mRNA_H-akashiwo_Contig1.142.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1.142.1
Unique NamemRNA_H-akashiwo_Contig1.142.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1.142.1 vs. uniprot
Match: A0A7S3XND9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XND9_HETAK)

HSP 1 Score: 250 bits (638), Expect = 2.900e-77
Identity = 118/126 (93.65%), Postives = 124/126 (98.41%), Query Frame = 1 
Query:   31 LSAVPEDDLSRTLKRAAHFRDEVLPEERLQNLMVEVKQSGLPAAVIFGALAPADKTHLPLHQWVGALRDLNRQAFFPLTEPECAEVAKLLFHVPAEGFEGDSYVHCETFREWCHDIKHLSWRAEKR 408
            LSAVPEDDLSRTLKRAA FRD+++PE+RL+NLMVEVKQSGLPAAVIFGALAPADKTHLPLHQWVGALRDLNRQAFFPLTEPECAEVAKLLFHVPAEGFEGD YVHCETFREWC+DIKHLSWRAEKR
Sbjct:  193 LSAVPEDDLSRTLKRAASFRDDLMPEQRLENLMVEVKQSGLPAAVIFGALAPADKTHLPLHQWVGALRDLNRQAFFPLTEPECAEVAKLLFHVPAEGFEGDIYVHCETFREWCYDIKHLSWRAEKR 318
[Close]
BLAST of mRNA_H-akashiwo_Contig1.142.1 vs. uniprot
Match: A0A7S3UX82_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX82_HETAK)

HSP 1 Score: 207 bits (527), Expect = 5.930e-62
Identity = 98/126 (77.78%), Postives = 109/126 (86.51%), Query Frame = 1 
Query:   31 LSAVPEDDLSRTLKRAAHFRDEVLPEERLQNLMVEVKQSGLPAAVIFGALAPADKTHLPLHQWVGALRDLNRQAFFPLTEPECAEVAKLLFHVPAEGFEGDSYVHCETFREWCHDIKHLSWRAEKR 408
            LSAVPEDDLSRTLKRAA FRD+++PE+RL+NLMVEVKQ+GLP  VIFG LAPAD+TH+PL QWV ALR LNRQAFFP+TE ECAEVA+LLFH PA  FEG  YVHC  FR+WC  IKHLSWRAEKR
Sbjct:  193 LSAVPEDDLSRTLKRAASFRDDLMPEQRLENLMVEVKQAGLPLGVIFGTLAPADRTHVPLGQWVQALRGLNRQAFFPMTEEECAEVAELLFHRPAPEFEGPQYVHCAAFRDWCFGIKHLSWRAEKR 318
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3XND9_HETAK2.900e-7793.65Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3UX82_HETAK5.930e-6277.78Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1contigH-akashiwo_Contig1:5595914..5606001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size412
Hectar predicted targeting categoryother localisation
Exons5
Cds size408
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387030.7744348-CDS-H-akashiwo_Contig1:5595915..55959581681387030.7744348-CDS-H-akashiwo_Contig1:5595915..5595958Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1 5595916..5595958 -
