mRNA_H-akashiwo_Contig1.247.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: UPI0003FE0FB1 (homocysteine S-methyltransferase n=1 Tax=Paludibacterium yongneupense TaxID=400061 RepID=UPI0003FE0FB1) HSP 1 Score: 212 bits (539), Expect = 3.300e-64 Identity = 124/257 (48.25%), Postives = 167/257 (64.98%), Query Frame = 1
Query: 1 VVILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARAQTSGAPASGAGLHRWRPLVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVLGAFNREG 771
+V+LDG LATELE+ GC+L+ LWSA +L++ P++I QVH Y AGAD+ TT+SYQA+ +GF GLS A++L+++++ELA EAR + PA G R RPLVAASVG YGA +ADGSEY G YG ++ L ++H +L L+ AGPDLLA ET+PCLEE A+ LL P AW+S +C+DG L G L DAV A++ FD +V+AVGVNC P + +A+ R +TR L A+ G
Sbjct: 19 LVVLDGALATELESRGCDLNDPLWSARVLIEAPELIRQVHEDYFAAGADVATTASYQASFEGFARRGLSHDEARALMRRAIELACEARDRCWADPALRVG--RARPLVAASVGPYGAMLADGSEYRGHYGLSEEQ--LMDFHRPRLAALLAAGPDLLACETLPCLEEARALARLLT----EFPSARAWISFSCRDGEHLCQGERLADAVAALDGFD---QVIAVGVNCTAPEYIAPLLASART-ATRKPLLAYPNSG 263
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: UPI001C03CA5A (homocysteine S-methyltransferase n=1 Tax=Paludibacterium sp. B53371 TaxID=2806263 RepID=UPI001C03CA5A) HSP 1 Score: 209 bits (531), Expect = 5.270e-63 Identity = 119/250 (47.60%), Postives = 159/250 (63.60%), Query Frame = 1
Query: 1 VVILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARAQTSGAPASGAGLHRWRPLVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVL 750
V++LDG LATELEA GC+L+ LWSA +L++ P +I QVH Y AGAD+ TT+SYQAT +GF GL + A L++++VELA+EAR PA AG R +PLVAASVG YGA +ADGSEY G Y A L +H ++ EL+ AGPDLLA ETVPCL E A+ LL P AW+S +C+DG G LL D + A+E FD +V+AVG+NC P + + + + R +++ +L
Sbjct: 17 VMVLDGALATELEARGCDLNDPLWSARVLIEQPALIRQVHADYFSAGADVATTASYQATFEGFARRGLDHEAAAGLMRRAVELAREARDAFWAEPAHRAG--RLKPLVAASVGPYGAMLADGSEYRGDY--ALDEEGLMAFHRPRMAELLAAGPDLLACETVPCLSEARALARLLG----EFPQARAWISFSCRDGRHNSQGELLADCLAALEGFD---QVLAVGLNCTAPGFVPELLQSARSATSKPLL 255
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: A0A2K2DF86_BRADI (Hcy-binding domain-containing protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2DF86_BRADI) HSP 1 Score: 208 bits (529), Expect = 3.640e-62 Identity = 123/257 (47.86%), Postives = 165/257 (64.20%), Query Frame = 1
Query: 4 VILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARA----QTSGAPASGA---GLHRWRP-LVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVL 750
++LDG L TELEA G +L +LWSAS LV P II +VH YLEAGA+IITT+SYQAT++GF GLS +++++LL++SVE+A+EARA S P +G G RP LVAASVGSYGAY+ADGSEY G YGR+ L +H R+L+ L AGPDL+AFET+P E +A LL D R+P AW S KDG+ SG + + D+ RRV +VG+NC P L+ + ++R+ T+ ++
Sbjct: 25 LVLDGALGTELEAHGADLQDELWSASCLVSAPHIIRKVHLDYLEAGANIITTASYQATLQGFQSRGLSSEQSETLLRRSVEIAQEARAIFVEGRSKGPYAGRENDGSRERRPVLVAASVGSYGAYLADGSEYTGDYGRSVTKEALKNFHRRRLQVLADAGPDLIAFETIPNKLEAQAYSELLEENDIRIP---AWFSFTSKDGANAASGDPITECAAVA---DSCRRVASVGINCTAPGLIHGLILSIRKVYTKAIV 275
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: A0A4R7BAK5_9NEIS (Homocysteine S-methyltransferase n=1 Tax=Paludibacterium purpuratum TaxID=1144873 RepID=A0A4R7BAK5_9NEIS) HSP 1 Score: 206 bits (525), Expect = 5.000e-62 Identity = 122/247 (49.39%), Postives = 158/247 (63.97%), Query Frame = 1
Query: 1 VVILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARAQTSGAPASGAGLHRWRPLVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGP----ALLEQAVATVRR 729
VV+LDG LATEL A GC+L+ LWSA +L++ P++I QVH Y AGAD+ TT+SYQAT +GF GL+ ++A L+Q+SVELA+ AR PA G R RPLVAASVG YGA++ADGSEY G YG + A L ++H +L L+ AGPDLLA ET+PCL E A+ LL+ P AW+S +C+D + G L D + A+E F+ RVVAVG+NC P ALL A R+
