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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 163 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 3 |
| Cds size | 162 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681387028.414812-CDS-H-akashiwo_Contig1:1501688..1501744 | 1681387028.414812-CDS-H-akashiwo_Contig1:1501688..1501744 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1 1501689..1501744 + |
| 1681387028.5851884-CDS-H-akashiwo_Contig1:1503746..1503793 | 1681387028.5851884-CDS-H-akashiwo_Contig1:1503746..1503793 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1 1503747..1503793 + |
| 1681387028.6572251-CDS-H-akashiwo_Contig1:1510142..1510201 | 1681387028.6572251-CDS-H-akashiwo_Contig1:1510142..1510201 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1 1510143..1510201 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.15.1 >prot_H-akashiwo_Contig1.15.1 ID=prot_H-akashiwo_Contig1.15.1|Name=mRNA_H-akashiwo_Contig1.15.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=54bp
GGGGPASGAAGLERPHAPARGLHALAAHATGPLEGGPEHPERGAAGNALP
DRLG back to topmRNA from alignment at H-akashiwo_Contig1:1501689..1510201+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig1.15.1 ID=mRNA_H-akashiwo_Contig1.15.1|Name=mRNA_H-akashiwo_Contig1.15.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=8513bp|location=Sequence derived from alignment at H-akashiwo_Contig1:1501689..1510201+ (Heterosigma akashiwo CCMP452)
GGGGGAGGCGGCCCGGCGAGCGGCGCCGCAGGCCTCGAGCGCCCCCATGC
CCCAGCGTGAGCGCCCTTCTTCTTCATCATCTTCTTCTTCTTTTGCATAC
GTTTAAGCAATCATGAAAAATAAATCCCAATATGCATTACTGTCGTTTCG
CATTCGTCGTCATATATATGCTTTTGGAGTTGTTTTCTAAGTGGAGTGAA
TTTTTCGATGTGTTGTAGTTGATGGAGCACTTCATCGTCGAGGTTGTTTC
AAACTTCAGGAATTCTTACTTTCCAGCTTCTTCTGTAAGTCTCTTCTTCT
TCTTTCTCTTCTTCTCTTTTTTTGTTGCACCGCATAGTTAGAGATTGTGA
GAATAAGCGTTTCAATATGTATATGTTTCCATGATATACTATATCATCTC
TCACCTTCACACTGGGTCAGCTCTACCGCTTTCCGCGACATCTGGTAACA
AAATCCTATTGACCAGTGGACACTGTGATCTGTACGATTCGATTTCTGTT
TTGGGATGGTTCCGTTGTCTGTGGCGAATCAGCTGTTTCTCTCCAGATGA
TCCACCCCTGGCTTGCAGGAAGGAGCAGATGCACTCGTTGATGGATGTGG
GTTGTCAGAAGAAGCATCTACAGCAGAGACAACTGAACGACAGCGATGAG