1681387030.7852075-CDS-H-akashiwo_Contig1:5600377..56004571681387030.7852075-CDS-H-akashiwo_Contig1:5600377..5600457Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1 5600378..5600457 -
1681387030.7951322-CDS-H-akashiwo_Contig1:5602524..56025991681387030.7951322-CDS-H-akashiwo_Contig1:5602524..5602599Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1 5602525..5602599 -
1681387030.828562-CDS-H-akashiwo_Contig1:5603274..56033881681387030.828562-CDS-H-akashiwo_Contig1:5603274..5603388Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1 5603275..5603388 -
1681387030.836336-CDS-H-akashiwo_Contig1:5605905..56060011681387030.836336-CDS-H-akashiwo_Contig1:5605905..5606001Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1 5605906..5606001 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1.142.1prot_H-akashiwo_Contig1.142.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1 5595916..5606001 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1.142.1

>prot_H-akashiwo_Contig1.142.1 ID=prot_H-akashiwo_Contig1.142.1|Name=mRNA_H-akashiwo_Contig1.142.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=136bp
ALLSPSKAAGLSAVPEDDLSRTLKRAAHFRDEVLPEERLQNLMVEVKQSG
LPAAVIFGALAPADKTHLPLHQWVGALRDLNRQAFFPLTEPECAEVAKLL
FHVPAEGFEGDSYVHCETFREWCHDIKHLSWRAEKR
back to top

mRNA from alignment at H-akashiwo_Contig1:5595914..5606001-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1.142.1 ID=mRNA_H-akashiwo_Contig1.142.1|Name=mRNA_H-akashiwo_Contig1.142.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=10088bp|location=Sequence derived from alignment at H-akashiwo_Contig1:5595914..5606001- (Heterosigma akashiwo CCMP452)
GCGCTGTTGTCACCGTCAAAAGCGGCGGGGCTCAGCGCTGTGCCGGAGGA
CGACCTGAGCCGCACCCTCAAGCGGGCCGCCCACTTCCGCGATGAGGTAA
AGAAGGAAGGGCGGCGGGGGGCTTGGCTTTTTCGGCATGAGGTGGCTGAG
GAAAGCCCCCTCCCCCCCCCTTTTTAACGTGTGTTCATGCTCTGGAGATG
TTGTTCCTACGGATGAATGGTTGGACAGCAGCTGGCAATTCTGGAAAAAC
TTTGTTGTTGGACTGAACCGATGAGATTCATTTGTCTGCATGGTGAATAA
TACTATAATATAACATGGGTATTATTGATTGAATTACTGCTCCTCCAACA
GACTAGGCACCTTAGCACCCGAGCTGGGAAATGCTTACATTAGGTACAAG
GGCCTTGCTGTGAACCAGAATGCTCGAGGCACACCAGCAAATGGATTAAA
