mRNA_H-akashiwo_Contig1.236.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: A0A6V1N1N4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N1N4_HETAK) HSP 1 Score: 328 bits (840), Expect = 4.870e-112 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 3
Query: 75 MGFIHDTLCVHCARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMKATDAYNSNAGGIPVGF 578
MGFIHDTLCVHCARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMKATDAYNSNAGGIPVGF
Sbjct: 1 MGFIHDTLCVHCARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMKATDAYNSNAGGIPVGF 168
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: A0A7S2V157_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V157_9STRA) HSP 1 Score: 204 bits (519), Expect = 3.100e-63 Identity = 99/165 (60.00%), Postives = 126/165 (76.36%), Query Frame = 3
Query: 75 MGFIHDTLCVHCARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMKATDAYNSNAGGIP 569
MG HDTLC CA+N KTI YTW SLA VAI+FI ACVA S+IS EG N A+GFA ++TVLLM+ L +GG+ V++K++T LA+GFFLGVV+MMSQQCLI+FA+FAGRAG T SE AD +A FCF LF++YGFFA VL +FR DL++ DA +++ +P
Sbjct: 1 MGSFHDTLCGPCAKNARKTITYTWFTSLAFVAIAFIIACVATSRISAEGDNRALGFAAIWTVLLMVALGIGGSLVMKKFQTSLAIGFFLGVVIMMSQQCLILFAIFAGRAGATDSESESSADKGMASFCFFLFLIYGFFASVLGYFRKDLIRDADAMSADESQMP 165
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: A0A836CM66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM66_9STRA) HSP 1 Score: 163 bits (413), Expect = 3.960e-47 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = 3
Query: 84 IHDTLCVHCARNPDKTIQYTWLASLALVAISFICACVAASK---ISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMKATD 539
I D +C CARNP K I Y W S+ LVAI+F+CACVAASK + + ++ FA ++T LL+ILL +GG+ V+R+Y+T LAVGFFLGVV++MSQQ LI+FAVFAGRA TT SE AD+A A FCF LF+VY FA +LA FR D++ T+
Sbjct: 3 IRDNVCAPCARNPQKAIAYAWFTSIILVAIAFVCACVAASKQEGVDAVKGSKSLAFASIWTALLLILLCIGGSMVMRRYRTSLAVGFFLGVVIIMSQQMLILFAVFAGRAEDTTNDSEKPADSAFAAFCFFLFVVYTGFAIMLAMFRADIIADTN 157
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: A0A7R9UDC1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC1_9STRA) HSP 1 Score: 132 bits (332), Expect = 9.220e-35 Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = 3
Query: 66 SVKMGFIHDTLCVHCARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMK 530
S M +HD LC CA+NP ++I Y+WLA+L ++ +FI VAAS+I T + GFA ++TVL I +SVGGT+++R+ T +G LGVV MMS CLII A+FAGRA + S E AD AV+ F F LF+VY F+ +L FR++++
Sbjct: 1 SSSMEVVHDVLCGPCAKNPKRSITYSWLATLVIIFCAFIAGSVAASRIETNDTPRGYGFAIIWTVLSAIAVSVGGTYIMRRLSTAYYIGLLLGVVAMMSMLCLIISAIFAGRADIHNNSDE-DADIAVSIFLFFLFIVYAVFSFMLFVFRDEVIS 154
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: D7FUW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW1_ECTSI) HSP 1 Score: 126 bits (316), Expect = 5.850e-33 Identity = 75/144 (52.08%), Postives = 99/144 (68.75%), Query Frame = 3
Query: 162 LVAISFICACVAASKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDL-MKATDAYNSN-----AGGIPVG 575
+V ++FICAC +A+ +GS + +GFA V+TVLL+I LSVGG+ V+RKY+T LAVGFFLGVV++MSQ L++FAVFAGRA E AD A A FCF L++VY FAG+LA FR D+ M T Y + +G P+G
Sbjct: 1 MVMVAFICACASAAHSDGDGSAS-LGFAAVWTVLLLIGLSVGGSLVMRKYRTSLAVGFFLGVVIIMSQTMLVLFAVFAGRASTAEDVDEKPADRAFAAFCFFLWIVYSTFAGMLAVFREDIIMDDTTKYEDDPVPEASGQPPIG 143
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: F0YCM6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCM6_AURAN) HSP 1 Score: 102 bits (253), Expect = 6.190e-23 Identity = 66/173 (38.15%), Postives = 95/173 (54.91%), Query Frame = 3
Query: 126 KTIQYTWLASLALVAISFICACVAASKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEI--GADNAVAFFCFVLFMVYGFFAGVLAFFR--------NDLMKATDAYNSN------AGGIPVGF*IEDLP 596
+ + Y W S+ LV SF A V A + +G+ +GFA V+T +L + +SVGGT V+RK++T A+G FLGVV +M+ QCL++ A+F +G E AD+ F F LF+VY FFA +LA FR NDL+K +++ AG P +E LP
Sbjct: 24 RFVAYAWFTSILLVLASFFAAAVVADRHRGKGTG-GLGFAAVWTTILCLFISVGGTVVMRKFQTGFAIGIFLGVVTVMANQCLMMVAIFGQWSGNEDEDKESKKAADDTFTTFSFFLFVVYAFFASLLAVFRASFGACFGNDLIKEDSVASTDVDVSVPAGDAPAAETVEPLP 195
