mRNA_H-akashiwo_Contig1.224.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A3P3YPG6_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YPG6_PLABS) HSP 1 Score: 67.0 bits (162), Expect = 1.030e-11 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQV 147
V LVR+ +GS+ QG SLVKQMIMG GKTTV+ PL+ ML DGR LVTQV
Sbjct: 2571 VQLVREFMGSLGQGASLVKQMIMGAGKTTVVGPLLALMLGDGRGLVTQV 2619
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: F2UMB7_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UMB7_SALR5) HSP 1 Score: 65.1 bits (157), Expect = 4.910e-11 Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQV 147
V LVRDIVG++Q+G S+VKQMIMG GKTTVI PL+ ML DG++ V QV
Sbjct: 4261 VELVRDIVGALQRGESIVKQMIMGAGKTTVIGPLVCLMLADGKAFVGQV 4309
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A7S1J653_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J653_9EUGL) HSP 1 Score: 62.0 bits (149), Expect = 5.980e-10 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQV 147
V LV + +GS++QG SLVKQMIMG GKTTV+SPL+ ML DG+ LV +V
Sbjct: 2740 VQLVHEFMGSLKQGQSLVKQMIMGAGKTTVVSPLLALMLADGQGLVMEV 2788
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A8J5XT57_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XT57_DIALT) HSP 1 Score: 60.1 bits (144), Expect = 2.860e-9 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQ 144
V L+ + VG ++ G LVKQM+MGGGKTTVISP++ ML DG+SLV Q
Sbjct: 3560 VQLIAEFVGKVRAGEPLVKQMLMGGGKTTVISPILSLMLGDGKSLVVQ 3607
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A0M0J568_9EUKA (Nxn protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J568_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 3.910e-9 Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQ 144
V LVR+ V +++ G LVKQM+MGGGKTTV+ P++ ML DGR+LV Q
Sbjct: 125 VALVREFVDAVRGGRPLVKQMLMGGGKTTVVGPMLALMLGDGRTLVVQ 172
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A7S0LY42_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LY42_9CRYP) HSP 1 Score: 59.7 bits (143), Expect = 3.910e-9 Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQV 147
V +VRD VG I++G+S VKQMIMG GKTTV++PL+ ML D +SLV V
Sbjct: 1250 VEIVRDFVGHIKEGSSKVKQMIMGAGKTTVVAPLLALMLADSKSLVLSV 1298
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A7S2JMD4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JMD4_9EUKA) HSP 1 Score: 59.3 bits (142), Expect = 5.120e-9 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQ 144
V LVR+ + ++Q G LVKQM+MGGGKTTV+ PL+ ML DG LV Q
Sbjct: 67 VQLVREFIAAVQSGKPLVKQMLMGGGKTTVVGPLLTLMLGDGERLVVQ 114
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A7S4CT20_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CT20_9EUGL) HSP 1 Score: 59.3 bits (142), Expect = 5.340e-9 Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQV 147
V LVR+ + S++ G SLVKQMIMG GKTTV+SPL+ ML DG LV +V
Sbjct: 657 VALVREFMSSLRSGKSLVKQMIMGAGKTTVVSPLLALMLADGDGLVMEV 705
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A7S4FNZ6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FNZ6_9EUGL) HSP 1 Score: 59.3 bits (142), Expect = 5.350e-9 Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQV 147
V LVR+ + S++ G SLVKQMIMG GKTTV+SPL+ ML DG LV +V
Sbjct: 2754 VALVREFMSSLRSGKSLVKQMIMGAGKTTVVSPLLALMLADGDGLVMEV 2802
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Match: A0A7S0NWA7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NWA7_9EUKA) HSP 1 Score: 58.9 bits (141), Expect = 7.310e-9 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQ 144
V LV + VG++ G LVKQM+MGGGKTTV+SPL+ +L DG LV Q
Sbjct: 701 VQLVEEFVGAVHSGVPLVKQMLMGGGKTTVVSPLLALLLGDGERLVVQ 748 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.224.1 >prot_H-akashiwo_Contig1.224.1 ID=prot_H-akashiwo_Contig1.224.1|Name=mRNA_H-akashiwo_Contig1.224.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=49bp VGLVRDIVGSIQQGTSLVKQMIMGGGKTTVISPLIVTMLDDGRSLVTQVback to top mRNA from alignment at H-akashiwo_Contig1:9359215..9359361+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.224.1 ID=mRNA_H-akashiwo_Contig1.224.1|Name=mRNA_H-akashiwo_Contig1.224.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=147bp|location=Sequence derived from alignment at H-akashiwo_Contig1:9359215..9359361+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:9359215..9359361+ >mRNA_H-akashiwo_Contig1.224.1 ID=mRNA_H-akashiwo_Contig1.224.1|Name=mRNA_H-akashiwo_Contig1.224.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=147bp|location=Sequence derived from alignment at H-akashiwo_Contig1:9359215..9359361+ (Heterosigma akashiwo CCMP452)back to top |