TACATACGAATTACTTCTGCTGCTCCTGCTGCTGCTGACGACAACAACAA
GTACGGTCACGTAAGACACCAATGCATAAGGTTGGCTGAGTTCTAGCTAT
ACCCGGTATATATAGATATCCCCCAAAACAGATGGGTTACGTAGAACAAT
ATTCGAGCCTCCCTCATTGTTTATTTGGCTCGCGTGGTTTGTTCACAGCT
CTTGTTCTCCTTGCTCATCCGTTTCTTTTACTTCCCGAGTAGTGCTTTCC
CAGCGACACTCGCCATTTTTGCTGACGACGGTATCATTTTTACCTTGATC
GTCAGAAAAATAGCCAATACATAGAATTTGTACATTTGTCCAATCTTTGC
CTCAAAAACAGACGTTGCTATCGGTGGCAGCTGACACTAACGGTATCAGG
GGTGATACTACCGTTTATTTTTTTTGGGGGGGGGGGGTTACGAGATGAAA
AAGGGAACGATATAGGTCAGAAGCCCTACCATGGGCTGCCTGACCTATAA
CGTTCCCTTTTTCATCTTGTAACCCACAAATTTAACAAAACAGTGTCGAA
TTCCATAGAACAACCATTGCCAATCTTTGTTTTTCCCCACCCCGGTGTAC
TGTTCGATCGCTCTAGTCTCATGTCAAATTTCAACATTGTATCCAGAAAT
TTGGTATAGGTATAGAGGCTGGTGGCTCTGAGCACCTACTACTGTTCAGC
ACTGGCAAACACTATATGAGAATGTTGTGGCCTCGTAGCTCCATGAAACA
ACCACAACACAGCTGCCGTGTAGCGCCGGGGCTTCACTGCCCGAACACCA
CCGCGGCACTCCGTGATCGCGGCACTTGCACTCACCATACGTGTAAGAGA
GAAATGAAAATGGAAAAAATAAAGATATTTTTTTTCAATTCAAGCACTTG
GCAAGTACTTTGTCTATCAAAAAGTGCATTTTCAGGTGGGCAAAATGTTT
CAAAAATGACACACGGGCACACTATACATCAAGGACACCTGAATAATTCA
ATAACTTTTCTTCTGGAGTAGATACTGCTGTCTTGCTCTTCCACTATACT
TAGGACCCCGGGGCAGGGCCGGGGTAGGGGGGTGGGGGTGGGGGGAGGCA
ACAGTTCTGCTTCAGCAGAGCACTCGTTGCCATTGCCGCGTTCCGTTTGG
CGCGCACAAAATATTGCTTTGGAAATGAACTGGAATTGCTCCTTTTTGGT
GCATTCTACAGACTGGTACTAGTTCGCCAGATGACTTTTGTTTGAGCGCG
CTTTGAGTGAGTGCAGAGTTGGTCTGCTTGTATAGGAGCGAACCTGAACT
TGAAGGGTGGAGATAGGTGTACTCATCTAGGAATGAGGGTTGTTGGAGGA
AGCGTCCATGGCAGAGACAAGCGAAAGACTGTGATGAGCCCAACGGGCAG
TATAGAAGATGCAGGGCATTGGGGCGGTTGATCATCAAAGTTAGTTGGCA
ACTTTGATGGCAGCAGAATCGTGGCGCAGGAAGATGCCAAAAGAGCAAGT
TGCACGATGGCGGTGATGATGATGATGATGATTTTAATTTTAATTTATTT
AAAGGCCCAGCCTTTTGGATAACTCTATAGGGAATGAAGCCCCGGCCTCC
ATACACGGACCCTTCCACTTCTAGGCCCCGTTGTTCACTCCTCCAACCAT
CACCAAAACTTATAATGAGAAAACATCCACTGACACCAAACTGCATGCCA
TCCACGGACCCTTCCACTTCTAGGCCCCGTTGTTCACTCCTCCAACCATC
ACCAAAACCTATAATGAGAAAACATCCACTGACACCAAACTGCATGCCAT
CCACTTGCCAGTCGCCCCCCACCCCTCCCCCTTCACCCCCTACCTCCTCT
GCCCCACAGAATGCACTTGCCTCGCCGATGTAAAAATGCAAGAAGGGACA
AATAAACAAAATAGGTGCACTCTAAGATGAACAGCTACTTGATCCATCGG
AAGCTCGGCTTGCGGTTTCTCACTCGGCTTCATCTCGAGGTGGCACACCT
CCTGCCCCCATCAATCAATGCTACTTAAATTGGGACTATAGTTAGCTGTG