GCCACGGGGCAATAGAACATGTATCATGATGATGGTTTTGGATGACTCTG
GCACATCAGGAAAATAACCGGTTCCACCAAGTCAGTGAATTTAGTAGCAA
ACCACCATGATGGCCAAGATAAGTTTCATTGGTAGATGATGATGATGATG
ATGATTTTAATTTATTTGAGGTCCAGCCGCTCCGATAACTACAAGGACCG
AAGCCCCAGCCTCCACAAGCGGACCCTGCCACATCTAGGTCCCAACTTCT
CATTCATTGTATACATCACCAAAACTTCAGACGCTACTGATTCCAACAGC
ATACCTCCCCTGTAGCCAGTCTTCTCCTCTTATCTCCATACTGCCTTCCC
CTAAACATACCCAACCCATTACAGCACCAATATACCTGCCCTTGCCCCAC
AGCAGAAGCCCCTTTACCTAACCTACAGGTATCCACAAGTAGGTGCCCAC
CATCCCCCCAAGTATGCCCCCCTACTCCAGTCCCTCTAGCACAGCCCCAG
CTGGGTCCTCCATGACTGCCATCTCTCTTTCATTCACTCCTCCGATGGCG
GGTTGCTGAGTTCATGTATCATCATGTCAAAGAAGGCCCGCCCCCCCTGA
ATGGTGCACCTCTCCCCCCCACGTTCCCCCCTCCTGCAGCAGACGTGGCA
CCCTCCCAACGGGCATGTGCTGAACATCACCTCACTCTTCCCCCAACTTT
CTGGTTCTTGTTGGTGTTTTATGATGCCACACTTCCCACAAGCAACCTTC
AGCCTGGTCATGCCAATCCTGGCACACAATCGCGGGGCCTGCTCGTCCTC
AGTCCCACCACCTGCAGCCCTGTCTGGTTCCCTAGCCAGCCCATGGCCTC
TGCCCCCCCTACCCCTTGGCATCCGTGCAGGACCCCTCACCCTCCCGGCT
CCTCTGCCCCTGCCCCGACCCTCAAGCTGCCTTGCCCCTTCTGCCGGCCC
CTTGGCCTCTGCTTCCTGGCACGCTGTGGCAGCTGTAGCTAATGCTTCTT
GCTGGGGCTAAGGTCTTCTTTCGCCTGCTGCGCCTGCACCTCCTGGTTCT
CCAACCTTGCTGCTTCCGTTGCTCAACTGAAAATAGACAGCGATGAGGCC
ACAGGACAATAGAACATGTAGGGTCTCGCGCGGCTGGGACTCTCCTGGGT
CGGCCAGTAGCGATACGTCGCCCAACGAAGTGTTCAGCTGTCCGGGCGGC
CCGGAAGAAGGAGCACATCATTGCAAGTTAGGAACGCAGAAATAAAACTG
AAAGCTTTGTGGTGGTGTCTACGAAAAGCATTATACTGGGCCAACGCCTT
CCTTTTGGAATATATCCTATGCCCTGATCGGCGGTCTTATTAATCAAATA
GAATCCATTTTTAACCAACTGGAAAACTCCATCCTAGTTCCCTTTCTCTC
CTCCCCAGCCGCGGACTTCATGCCCTCGCCGCCCACGCCACTGGACCACT
CGAGGGTGAGCGTGATCCGCGCGTGCTGGGCTTGGGGAGAAGAGGGGGAG
GTGCAAAAGGAGACAGCTTCGCCTTTGCTACACCCCCTCCTCTTCCCCAC
CAAAGAGAGGAGGGGGAGGTGTACAGGGCCGCACCCTGGGGAGAAGAGGG
GGAGGTGCAACGGGCTTCGCCGAGCGCGAGCCGcCCCCGAAGAAGTTTCC
CTTTACACCTCCCCCTCTTCTCGCCAAGATCCCCTTTGCACTTCTCCCTC
CTCTCTTTGGTGGGGAAGAGAAGGTGGTGCGCATGGCCGAGGCCTTCGAG
AATAATTTTTATTTTATTTTTATATGTTTTAATAACATACTATAATCAGA
TTTGTTGTGAACATGGAGGAGAAGGAGGGCAGAATGTTTCCTTAACAGCT
GGGGTGGGGTACATGAGCAACAAGTGACTGGTGGCGGCGGCTGGTTCCAG
CCGTCAGAGCTTTTCATTTTGTTGTTGTCCATTCTTCTTCTCTCATTCAT
TTCCCATCTTCAAAGTGTTTTCATTTTAGTCAGAGGCAGCCTGATGAAGG
CTGGCGGAGGATGGAGGGAGCCGCCAGCCGTGGCTTTTAGTTGCCGGAAT
GCAGCATAGTTGTCATGGACTTAATGATTAAAAACCTTTGACATATTGCC