Sbjct: 17 VVVLDGALATELAARGCDLNDPLWSARVLIEAPELIQQVHADYFAAGADVATTASYQATFEGFARRGLTHEQAIELMQRSVELARSARDAFWAEPAHREG--RLRPLVAASVGPYGAWLADGSEYRGHYGLDEAA--LMDFHRPRLAALLAAGPDLLACETLPCLAEARALARLLS----EFPSAYAWISFSCRDDAHNCQGEALADCLAALEGFE---RVVAVGINCTAPTFVPALLRSAARITRK 252
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: T5H8M0_BACLI (Homocysteine methyltransferase n=29 Tax=Bacillaceae TaxID=186817 RepID=T5H8M0_BACLI) HSP 1 Score: 206 bits (523), Expect = 8.410e-62 Identity = 113/250 (45.20%), Postives = 160/250 (64.00%), Query Frame = 1
Query: 1 VVILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARAQTSGAPASGAGLHRWRPLVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVL 750
V+ILDG +ATELE GC+L+ LWSA +L++NP++I QVH Y AGAD T+SYQ+T++GFT GLS Q A L+++SV LA EAR + AP + G R +P VAASVG YGA++ADGSEY G YG + LA++H R++ L++AG D+LA ET+PCL E +AIV LL P AW+S + KDG + G G+ + + D H +V AVGVNC + + +++H+ + ++
Sbjct: 14 VIILDGAMATELERYGCDLNDSLWSAKILIENPELIKQVHLDYFRAGADCAITASYQSTVEGFTKRGLSEQEALHLIRESVRLAAEARDEFWAAPENREG--RPKPFVAASVGPYGAFLADGSEYQGNYGVTEDE--LADFHRRRMGALIEAGADILACETIPCLSEAKAIVHLLK----EFPDTHAWISFSAKDGRHISDGTKAGECAKWL---DQHDQVAAVGVNCTRLEHVSSLIGGIKKHTAKPII 252
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: A0A2K3MXN1_TRIPR (Homocysteine S-methyltransferase 1-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MXN1_TRIPR) HSP 1 Score: 205 bits (521), Expect = 1.090e-61 Identity = 111/249 (44.58%), Postives = 156/249 (62.65%), Query Frame = 1
Query: 4 VILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARAQTSGAPASGAGLHRWRPLVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVL 750
V+ DGG AT LE G ++ LWSA L++ P +I QVH +YLEAGADI+ TSSYQATI GF GLS++ ++LLQ+SV+LA EAR + G R LVAAS+GSYGAY+ADGSEY G YG L ++H R+L+ LV+AGPDLLAFET+P E +A+V LL ++ ++P +W+ DG PSG + + I K + +V AVG+NC P +E ++ ++ + + ++
Sbjct: 20 VVTDGGFATHLETLGASINDPLWSAICLIKQPHLIKQVHLEYLEAGADILVTSSYQATIPGFLSKGLSIEEGEALLQRSVKLAVEARDSFGTSAKRNPGNKYRRALVAASIGSYGAYLADGSEYRGLYGPDVNLKKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQALVELLEEINVQIP---SWICFTSVDGENAPSGESFQECLEVINKCN---KVEAVGINCAPPHFMESLISKFKQLTKKAII 262
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: A0A6C0NZZ0_9BACL (Homocysteine S-methyltransferase n=1 Tax=Paenibacillus rhizovicinus TaxID=2704463 RepID=A0A6C0NZZ0_9BACL) HSP 1 Score: 204 bits (519), Expect = 3.080e-61 Identity = 113/254 (44.49%), Postives = 160/254 (62.99%), Query Frame = 1
Query: 1 VVILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARAQTSGAPASGAGLHRWRPLVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVLGAFN 762
V+ILDG +ATELE GC+L+ LWSA +L+ NP++I +VHT Y AGAD T+SYQAT++GF GL+ A +L+++SV +A EAR P + G R +P+VAASVG YGA++ADGSEY G Y + LA++H ++ L++AG D+LA ET+PCL E +AI+GLL P V AW+S + KD + SG + + + + DAH +V AVGVNC P + V + RH+ + V+ N
Sbjct: 13 VLILDGAMATELERHGCDLNDSLWSAKVLMDNPELIGRVHTDYFAAGADAAITASYQATVEGFRGRGLNEAEAVALIRRSVRIAVEARDAFWAEPGNRPG--RLKPIVAASVGPYGAFLADGSEYRGDYALTEEE--LADFHRERMRALIEAGADVLACETIPCLREAKAIIGLLEAEFPGVY---AWISFSAKDAQHISSGETIAECAQWL---DAHEQVAAVGVNCTPPQYINALVGEIGRHTAKPVIAYPN 256
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: A0A7J6HK27_CANSA (Hcy-binding domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6HK27_CANSA) HSP 1 Score: 204 bits (519), Expect = 4.730e-61 Identity = 111/249 (44.58%), Postives = 162/249 (65.06%), Query Frame = 1