TATTACTATAGGACCTGCACCTTTCTTCATCGATTTAGACCTAATTTGTA
CAGGGCACACTGTGGACCCATATCCATCCAACAAAAAAATCATTCTCAAC
AAATGAAAAAAAGGTGCTCCCCGAGGAGCGGCTGCAGAACCTGATGGTGG
AGGTGAAGCAGTCGGGGCTGCCCGCGGCCGTGATCTTCGGCGCGCTGGCC
CCCGCGGACAAGACGCACCTGCCCCTGGTGTGTGTGGTGTGTGTGGGGGA
GGCCAAGCGCGGGGGGCCCTCGCCTTCGGCGCGGCGGGTGCGAAAGTGCA
CGGCAAGGGGGGGAGGGAGAGGGCGGGCCGGCGCGGCGCGGCGCGGCGTG
GGAGCCCCCTCCCCCCCCCCTCCGGCCCCCGGCTGCAAGACGGCGTGGAT
GGGGAGGGGGGCCTTGCTTGCCGCGTCGTTGGGCGTGGCTTCCGATTGAT
ATGAGTGCCCCCTCTGCGGCCGATGTCGTCTTTGTGCCTTCTGAAGACTT
TGGGGCTTGTTTCAATTGGTAGCACAGCAATGCTTCATTGGTGTCCAGTG
TCCCCACCCCCCCCATCATCACTAAACTCAACAGGATATACCAACTGTAC
ACTTTTGTCTTTGAAATTGAGTTTGTACAATGAGATGTTCATAATACCAT
GTATGGAAGCTAGGGTTTCTGCCCCGAAAACGGTTTGAAAGGCTAGACTT
GAAACTAAAATTAACATCATCATGATCATCATCATCATGGGACTAGTATG
GCCACAACTATAGGACCGTTAAGCTTAGTCACTGCATTGTAGAAGCACCA
TCATGATCATCATTATCGTGACGTATTTACTGTATCACAGGTAGACCACA
GAGCTACGTCATATATATCCTCTCTCCTCCCCAACTCATAATACGACCGC
AGCACCAGTGGGTTGGGGCTCTGCGCGACCTGAACCGGCAGGCGTTCTTC
CCCCTGACCGAGCCGGAATGCGCCGAGGTGGGTGGGTTGGCCGCCCTTGA
CCTCGCAGGAAGACCTCTCCTCGCAGGAACCGGGGTCCCCGCCACACAGG
CGGCCTCCCCGGCTGACCCCCCCCCGGTTTCTCCCCATCCTGCTGCTTTG
CCTTTCTGCTGAGGGACACTTGGGGTGGCAGCTCCCTGCTGAAAAGGAAA
CAGAATCACTCGACGAGGTACAGCCCCCAATCCCACCGGCCGGCACCGCC
CCCTCGCTCGCCTCACCTCCCCCTCTCTGCCGCCTTGACCGTGCCCAATT
AAGGCATGCTAGGAGGGAAGGAGGGGCATAGTCAATAAACTTCATAAAAC
TGCACGCAAACGACCACGGTGCAGTTGCACAATTTTTATTTATTTATATT
TATTTTTGGTTGACAAGAAGAGGCAACGCGGACAAGAAGAGCGCGGGGCG
CCAAGCGCAGTCCGTCGCGCGCGTAAAGATGAAGTAAATGGTGTTGATTC
TCCAGCGCTGGTGGTGGCAAACTCTTCCTTGTGTCAACTCTAAGATGAAC
AGCTATATGATCTAGCGGATGCTCAAGCTTTGTGGTTTTCCACTCGGCTT
CATCTCGCGGTGGCACACCACCACCACCTGCCCCCCCTAATTGTTTTTAA
AATTATTATTACATTTTTTTTAGCATTTTTTAAGTGACAAAAAATGCTCG
TTGTAACTGTTGCTAGTATACCTCTGCCCATCATCGTCCAATGTGTGTAT
AGCTGTCTTCTAAGAGAAAGGTATCCTTGTACATGCTGATGATCAAGGAC
CTGTGCGGCGAATCAACATGGACAGATGAGTGGATGATAGATGCCCGTTT
GGCAGGAGTGGACGCACCAGCTGGGGCTGGACTAAGGGGTGGGGGTGGGG
AGGCTTGCTTTTTTTTTTTTTTGTATACGTTCTACTTGCATTGCGCCCCT
TCACATCCTGAGCCACACAACCACCGTCTATTTGCAAGTTGCTTTGACAT
CTGATGCACTTCTTTGGATCAAGTCTGATAGCTGACTAACTTTGGAAGTT
CCAGCTATCCTTAACCCTACATGCTCTATTGCCCTTTGGCCTCATTGCCC
TCTTTCAGTTGTCTCTACTGTAGACGCTGCTTCCGACAACTCACATCCAT