TTCTTGGCAGTGTGGAACTATACTCACTGATGTTGAAAACGGTTCTCTGT
TTAGACCCAACACCCTGCAATGTTTTCGTCTACCTGAAAAGTATCTGGAC
TGAGGTACTCTACGCATTCAGTTCAGTTTTTTCGTCCCTGCTCCGCCTGT
GCAAACGATTAACTTCACGTTTAGTGAGCTGCCATGCTTGTGGAAGACTG
GTGACTTGCGaaGCGCTTAGGCTGCTGACGCTCCAGCCGAAAAGCAGTCG
ACTAGAGGGGTGTAGGTGGTGCCTTCGGGCGCTATCCATGCCTCTCTCGG
ATGAAGCCTCTATCGTTCTTCGATGGAGGAAGAATCCACCCCTCGGGATA
GATATCGACAGCAACTGATGGTGGCGAGCTTTCCTGCTCGTCATGGGTTC
CATCAACCGGGACAAACCCCGTCCTTGTGCGGGCTGTATAGCCCGGTGGT
GGTAGGCTGGAGGAAGACCCGACTTGTGGCCCCAATTCGGTGCGCGGACC
AATCCGTGTGCTGATTCAGACCTTACCATAAAACAGTTGAGCTTAGCTCC
TCAGGCCTTAGACTTTTGTTCTGAGGCTCGTGACCAGCACCTGTGCCGGT
TATGATGATGATGCTCAGATTTGTTGTGAACATGGAGGAGAAGGAGGGCA
GAATGTTTCCTTAACAGCTGGGGTGGGGTACATGAGCAACAAGTGACTGG
TGGCGGCGGCTGGTTCCAGCCGTCAGAGCTTTTCATTTTGTTGTTGTCCA
TTCTTCTTCTCTCATTCATTTCCCATCAGTGTTTTCATTTTAGTCAGAGG
CAGCCTGATGAAGGCTGGCGGAGGATGGAGGGAGCCGCCAGCCGTGGCTT
TTAGTAGCCGAAATGCAGCATAGTTGTCATGGACTTAATGATTAAAAACC
TTTGACATATTGCCTTCTTGGCAGTGTGGAACTATACTCACTGATGTTGA
AAGCGGTTCTCTGTTTAGACCCAACACCCTGCAATGTTTTCGTCTACCTG
AAAAGTATCTGGACTGAGGTACTCTACGCATTCAGTTCAGTTTTTTCGTC
CCTGCTCCGCCTGTGCAAACGATTAACTTCACGTTTAGTGAGCTGCCACA
TGCTTGTGGAAGACTGGTGACTTGCGGCGCTTAGGCTGCTGACGCCCAGC
CGAAAAAGCAGTCGACTAGAGGGGTGTAGGTGGTGCCTTGGGCGCTATCC
ATGCCTCTCTCGGATGAAGCCTCTATCGTTCTTCGATGGAGGAAGAATCC
ACCCCCCGGGATAGATATCGACAGCAACTGATGGTGGCGAGCTTTCCTGC
TCGTCATGGGTTCCATCAACCGGGACAAACCCGTCCTTGTGCGGGCTGTA
TAGCCCGGTGGTAGGCTGGAGGAAGACCCGACTTGTGGCCCCAATTCGAT
GCGCGCGGACCAATCCGTGTGCTGATTCAGACCTTACCATAAAACAGTTG
AGCTTAGCTCCTCAGGCCTTAGACTTTTGTTCTGAGGCTCGTGACCAGCA
CCTGTGCCGGTTATGATGATGATGCTCAGATTTGTTGTGAACATGGAGGA
GAAGGAGGGCAGAATGTTTCCTTAACAGCTGGGGTGGGGTACATGAGCAA
CAAGTGACTGGTGGCGGCGGCTGGTTCCAGCCGTCAGAGCTTTTCATTTT
GTTGTTGTCCATTCTTCTTCTCTCATTCATTTCCCATCTTCAAAGTGTTT
TCATTTTAGTCAGAGGCAGCCTGATGAAGGCTGGCGGAGGATGGAGGGAG
CCGCCAGCCGTGGCTTTTAGTAGCCGAAATGCAGCATAGTTGTCATGGAC
TTAATGATTAAAAACCTTTGACATATTGCCTTCTTGGCAGTGTGGAACTA
TACTCAATGATGTTGAAAGCGGTTCTCTGTTTAGACCCAACACCCTGCAA
TATACTAATCAATGACAGATTGATAAGGACGCTTTTTACGATCCTCCAAC
AGAACTTCACAAGAACTGAATATATTTCGATTGAGAGTGTGATCTTCTTC
GGTGTTCCCAGCCGCTCTGGATACTTCAGCCAAGAAAATGGACTCTTGGT
CGAAATATTTAGGTCCTATGAAGTTCTGTTGGTTATTCTCATGAATCCAA
