 60/78 (76.92%), Query Frame = 3
Query: 6 MGFSIWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNPVGGNTMKNQAVGLINAIQYLRVPLIAVNGLVIIFELILGG 239
M F+IW+L+K+GLL TN VA+LHR RFL KYGLD +++NQ VGL+NA+QYL+VPLIA+N + ++ EL+ GG
Sbjct: 1 MAFTIWSLYKSGLLFTNGVAVLHRKRFLRKYGLDVAEVADTTSIRNQVVGLLNAVQYLKVPLIALNIVTVVIELLFGG 78
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: A0A7S2EBW0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBW0_TRICV) HSP 1 Score: 91.7 bits (226), Expect = 4.550e-21 Identity = 47/83 (56.63%), Postives = 63/83 (75.90%), Query Frame = 3
Query: 3 RMGFSIWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVN--PVGGNT--MKNQAVGLINAIQYLRVPLIAVNGLVIIFELILGG 239
+MGFS+WNLFKAGLL TN+V IL+R RFL+K+GLD V PV ++ QA+GL+ A+ YL+ P+I +N L IIFE++LGG
Sbjct: 23 KMGFSLWNLFKAGLLMTNSVMILNRRRFLAKHGLDDVTNMPVDPQQRPLQAQAIGLLQAVSYLKFPVICLNCLTIIFEMLLGG 105
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: A0A835YX81_9STRA (Yos1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX81_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.770e-20 Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = 3
Query: 15 SIWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNP-VGGNTMKNQAVGLINAIQYLRVPLIAVNGLVIIFELILGG 239
S+W+LFK GLL TNAVAILH+ RFL G + +P +G + +KNQA+GLINA+ YLR PLIA+N L FE++ GG
Sbjct: 3 SLWSLFKTGLLVTNAVAILHKERFLRPLGWAEPDPALGSSNLKNQAIGLINAVAYLRGPLIAINLLTCTFEMLFGG 78
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: A0A2D4BY06_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY06_PYTIN) HSP 1 Score: 87.4 bits (215), Expect = 9.060e-20 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 3
Query: 18 IWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNPVGGNTMKNQAVGLINAIQYLRVPLIAVNGLVIIFELILG 236
+W F + LL TNAV ILH RFL KYG D+V+P G T++NQ VG + A+QYLRVPLI VN L+I+ +L++G
Sbjct: 4 LWGFFLSSLLLTNAVCILHEKRFLRKYGWDKVDPSQGMTIRNQIVGFLVAVQYLRVPLIVVNALMILLQLVMG 76
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: A0A8K1FQA8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQA8_PYTOL) HSP 1 Score: 82.8 bits (203), Expect = 5.800e-18 Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 3
Query: 18 IWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNPVGGNTMKNQAVGLINAIQYLRVPLIAVNGLVIIFELILG 236
+W+ F + LL TNAV ILH RFL YG D+++ G T+KNQ VG + A+QYLRVPLI VN +I+ EL++G
Sbjct: 4 LWDFFLSSLLLTNAVCILHEKRFLRPYGWDKIDSSQGMTIKNQVVGFLVAVQYLRVPLIIVNAFMILLELVMG 76
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: A0A3F2RI45_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RI45_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 4.630e-17 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 3
Query: 18 IWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNPVGGNTMKNQAVGLINAIQYLRVPLIAVNGLVIIFELILG 236
+WN F LL TNAV ILH RFL +G D+V+ G T+KNQ VG + A+QYLR PL+ +N L+I+ EL++G
Sbjct: 4 LWNFFLTSLLLTNAVCILHEKRFLRSHGWDKVDSSQGMTIKNQIVGFLIAVQYLRFPLMVINTLMILLELVMG 76
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: K3WSH3_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSH3_GLOUD) HSP 1 Score: 79.7 bits (195), Expect = 9.250e-17 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 3
Query: 18 IWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNPVGGNTMKNQAVGLINAIQYLRVPLIAVNGLVIIFELILG 236
+WN LL TNAV ILH RFL YG +V G T+KNQ VG + A+QYLRVPLI +N +I+ EL++G
Sbjct: 4 LWNFVLTSLLLTNAVCILHEKRFLKPYGWHKVEASEGMTIKNQVVGFLVAVQYLRVPLIVINAFMIVLELVIG 76
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: D7FPN5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN5_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 4.100e-16 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 3
Query: 9 GFSI-WNLFKAGLLCTNAVAILHRGRFLSKYGLDQVN-PVGGNTMKNQAVGLINAIQYLRVPLIAVNGLVIIFELI 230
GF++ W LFKAGLL TNAV ILH+ RFL KY LD+V+ + MKNQ VGLI A+ YLR PLI +N L + ++
Sbjct: 4 GFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 79
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Match: A0A196SAT2_BLAHN (Yos1-like protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SAT2_BLAHN) HSP 1 Score: 77.0 bits (188), Expect = 1.070e-15 Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 3
Query: 15 SIWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNP-VGGNTMKNQAVGLINAIQYLRVPLIAVNGLVIIFELILG 236
S+WNL KA LL NA+AILH RFL KYG D V+ G N +KNQ + L+ A+++LRVPLI VN + I+ + I G
Sbjct: 3 SLWNLIKAVLLFVNALAILHEKRFLKKYGWDVVDASYGSNPIKNQCISLLQAVRWLRVPLIFVNFIFIVIDAITG 77 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.251.1 >prot_H-akashiwo_Contig1.251.1 ID=prot_H-akashiwo_Contig1.251.1|Name=mRNA_H-akashiwo_Contig1.251.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=79bp MGFSIWNLFKAGLLCTNAVAILHRGRFLSKYGLDQVNPVGGNTMKNQAVGback to top mRNA from alignment at H-akashiwo_Contig1:10185307..10186236- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.251.1 ID=mRNA_H-akashiwo_Contig1.251.1|Name=mRNA_H-akashiwo_Contig1.251.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=930bp|location=Sequence derived from alignment at H-akashiwo_Contig1:10185307..10186236- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:10185307..10186236- >mRNA_H-akashiwo_Contig1.251.1 ID=mRNA_H-akashiwo_Contig1.251.1|Name=mRNA_H-akashiwo_Contig1.251.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=237bp|location=Sequence derived from alignment at H-akashiwo_Contig1:10185307..10186236- (Heterosigma akashiwo CCMP452)back to top |