CGACGAGTGCATCTTCTCCTTCCCGTGGGTCGAGGGTGTATCATCTGGAC
AGATGCAGTCACCCTCTCGTTTCAGAGCACGACTGCTCCTTCCTAGCCCA
ATTTTCCAGCTTATGGAATGTAACTTCCACAAACCGGCCTCATGAACAGT
AGTTGATATATTCATGTTTCAGCGTTCGCCACTTGTGATGGATCATCGAA
CGCCTACAGCTATTGCGAGGACAGTTCGCTAAGCTCCCAGTGATATCCGT
CTGTTCCCCGAACCGAACCAGACAGGATACCTCCGAGTAACACGCCAACG
ATGGAATCAGTTCCGCCAAACCGGAGAAGCCCGAAAGTGCCAGACAATGC
CGATGTCCGAAGACGGAGGCTGATGTCGCGCGACACAGATTCGAACCCGG
ACCTTACGGTTGGAAAACTCACATTCTACCGCTGTTATGCCAATCAGGGG
TGGGGCAAGCTGGGGATGAAGAAGGGGTAGTATGTGGGGTAGTATATTTG
GTGTTGCAACAGAGGGCCAATGATACATGGACAGTTTGTGGTGTGAGAGT
TTTTCTGCTTGTGTTCTTATGATGATTTGAGTAGTGGTATTGTGAAATGT
GGCAGATTGAGGTGGAAGGGTATGCTTATAGAAGCTAGGGGTTCTGGCCC
GAAAGTGATTTGATCGGCTAGACTTGAAACTAAAGTCAACATCATCATCA
TGTTGCTGTTCCTCACATAGTATGGAACTTGTCAGCTATGACTATAATGG
GACCTGCATCATTCCCTACTGATTCAGACCTACTTTGTAGTATAGGGCAT
ATATTGTGAGCACATTTAACCACTTAGGGACTCAAATTATTCACAAATGT
TAACTGATGATAATTTTGTAGCTTTTTGGAGAAGAACTCAAAAAAATGAC
AAAAAAATAATAAAAAAATAAAATAAAAATAAAAATGTCACCAGGTGGCG
AAGCTCCTGTTCCACGTGCCGGCGGAGGGCTTTGAGGGGGACAGCTACGT
GCACTGCGAAACCTTCCGCGAGTGGTAAGTTGCGGCGCCGGGCTGGGTGT
ATACTTTTTGGTTTTGTTTTTGTTTTTGTAATAACGGAGTATATACCACC
ATGCTTTTTTTTTTTTATTGCACCGGTCCGACTTACTCGCGGGATCGCTC
CGTCGGGCGTGGCGCGTTTCCGGGTCTGGGGCCGCCTGGTCCGCGATCGT
TCTCGTCTCACGACGTCAACGTTCCCCCGCTAATCCATGAACATGAACAT
ATATTATATCATGAAACAACAACAAAATAATAATAAAGCAGTGATCATCC
AACAATATAAAACCAAATATAATATATATAGTATACTACTGCACTATGCC
TGACACCACTCCCGAACTAAAGAAGAAAACCCCTCCCACACCCTTAAAAC
ACCCTGCATAGCCCTGCTCCATCACTGAAACCCGCCCCATGAAACCTCAT
CCTAGACCCCCTAAGCCTCAATCCACCGCCCGGATCAGTGCAAACTGCAA
TTTAATTTCCACCCAACACATCACCTCCTCGTAGGACTTTCCCCATTTAC
CAGCCAGCACAGCTGCCACCCTCTTCATAAAGGCAACAAACTCTCGGTGG
AAAACCCCGTCCACTGTGCACACCAAGGGTGTGAAGAAGCTCCCAGCCAT
CTCCTCACAGCGCTCCAGGTATCTTGTCTTCTTCTCCTGCACTGCGGCAC
GCATGGCAGTGACATAGCTTGTGTTGCGGTCAAAACGAGAGGGTGCGCCA
GCATCCAAAATGCGCTTATCGAAAAACGCCACCCTCTGCCTCTCCCACAC
ACCAATAGCCAAGAAGTCTGCACGGAGGTCCTTGTCCCGCACATTGCCAC
TGGCATCCCTCAGAAACGGCTCCTTCTTCACCCCCGCCGCCCCATATACT
TCTATTCACCTGTGGCTCCATTGAAATGGCACCCACCGAGAGGGTTTTGG
CTCCAAACTTAAGGCTTGGCGCACTATGATGAGACTTGAGCTTTGTCGAT
AGCGCAGTCTAAATTGGTTTTTGTGGCAGTCTCTGTCAAGACAGGGGTTA
TAACCATTTTTTCTTCTACTTTGACATGAATGTCTTTGACGTGGAGCAGA