TTCTGGCACACCACAAACTTAATATAATATTATAAATAGTGAACAATCCT
TGAATATAGATATAATAGCGCTTTTTGTTTTTTTCCTCCCACCCAGAGCG
AAATGGTAAACAAAAAATGGTCACAAGGATGACACCGATAATTATGGTCA
CGAGGATGGTGAAACAAAACAATACAAAATAAAACTCTTGGCAGCAACAA
CAAATGATCGACTCACATTGACGGTTTGGCTTTGTACAGTGCTGCTGTGT
GCACGTTGTGGAACTTACAGTGGATACTATTATTCCCTGGCTCTTGCTTA
CTTGGACTGGTCTCTTGGTTCTTCTGGTTTACGGTGCATTATAGTGCCTT
TCAGCTCTCTTCTTTGGTCATATGGATCTGCTGCTGTTCCTTGGTGCTGT
AGTAACGATCTTCTTTCTTCTTTTCAGATCAAAATACAAAAAAAAAAAAA
AAAAAAAAACCAATGGATAATAATTGGGTATCTCTTCTGCCTGCCTCCAG
CTGATCAAAGTCAAGTATGGGGGATGCTCAACATAATGTTCAAGAAATGG
AGGGGCTAATACATGGAAAATGCAGGAGTTTTCTGAACTGGAGGGGTGGC
TCATAGTGCAGTACTACATGTACTACCTTGGTACCACTGCATACTTGACG
CATGTGATGCACAGTTCACTTGGTAAGCTGGAGCTGCTTAGGAGGGGGCT
TTGTTTACTGTGCTATACACGTGGAGCTGGGAAGAACAGGGAAGGGGGGA
AAGAAACACCAGCAGCTGCTGCTGCGCGCAAAGAAATCACCTGCAAGGTT
GGCGGTGTTGTTAAAGCACTTCTTGACGAGCTACAATCACAACTGGAAGG
CGGCAAAGGGGGTCTCGAGGGCAGGGGGGAGGACCGGGAGAACTCTTCTC
CTTCGTTATCCCAGGTGTCGTCGTCAGATTCGTTAAGCAGTGGGGAAGAA
ACGGAACTTGCATCTCAGGAAGAGTCAGAAGGGGAGTGCATCAACACAGC
CCCTGGGAAAAGAAAGTGGTAGAGGGATTCGAGCTGGTTGAAGGTAGAGC
GAGCTGTCGGCTTGCAAAGCGAGAGCACCAGAAGAAAATAGACCGGGAAC
GGGTTGAATTAGAAACGAAGGCGGAAAAGGCGGCAAAACAGGACCGTTTG
CTTCAGCACCAGGTAATGGCTAGGGCAGCAAAAAGGAGCGCCGGCATGCA
GAGTCCAGGTGGGCAGCTGAAGGGCTCGGCAGCTTGGGGGACAAGAAAGG
GGCGGGGCGGTGGAGCCGTGCGAGGGGGGAGGGAAGATATATTGGCTTGG
GGAAGAGGGGGACAGCGGAGCCCTGGGAGAGCAGCTCGTGGAAATGGAGG
AGCTGGGAGAGGGGAGGGTGCTGCTGGACGAACTCCTCCCTTGATGCCAT
ACTCGACCGCCCAAATGGTATGAGCTTTGAGGTGGCTTGTGGGAAATACG
GCACCATCAAGCACCCGCAGAGGTGCTTCAGGCAATGCCCGGTGGGAGTT
TGCCATGTTTGCTGGGGTGGCGTGGGGTAGGGGGTTGCAGCGTGGAGGAG
GGGCGGGCCTTCTTCATGGGTTGTTTAAGCCGTGGCAGCGCTCGACAGAG
GAACTTGAGAGCGTGTGGGCAGATTGGAAGAGCCAGTTGGGGTTTCGAGC
TTTTTCGTACCGCCGGAGCCGGGAGGGGTTTGTGCTGGGGGGCTGTTATT
TCTGCAGTGGATTGACTATATATTAGGCGGTAAAAGCACGGGGATGAGGG
GGGAAAAAGACTGGCAAATTGGAAAGTGTGCAGTTAAAATCAACGCAGGC
TAGCATCTTAAGTTTTGGTAATGAACCAGAGAATGAGAAGTGGGAGGGTC
CGTGTATAGAGGCCAGGGCTTCGGTTCTTGTAGTTATCCAAAAGGCTGGA
CCTTAAAAGAATTAATACCATCATCATCATCATGTCCCCAAAATTGACAA
CTTCTCAGAATATAGGTTTTGATTGCATTTGTTCTCGCCTATTTTCCAGA
GATCCGCAAGGAGCACCATCAATCGACCATGTCCCTTCGGGGTTAAGGTT
TGAGTGTGAGCATTTATGTTGGGAGCTCACTCAATAGGCGTATAACTCTG
ATCCATGAGGTGTTACTGGTTTAGCCCCCCCCCCCCTGTTTGTTAGCGCT
