mRNA_H-akashiwo_Contig1.225.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: A0A6A7G369_9CRUS (EF-Hand 1, calcium-binding site (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G369_9CRUS) HSP 1 Score: 152 bits (383), Expect = 7.080e-41 Identity = 71/87 (81.61%), Postives = 78/87 (89.66%), Query Frame = 2
Query: 2 NLQPKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
NL KHKKMLNL+ DWLRS+LPHVLQKIDRVSFGI +K DY A++ DPHMPR+RAKL VPFVGKDVPSRSSEFAHPD+IIGLTVLA
Sbjct: 123 NLSQKHKKMLNLSRDWLRSFLPHVLQKIDRVSFGILSKSDYRNAMRMDPHMPRTRAKLGVPFVGKDVPSRSSEFAHPDIIIGLTVLA 209
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: A0A0M0J568_9EUKA (Nxn protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J568_9EUKA) HSP 1 Score: 137 bits (345), Expect = 9.480e-36 Identity = 63/86 (73.26%), Postives = 75/86 (87.21%), Query Frame = 2
Query: 5 LQPKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
L PK KMLNLA +WLR++LPH LQKIDRVSFG+ + +Y+R +K +PHMPRSR KLA+PFVGKDVPSR+SEFAHPD+IIGLTVLA
Sbjct: 469 LDPKAFKMLNLATEWLRTFLPHTLQKIDRVSFGLLSTHEYERLLKTEPHMPRSRFKLAIPFVGKDVPSRASEFAHPDIIIGLTVLA 554
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: F2UMB7_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UMB7_SALR5) HSP 1 Score: 135 bits (341), Expect = 3.330e-35 Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 2
Query: 2 NLQPKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVL 259
NL K K+LNL HDWLRSYLPH LQKIDRVSFGI N+ D A++ DP MP SR KLA+PFVGKDVPSRSSEFAHPDVIIGL++L
Sbjct: 4564 NLGAKQMKLLNLTHDWLRSYLPHCLQKIDRVSFGIMNEADKKHALEVDPRMPLSRFKLAIPFVGKDVPSRSSEFAHPDVIIGLSIL 4649
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: A0A7R9U8W2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8W2_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.140e-34 Identity = 60/84 (71.43%), Postives = 75/84 (89.29%), Query Frame = 2
Query: 11 PKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
P HKK+LNL+HDWLR++LPHV+ KI+RVSFG+ ++ + A++ DP++PRSR KLAVPF+GKDVPSRSSEFAHPDVIIGLTVLA
Sbjct: 1302 PLHKKLLNLSHDWLRTFLPHVMAKINRVSFGLLSEEQCETALQEDPYVPRSRLKLAVPFIGKDVPSRSSEFAHPDVIIGLTVLA 1385
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI) HSP 1 Score: 132 bits (333), Expect = 4.000e-34 Identity = 61/86 (70.93%), Postives = 71/86 (82.56%), Query Frame = 2
Query: 5 LQPKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
L H KMLNL HDWLRS+LPHVL KIDRVSFG+ D RA++ADP MP+SR LAVPFVGKDVPSR+SEF+HPDV++GLT+LA
Sbjct: 3290 LSDDHIKMLNLTHDWLRSFLPHVLTKIDRVSFGLLTPADLKRALEADPKMPKSRKLLAVPFVGKDVPSRASEFSHPDVVVGLTILA 3375
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: A0A7S1MDA9_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MDA9_NEODS) HSP 1 Score: 125 bits (315), Expect = 4.750e-34 Identity = 58/87 (66.67%), Postives = 70/87 (80.46%), Query Frame = 2
Query: 2 NLQPKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
+L H KMLN AHDWL S+LPHV+QKIDRVSFGI N D RA + P+MPRSR A+PF+GKD+PS+SSEFAHPDV+IGL++LA
Sbjct: 1 SLDADHVKMLNFAHDWLSSFLPHVMQKIDRVSFGIMNADDIRRAREEHPNMPRSRFVTAIPFIGKDLPSQSSEFAHPDVVIGLSILA 87