Query: 7 ILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARAQTSGAPASGAGLHRW-RPLVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVL 750
++DGG AT+LE G +++ LWSA L+++P +I +VH +YLEAGADI+ TSSYQAT+ GF GLS++ +SLL++SVELA EAR + + G H + R LVAAS+GSYGAY+ADGSEY G+YG G L ++H ++L+ LV+AGPDLLAFET+P E +A V LL + ++P +W+ + DG PSG + + I K D +V AVG+NC P +E + + + + + ++
Sbjct: 21 VVDGGFATQLEKHGADINDPLWSALCLIKDPHLIKKVHKEYLEAGADILVTSSYQATLPGFVSRGLSIEEGESLLRRSVELALEARDSFWDSMKNKHGGHAYNRALVAASIGSYGAYLADGSEYSGSYGSNVGLDKLKDFHRKRLQILVEAGPDLLAFETIPNKLEAQACVELLEEENIKIP---SWICFSSVDGENAPSGESFKECLNVINKCD---KVKAVGINCAPPQFIEDLILKLNKLTDKAIV 263
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: J3L4J7_ORYBR (Hcy-binding domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=J3L4J7_ORYBR) HSP 1 Score: 205 bits (522), Expect = 4.790e-61 Identity = 119/261 (45.59%), Postives = 168/261 (64.37%), Query Frame = 1
Query: 7 ILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARA----QTSGAPASGAGLHRWRP---------LVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVL 750
++DGGLATELEA G +L +LWSA L+ P +I +VH YL+AGA+IIT++SYQATI+GF + GLS +R+++LL++SV +A+EARA +S P + G+H R LVAASVGSYGAY+ADGSEY G YGR+ L +H R+L+ L AGPDL+AFET+P E +A L+ D R+P AW+S +DG++ SG + + D+ RV AVGVNC P L+ V ++R+ +++ V+
Sbjct: 25 VVDGGLATELEAHGADLRDELWSARCLLSAPHLIRKVHLDYLDAGANIITSASYQATIQGFQERGLSRERSEALLRRSVHIAQEARAIFAEGSSKGPFATHGIHHHRSAASSARCPVLVAASVGSYGAYLADGSEYTGEYGRSVTKETLKSFHRRRLQVLADAGPDLIAFETIPNKLEAQAYAELMEEEDIRIP---AWLSFTSRDGASAASGDPIAECAAVA---DSCARVAAVGVNCTAPRLIHGLVLSIRKVTSKPVV 279
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Match: A0A1H0VNJ6_9BURK (Homocysteine S-methyltransferase n=2 Tax=Rhodoferax sp. OV413 TaxID=1855285 RepID=A0A1H0VNJ6_9BURK) HSP 1 Score: 204 bits (518), Expect = 8.360e-61 Identity = 120/250 (48.00%), Postives = 155/250 (62.00%), Query Frame = 1
Query: 1 VVILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIITTSSYQATIKGFTDMGLSLQRAQSLLQKSVELAKEARAQTSGAPASGAGLHRWRPLVAASVGSYGAYMADGSEYLGTYGRAKGAAFLAEWHARQLEELVQAGPDLLAFETVPCLEEVEAIVGLLNGVDPRVPLPPAWVSLACKDGSTLPSGALLGDAVRAIEKFDAHRRVVAVGVNCLGPALLEQAVATVRRHSTRVVL 750
+VILDG LATELE G +L+ LWSA LL++ P++I QVH Y AGAD+ TTSSYQAT + F G + L++ SV LA EAR PA AG R +P++AASVG YGA +ADGSEY G YG ++ A L ++H +L+ LV++G DLLA ET+PCL E AI LL P P AW+S +C+DG G LL D V A+E FD +VVAVGVNC P + V + H+ + +L
Sbjct: 28 LVILDGALATELERRGADLNDPLWSAKLLIERPELIRQVHLDYFTAGADVATTSSYQATFEAFAKRGFDHAASAQLMRDSVRLAVEARDAFWADPAQRAG--RKQPIIAASVGPYGAMLADGSEYRGHYGLSEEA--LMDFHRPRLQVLVESGADLLACETIPCLAEARAIARLL----PEFPGAAAWISFSCRDGLHTSQGELLADCVAALEGFD---QVVAVGVNCTAPEHIASLVDQMHAHTRKPIL 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.247.1 >prot_H-akashiwo_Contig1.247.1 ID=prot_H-akashiwo_Contig1.247.1|Name=mRNA_H-akashiwo_Contig1.247.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=257bp VVILDGGLATELEAAGCELDSKLWSASLLVQNPQIISQVHTKYLEAGADIback to top mRNA from alignment at H-akashiwo_Contig1:10064343..10065239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.247.1 ID=mRNA_H-akashiwo_Contig1.247.1|Name=mRNA_H-akashiwo_Contig1.247.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig1:10064343..10065239+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:10064343..10065239+ >mRNA_H-akashiwo_Contig1.247.1 ID=mRNA_H-akashiwo_Contig1.247.1|Name=mRNA_H-akashiwo_Contig1.247.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=771bp|location=Sequence derived from alignment at H-akashiwo_Contig1:10064343..10065239+ (Heterosigma akashiwo CCMP452)back to top |