TCCGAGGATCACACTTGTTTTGTCTACCCGTAAGCACAACGTGGAGAAAA
TAGTTCATATTTGACAACAATAAGATTTTTTTTGGATGAGCACTGCGCAA
TCAATGAAGGTGTGATCTTTATACAGATGGAATATATATTACAGAAATGA
TTATTATTGAAGAATGATCCCTACACCATGAACTACAGCAAGCAGCAAGA
CCTGACGGTAGCTGCAACAACTACAGAAGAAGAAGTTTCGAAAACAGAGG
GAGACTGACCATGTCTATGGGAACTTCCTCGACTCGCAGGGTGGAGACAG
ATGCACTGATCGTGGTGGTGGGTTGTCGGAAGAAGAGCCAATGGATGAGA
CAATCGAAACACCGGATCTGGGCCAAAGGGCACAACAGAGTTTGTAGGAC
TTCGCGCAGGTGGAGCTCCCGCTTGTCACTAGCGAAACGCTGTCTGTCAA
AGTACTCAGAAACCAAGGCACGTGCAAGAAGACATTGGTTGTGGCTCAGG
AAGTGAGAGGAGCACATTGCATGATACAAATGTAGACAAAAAAAAAAGAG
ACTTATACTTGACTTATTATAGATGATTACAAGATCATCATATACTGTGG
GTATTTGCAGTATCGGCTAGTTAGCCTATCACAGTAGCCTGAGACTCCCA
TATAGGTGGATACGCGTGCGTGCGTACGTAAAACATCTGGAAGAAGCAGT
GCTTGCTTGTATCATCATTCTGTACATATATTGCTATTGTATATTTGGTG
GCCATTCCAACCGATAACCTACCTGGTTTGATAGTGACGCCCTTACACTT
TTCACTAAGGTGGTTCAATGGTCCTCTTGTGGGTACTAGTAATGCTTGTT
GGTATTTTTACTTCAACAACGACAATACTAGTCATAAACAAAAATTATAA
TGACAAGGCGAGTTGACGAAGGCCAGCCACCTGCCTCAGCTGGTGGTATG
CTCGAAACAACGCTGTCCACGACAGATCTTGTATAAGTAGTGATTTAAAA
ACCTTTGATACGTCGCCTCTTTGGCAATGTAGAGCTGTACTTGCTGATGA
TAGAAGCGGCCTCACTGTTTAAACCCAACACTTCAACAGTGAAAACAACA
GTGTTGCCAACTCCCTGGCAACTTTCAAAAGATGCTATGGTAGAGCTAGA
ATCCCGGGCATATGGAACAGTCCAAGGCACCCCGCTCTCCAACAGCATGT
ACAAGGATGCCTTCCTCTTCGAAGACAACTACACACACATGGGCGATAGT
GGGTAGAAACAGCAACAGTTACAAAAGGCAATTCACATATGATGATGTTA
TATTTAGTTTCAAGTCTAGCCTTTCAAATCACTTTCGGGGCAATTTACAT
ACAGTCACTTAAATGCAATTTACATATAGTCACTTAAATGCTAAAACGTA
GAAGAAGAAAAAAAAAAAGTATATATATATATAATATAAATGGCGGGGTG
ACAGGTGGTCCGGAACATCCTGAACGGGGAGCCGCGGGTAACGCGCTTCC
CGATCGACTGGGC back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig1:1501689..1510201+ >mRNA_H-akashiwo_Contig1.15.1 ID=mRNA_H-akashiwo_Contig1.15.1|Name=mRNA_H-akashiwo_Contig1.15.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=162bp|location=Sequence derived from alignment at H-akashiwo_Contig1:1501689..1510201+ (Heterosigma akashiwo CCMP452)
GGGGGAGGCGGCCCGGCGAGCGGCGCCGCAGGCCTCGAGCGCCCCCATGC
CCCAGCCCGCGGACTTCATGCCCTCGCCGCCCACGCCACTGGACCACTCG
AGGGTGGTCCGGAACATCCTGAACGGGGAGCCGCGGGTAACGCGCTTCCC
GATCGACTGGGC back to top
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