TCTGGCACACTGGTCCAGGCTCGCTCAAATCACACAAAACATCCTGGGGT
GCAGAGTTCAGTGATTGCGCCTATAGGCGGTGCTGTTTTGGCGAGCAACA
AGGGCCAAAGGCGGATGACTATGCCTTGGCGGGTGAAGTGATGCGGGAGG
TGGAAGCCGGGCACTCTTTTGTGCGTGTTCCAGGGCATCAGGGCCATACA
TGCAATGAGATGGTAGACACCCTGGCAAAGGAGGCGAACAACAGTGGGAA
GAGGGTGAAGGTGGCAATCCCAAGAGCGCACACGCGGCGGTTGCGCAGGG
AGAGGCCATGGCCTATAAATAAAATCTTAAGGCGTTTGATTGGCTATAAA
TAAAATCTTAAGGCGTTTGATTGGCTATAAATAAACATTAAGGTGTTTGA
TTGGCTGAGAAGTGGAAGGGTCCCTTTACGGAGGCCGGGACTTCAGTCCT
TGTTGTAGTCATCCAAGTGACAGGAGCTTCTTAATTATTAAACTAAAATC
GTCGTCATCACCATCATCACCTTCATCATCATTTTTTGTTTTGTCTACGT
TTGTACCATGCAATGTGCTCCTCTCACTTCCTGAGCCACCCAATGTCTTC
TTGCACGTTCCTTGGCTTCTGAGTACTTTGACAGACATGCTATTATTATT
ATTGGCTGGGGCTTTGGTCCGTAAGGTTTTACCAAGAGGCCGGATAGTGG
TTGGCCCTGGCAAGCAGGTGTGTGCCCCCCGGGTCTCTGATGTGGCCATT
TTGGTGTACAGGCGTGATAGTAGTTGGCTGCGGACAGTAGTTGTGGTAGG
GTGTGCAGGTGGGTGGGTGGTGCGCGGACTGCTGGTGCAACCCAACACAT
CTCCTACCAGAATGCCCTCAATGCCTCTGCCCGTGAAAAGGTGAAGAGGT
ACAAGGCTGCTGCGGAAGAGCGCCGTGCTGCTTTCTGCCCCTTGATAGTC
ACTGTGGAGGGTATTGCTCACCAGTCCATGCAGGCCTTCCTCAGGTGAAT
TACTGCCCGGCTCTCGGCAAAGTGGCAGAAGCCTCTCTCAACTGTCAGCA
ACTGGGTGCGTGTCCGCGTGCAGTTTGCGCTCATAAAGCGGTGGATGTGC
ACACCAGGGGCTCCAGCAGGAAGAAGTGGAGCTTAGGTTATTGCACACTG
ATGTGCTCCAATAAGAGCGAAGGCCAGACTGTGTTGCATACCTACACATG
GACAAAGAAGCCATTGTTGTCATTCTCAGTCCGCACGCTATACTGATGCT
GCTTTGCTCTATCAGTGAACCGTTGTGCAGTCTCCCCAATGTAAGGCACA
CCGCATTCTCCACAATCCACCTTGTAGACCACATCTTTGCGCTGCAGCCT
GTCTCTGGGAGGTTTTAGGTCGCACAACTCACTCTGCAATGACACTGGCT
TTGTGAACACTACCTCTACCCCATGGGCGCGCACCAGCTTGGCGGACCTT
TCGGAAAAAACAGGCACAAAGGGAGCAAAAACGGTAGGCTTGTCTTCCTC
CTCCTCCACCTCCACCCCAGGCACATAAGAGGCAAACACCCTGTCCACTT
CACGCACAGGGTATCCATTTGAGATGAACTGGTCCTTGAGAAAACCCAGC
TCCCACCTCAGATCCTCCTCCCGGTCGCACAGCCGATGAGCTCGATGGAT
GAGGCACTTCATCACCCCCAGCTTGGTCTTCTTGGGATGATTTGACCTCC
AATGCAGGAGGTACTGAAAGGTGTGCGTCTCCTTCCGATACACGCTGGTC
ACCACCTTCTCCCCCACCCCCTCCATCTTCAGGTCCAGAAAAGCAAGCAC
CCCGTTCTTCTCTCTCTCCATAGTGAACTGGATCCGCTTCTCCTGGCCAT
TCACATGGCTCAAAGGCTCCTGTAGCTTCTCCTTCCCATGGCCCCAAATG
ATGAACACATCATCCCTCATCTTCACCCACAGGGTGGGCTTGTGCTTGCA
CCTGTCACTATCTAGATGAACTGTTCTTCGAACCAGTTCAAATATACCTG
CAATGGAACGAGATGAACTTGCCGATAGGAGTCCCATCAGACTGCGTGAA
