mRNA_H-akashiwo_Contig1.181.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: F0VID2_NEOCL (Putative 2OG-Fe(II) oxygenase family protein n=2 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VID2_NEOCL) HSP 1 Score: 65.1 bits (157), Expect = 9.130e-11 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALTCWF 225
T + YLN +W PA GGCLRL+ D LDV PR LVVFR++++EH+V P A R A+TCWF
Sbjct: 182 TAILYLNEDWKPACGGCLRLYLDD-----------CRLDVSPRLGKLVVFRSEQLEHSVMPVTCA-DRYAITCWF 244
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A7S2GGA1_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2GGA1_9DINO) HSP 1 Score: 59.3 bits (142), Expect = 4.110e-9 Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALTCWFHE 231
T+ YY+N W+ GG LRL+ RH+D+ P D+LV+FR+D++ H VRP+ R ALT WF++
Sbjct: 96 TLTYYMNNRWSQEYGGQLRLW----------PGNNRHVDIWPEADSLVLFRSDEINHEVRPS--KERRRALTIWFNK 160
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A1G8XX02_9BACT (SM-20-related protein n=1 Tax=Catalinimonas alkaloidigena TaxID=1075417 RepID=A0A1G8XX02_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 7.340e-9 Identity = 34/76 (44.74%), Postives = 41/76 (53.95%), Query Frame = 1
Query: 7 LYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALTCWFHED 234
+ YLNP WTPA+GG LR++ D G H DV P G TLV FR+ V H V P A R R +LT W +
Sbjct: 135 ILYLNPNWTPADGGQLRIYEAD---------GLGHTDVTPYGGTLVCFRSADVFHEVLP--AHRERFSLTGWLRTE 199
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A0U9HKK6_KLENI (Procollagen-lysine 5-dioxygenase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HKK6_KLENI) HSP 1 Score: 60.1 bits (144), Expect = 1.080e-8 Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALTCWFHE 231
TVLYYLNPEWTP +GG LRLF D A+ +D+ P G +V+F + +EH V P A R A+T WF E
Sbjct: 209 TVLYYLNPEWTPNDGGQLRLFLKDGAS----------IDLPPMGGNVVLFESG-MEHEVLPAHAKR--FAVTAWFSE 272
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A1G3EAX8_9GAMM (2OG-Fe(II) oxygenase n=1 Tax=Pseudomonadales bacterium RIFCSPLOWO2_12_59_9 TaxID=1802009 RepID=A0A1G3EAX8_9GAMM) HSP 1 Score: 58.2 bits (139), Expect = 2.080e-8 Identity = 33/75 (44.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALTCWF 225
+V++YLNPEW P +GG LRL+ R LDV P+ TL+VF + HAV P A R R++LT WF
Sbjct: 136 SVVFYLNPEWLPEQGGALRLY----------LDAGRELDVYPQAGTLLVFMSADWPHAVLP--ANRERLSLTGWF 198
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A7S2UBF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBF6_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.410e-8 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGE-RHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALTCWFHEDLTA 243
++L YLN W+P +GG LRL H D E +LDV PRG TLV+FR++++ H V T A R +A+ W++ +TA
Sbjct: 222 SLLLYLNENWSPEDGGKLRL-HMDSGGDELPAGEEPNYLDVEPRGGTLVLFRSEQLPHEVLDTKATR--LAIVGWYNRAMTA 300
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A0B4XML5_9GAMM (2OG-Fe(II) oxygenase family oxidoreductase n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A0B4XML5_9GAMM) HSP 1 Score: 58.2 bits (139), Expect = 2.630e-8 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALTCWFHED 234
+V+ YLN WTPA+GGCLRL+ P P A LDV PR +LV F ++++ H V P A R+++ WF +
Sbjct: 144 SVVVYLNALWTPADGGCLRLW-PQPDAV------HHDLDVAPRAGSLVCFLSEQIPHEVLP--ARHDRLSIAGWFRRN 212
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A7S4QCF2_9DINO (Hypothetical protein (Fragment) n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QCF2_9DINO) HSP 1 Score: 58.2 bits (139), Expect = 4.980e-8 Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALT 216
T++YY+NP W+ GG LRL+ +RH+D+ P D+LV+FRAD++ H VR + R R+ALT
Sbjct: 349 TLVYYMNPTWSQENGGALRLW----------PGRDRHVDIWPEADSLVLFRADEITHEVRNS--NRRRLALT 408
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A2D4CKD2_PYTIN (Prolyl 4-hydroxylase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CKD2_PYTIN) HSP 1 Score: 57.4 bits (137), Expect = 7.480e-8 Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPT-----LAARGRMALTCWFHED 234
T++YYLNP+W P++GG LRLF D V P+ DTL +F +D+V H V PT L + R ALT W D
Sbjct: 184 TMVYYLNPDWAPSQGGELRLFTRDDGIKV----------VPPKADTLAMFWSDQVVHDVLPTVSDPTLKDQRRYALTLWLVTD 256
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Match: A0A7R9VD70_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VD70_9CHLO) HSP 1 Score: 57.4 bits (137), Expect = 9.730e-8 Identity = 33/79 (41.77%), Postives = 42/79 (53.16%), Query Frame = 1
Query: 1 TVLYYLNPEWTPAEGGCLRLFHPDPAAXXXXXXGERHLDVGPRGDTLVVFRADKVEHAVRPTLAARGRMALTCWFHEDL 237
T L YLN WTPA+GGCLRLF G++ +DV P G L F + V H VRP A R + T W+++ L
Sbjct: 656 TCLCYLNKNWTPAKGGCLRLF----------VEGQQPVDVLPLGGRLAFFWSKTVAHEVRPAHAPRH--SFTLWYYDAL 722 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.181.1 >prot_H-akashiwo_Contig1.181.1 ID=prot_H-akashiwo_Contig1.181.1|Name=mRNA_H-akashiwo_Contig1.181.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=81bp TVLYYLNPEWTPAEGGCLRLFHPDPAAAAGGGGGERHLDVGPRGDTLVVFback to top mRNA from alignment at H-akashiwo_Contig1:7681869..7682113+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.181.1 ID=mRNA_H-akashiwo_Contig1.181.1|Name=mRNA_H-akashiwo_Contig1.181.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=245bp|location=Sequence derived from alignment at H-akashiwo_Contig1:7681869..7682113+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:7681869..7682113+ >mRNA_H-akashiwo_Contig1.181.1 ID=mRNA_H-akashiwo_Contig1.181.1|Name=mRNA_H-akashiwo_Contig1.181.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=243bp|location=Sequence derived from alignment at H-akashiwo_Contig1:7681869..7682113+ (Heterosigma akashiwo CCMP452)back to top |