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: A0A7S2JLE7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JLE7_9EUKA) HSP 1 Score: 124 bits (310), Expect = 5.190e-34 Identity = 55/86 (63.95%), Postives = 73/86 (84.88%), Query Frame = 2
Query: 5 LQPKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
L K K+LNL +W+R+YLP LQKIDRV+FG+ ++ +Y+R + +PHMPRSR+KLA+PFVGKDVPSR+SEFAHPD+IIGL++LA
Sbjct: 21 LDIKSFKLLNLTKEWVRTYLPFCLQKIDRVTFGLLSEDEYERLKETEPHMPRSRSKLAIPFVGKDVPSRASEFAHPDIIIGLSILA 106
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: A0A3P3YPG6_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YPG6_PLABS) HSP 1 Score: 132 bits (331), Expect = 7.430e-34 Identity = 62/87 (71.26%), Postives = 74/87 (85.06%), Query Frame = 2
Query: 2 NLQPKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
+L +H+KMLNL+ DWL ++LPHV+ KIDRVSFG+ + D+ RAI DP MPR+RAKLAVPFVGKD PSRSSEFAHPDVI+GLTVLA
Sbjct: 2867 DLPVQHRKMLNLSKDWLNTFLPHVIAKIDRVSFGLLSDDDFARAIAVDPLMPRTRAKLAVPFVGKDSPSRSSEFAHPDVILGLTVLA 2953
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: A0A7S0DF82_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DF82_9EUKA) HSP 1 Score: 131 bits (330), Expect = 1.020e-33 Identity = 60/87 (68.97%), Postives = 72/87 (82.76%), Query Frame = 2
Query: 2 NLQPKHKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
NL H +M++LA DW SYLPHV+QKI+RV+FGI N+ D RAIK DPHMP++R +LA+PFVGKD PS SSEFAHPD+IIGLTVLA
Sbjct: 3833 NLDAGHLQMISLARDWCTSYLPHVMQKINRVTFGILNETDIQRAIKRDPHMPKTRVRLAIPFVGKDKPSESSEFAHPDIIIGLTVLA 3919
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Match: A0A7S4RRX4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RRX4_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.870e-33 Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 2
Query: 17 HKKMLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLAVPFVGKDVPSRSSEFAHPDVIIGLTVLA 262
HKKMLNL H WLR++LPH L KI+RVSFG+ N D +A+ DP++PRSR KLAVPFVGKDVPS+SSEFAHPDVIIG+TVLA
Sbjct: 298 HKKMLNLCHSWLRTFLPHCLSKINRVSFGLLNSDDCQKALADDPNVPRSRLKLAVPFVGKDVPSKSSEFAHPDVIIGMTVLA 379 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.225.1 >prot_H-akashiwo_Contig1.225.1 ID=prot_H-akashiwo_Contig1.225.1|Name=mRNA_H-akashiwo_Contig1.225.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=79bp MLNLAHDWLRSYLPHVLQKIDRVSFGIFNKGDYDRAIKADPHMPRSRAKLback to top mRNA from alignment at H-akashiwo_Contig1:9363229..9364078+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.225.1 ID=mRNA_H-akashiwo_Contig1.225.1|Name=mRNA_H-akashiwo_Contig1.225.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=850bp|location=Sequence derived from alignment at H-akashiwo_Contig1:9363229..9364078+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:9363229..9364078+ >mRNA_H-akashiwo_Contig1.225.1 ID=mRNA_H-akashiwo_Contig1.225.1|Name=mRNA_H-akashiwo_Contig1.225.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=237bp|location=Sequence derived from alignment at H-akashiwo_Contig1:9363229..9364078+ (Heterosigma akashiwo CCMP452)back to top |