GATCCGCCCATCAATTGTCTTGAACTAGTCATTAAGACGCAGCCTGAACA
TATAACTTGCGCAGTCCAACTTAGTAAGAAAGAGGCGCGGGCGAAGGAGG
AGGCGAGGAAGGACAGCCAGCTTCAGCACTAAACCAGGGCCAGAGCTATA
AAGAGGGCGGGAAATTTTGTCTCAGTGCCCGTGGTGCGTAAATAGCTATT
ACCTAATTTATTTAAGGTCCAGCCGCTCGGATAACTACAAGGGCTCAGGA
TGTGAGAGGAGCGCATTGTACGTGAAACAAACATAGAAAAAAAACTACTA
CAATCATTTTGCCATATGATGATGATCAGCCGCGGAAAAATAGGAAAATA
TTAGCTGTACACCGCTCGGGTCACGGGCGCGAAGCGCCCGAAAGTCCCCC
CGCCGCACGCTGCAGGTTTGGGTGATTGAAAAATGCGATTTTGAATGATT
TTTTTTAACGGTTAGACAATAGAAACTAGGTTATGGAAAGCAACAAGATC
CCCATAGTTTGCCAGGAGGAGCTCGCGCAGTCCTTCTATTTAGCAATTTC
TTTAAATTTTCATGGTGAAATTGAGTTGCCGTGCAAAACGAATTGAAAAC
AAGTATTCTTCAGATTTCTTTGGTGTCCTGCATCCATCTTTTCACAAACA
TTTCGGCGCATTTTCAATTCCATGGTTTTTTGATAGGAAGCAGATTCACA
AGATTGCTCCTGTCCTCAAAGGAGATAAGCAGTACAATGCACCGCAAATT
AAAAAAGTGCAAAACAACAACAACAAGAAGAAATATAGGTTTCAAAGATA
ACGCTCAGCCTATACTAATTTCCAATTCCATGGTTTTTCGCCTCAATTGT
ATGTGTTACTTTTCTATTTAACACGCTCCATAAATTTAGCTTTTGGGAGA
CATAGACCAACTCATCGGGTTACCGGACTTTTCTTTTCTTTTTCTTCAAA
ATATTTCCGGTGCAAAGTTCATTTTGCACCCAGGTTTCGGCGCGGCTGAT
GATGATGATGATGTCAATTTTGGTTTCAAGTCTAACCTTTCAAACCGCTT
TCGGGGCAGACCCCCTAGCTTCTATTTAAGCAGACCCTTCCACCTGTATC
TGCCGTCTCTTTTGCCACAGCAGGTATGTACCCCACCCTGGCCCGCCCTA
GGTGCTTGCGGCATGCCTCTTGTTTGCGTACCGTAGTCGGCGTTGCCGCC
CCCGCCGCTCCCTCAGCGCGCCGCCCGCTTGCCCACCGCGCCACTGCCGC
GCCTCCTTCCCGCCCTCGCGCGCGCGCGCGCGTGTCGCGCCAGGTGCCAC
GACATCAAGCACCTCAGCTGGCGCGCGGAGAAGCGGCG
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1:5595914..5606001-

>mRNA_H-akashiwo_Contig1.142.1 ID=mRNA_H-akashiwo_Contig1.142.1|Name=mRNA_H-akashiwo_Contig1.142.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=408bp|location=Sequence derived from alignment at H-akashiwo_Contig1:5595914..5606001- (Heterosigma akashiwo CCMP452)
GCGCTGTTGTCACCGTCAAAAGCGGCGGGGCTCAGCGCTGTGCCGGAGGA
CGACCTGAGCCGCACCCTCAAGCGGGCCGCCCACTTCCGCGATGAGGTGC
TCCCCGAGGAGCGGCTGCAGAACCTGATGGTGGAGGTGAAGCAGTCGGGG
CTGCCCGCGGCCGTGATCTTCGGCGCGCTGGCCCCCGCGGACAAGACGCA
CCTGCCCCTGCACCAGTGGGTTGGGGCTCTGCGCGACCTGAACCGGCAGG
CGTTCTTCCCCCTGACCGAGCCGGAATGCGCCGAGGTGGCGAAGCTCCTG
TTCCACGTGCCGGCGGAGGGCTTTGAGGGGGACAGCTACGTGCACTGCGA
AACCTTCCGCGAGTGGTGCCACGACATCAAGCACCTCAGCTGGCGCGCGG
AGAAGCGG
back to top