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: A0A3R7JUR8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JUR8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 8.910e-22 Identity = 61/150 (40.67%), Postives = 88/150 (58.67%), Query Frame = 3
Query: 108 CARNPDKTIQYTWLASLALVAISFICACVAA--SKISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADN-------AVAFFCFVLFMVYGFFAGVLAFFRNDLMK 530
C +NP I Y W A++ + I A VAA + EG + +IGF GV+ +LL+I LSVGGT V+R+Y+TPLAVGFF+GVV+MMS Q + +F G A + + GA++ A + F F +F++Y VL RN ++K
Sbjct: 17 CCKNPKLLITYLWFATIVFGFMYAIAAIVAAVNNNGDGEGDSKSIGFVGVWAMLLIIALSVGGTLVMRRYQTPLAVGFFIGVVMMMSLQMFSLSIIFMGAAYLARIERAKGAEHTNVHSNEAGSVFSFFMFVLYAILTIVLVKHRNIIIK 166
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: D7FX95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX95_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 1.770e-21 Identity = 59/155 (38.06%), Postives = 84/155 (54.19%), Query Frame = 3
Query: 105 HCARNPDKTIQYTWLASLALVAISFICACVAASK--ISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMKATDAYNSNAGG 563
H +NP K + Y+W L A+ + A + AS S GS+ A FA V+T+ +++ +SV GT +L+KY TPLAVG LG+ MMSQ ++FAVF A D +A F F LF++YG F+ VL +R +M +SN G
Sbjct: 16 HADKNPSKVVSYSWYLVLIFAAVDVLVALINASTNDSSANGSHAA-SFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSNDEG 169
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: A0A3M6VKC4_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKC4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.080e-21 Identity = 59/159 (37.11%), Postives = 93/159 (58.49%), Query Frame = 3
Query: 108 CARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSNTA--IGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIG-------ADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMKATDAYNSNA 557
C RNP I Y W +++ + I A VAA +G + + +GF GV+ ++L++ LSVGGT V+R ++TP+AVGF +GVVLMMS Q + +FAG A + + + G +++A + F F +F++Y FF VL +RN ++K + NA
Sbjct: 15 CFRNPKMIITYLWFSTMLFGFMYAIAAIVAAVNNDGKGESDSKSLGFVGVWAMILIVALSVGGTMVMRNHRTPMAVGFLIGVVLMMSLQMFSLSIIFAGAAYLARIERDKGDKHTNVHSNDAGSVFSFFMFILYAFFTIVLVRYRNIVIKEGVNLDPNA 173
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Match: A0A0P1APE9_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APE9_PLAHL) HSP 1 Score: 97.4 bits (241), Expect = 4.890e-21 Identity = 59/150 (39.33%), Postives = 88/150 (58.67%), Query Frame = 3
Query: 108 CARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSNTA--IGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLS-------SEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMK 530
C NP I Y W ++ + I A VAA + EG + + +GF G++ ++L+++LSVGGT V+RKY+TPLAVGF +GVVLMMS Q + +FAG A + + + + +D A + F F +F+ Y FA VL RN ++K
Sbjct: 20 CINNPKMLITYMWFTTILFGFMYAIAAIVAAINNNGEGESDSKSLGFVGIWAMILIVVLSVGGTMVMRKYQTPLAVGFLIGVVLMMSLQMFSLSIIFAGTAYLARIERAKGDEHTNVHSDEAGSVFSFFMFICYFAFAIVLVRHRNIVIK 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.236.1 >prot_H-akashiwo_Contig1.236.1 ID=prot_H-akashiwo_Contig1.236.1|Name=mRNA_H-akashiwo_Contig1.236.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=169bp MGFIHDTLCVHCARNPDKTIQYTWLASLALVAISFICACVAASKISTEGSback to top mRNA from alignment at H-akashiwo_Contig1:9622863..9625227+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.236.1 ID=mRNA_H-akashiwo_Contig1.236.1|Name=mRNA_H-akashiwo_Contig1.236.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2365bp|location=Sequence derived from alignment at H-akashiwo_Contig1:9622863..9625227+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:9622863..9625227+ >mRNA_H-akashiwo_Contig1.236.1 ID=mRNA_H-akashiwo_Contig1.236.1|Name=mRNA_H-akashiwo_Contig1.236.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=507bp|location=Sequence derived from alignment at H-akashiwo_Contig1:9622863..9625227+ (Heterosigma akashiwo CCMP452)back to top |