mRNA_H-fluviatilis_contig104010.836.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: A0A6A7G2S9_9CRUS (Uncharacterized protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G2S9_9CRUS) HSP 1 Score: 171 bits (432), Expect = 5.000e-46 Identity = 89/187 (47.59%), Postives = 115/187 (61.50%), Query Frame = 1
Query: 1 GNIPLPRNCHSITTMINKFYLVGGYGTGSRG-SSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGGFSFDGQWLSDIHVLDTGRLSILELNCAEYVQPFFPKVVAQSQS-----KLALSMMMWYQPEISGLFNHEKTPAGMPPCPRAAHSATVVDHRLFIFAGNDGISLFNDLHILD 543
G +P RNCH+ T + NKFYL+GGYG SSE+++ D HW RP+V G VP ERYSH+C A+G+ L+LFGGFS D +W++DIHVL+T EY Q F P + + + KL+ M++WYQPEISG PPCPRAA SA V ++F F GNDG FNDL++LD
Sbjct: 138 GPVPTHRNCHTATVVGNKFYLLGGYGNQHTSKSSELVILDIEIRHWSRPLVVGRVPAERYSHTCVAIGTNLILFGGFSVDSEWMNDIHVLNT-----------EYKQQFIPSIGLGNANGSDLEKLSQPMLIWYQPEISG----------DPPCPRAACSAVVHGTKIFYFGGNDGSLFFNDLYVLD 303
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: X6LZU4_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LZU4_RETFI) HSP 1 Score: 159 bits (402), Expect = 5.230e-42 Identity = 84/185 (45.41%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 1 GNIPLPRNCHSITTMINKFYLVGGYGTGSRGSSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGGFSF-DGQWLSDIHVLDTGRLSILELNCAEYVQPFFPKVVAQSQSKLALS-MMMWYQPEISGLFNHEKTPAGMPPCPRAAHSATVVDHRLFIFAGNDGISLFNDLHILDFR 549
G P PRNCH + YLVGGYGTG+ S ++LV D A HW RP+V G+VP ERY+H+C +VG+ L +FGGF G+WL+D+HVLDT EY Q P + A + + S M++WYQP+ +G PP RA+H+A V++H++FIF GN+ LFNDLH+LD R
Sbjct: 214 GVTPRPRNCHCTCLVDKSVYLVGGYGTGNT-SIDLLVTDIAVQHWYRPLVGGVVPSERYAHTCVSVGTYLFVFGGFCVVSGKWLNDLHVLDT-----------EYKQELVPSLSAYGATSIQQSPMLVWYQPQFTG----------EPPVCRASHAAAVINHKMFIFGGNNNQKLFNDLHVLDTR 376
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: A0A0G4IZ57_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IZ57_PLABS) HSP 1 Score: 150 bits (378), Expect = 3.830e-39 Identity = 80/187 (42.78%), Postives = 107/187 (57.22%), Query Frame = 1
Query: 1 GNIPLPRNCHSITTMINKFYLVGGYGTGSRG---SSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGGFSFDGQWLSDIHVLDTGRLSILELNCAEYVQPFFPKVVAQSQSKLALS---MMMWYQPEISGLFNHEKTPAGMPPCPRAAHSATVVDHRLFIFAGNDGISLFNDLHILD 543
G IP PRNC +T + + YL GG+ R S+E+L Y+ W RP+ AG +P R++HS S VG QLV+FGG + DG+WL+D+HVLDT E+ QPF K A + LS M +WY PE SG PC RAAH+AT + ++ +F GNDG+ LFND+HIL+
Sbjct: 138 GTIPSPRNCGMLTAIDDNIYLTGGFCAEHRAGMSSAELLSYNLPTETWSRPLCAGSIPCSRFAHSSSVVGKQLVVFGGCTGDGRWLNDVHVLDT-----------EFEQPFVSKSAAAKHTWKQLSPQTMFLWYAPETSGA----------KPCARAAHTATTIGTQIVVFGGNDGVRLFNDIHILE 303
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: A0A0L9TRV5_PHAAN (Uncharacterized protein n=26 Tax=Phaseoleae TaxID=163735 RepID=A0A0L9TRV5_PHAAN) HSP 1 Score: 84.7 bits (208), Expect = 8.030e-16 Identity = 60/175 (34.29%), Postives = 88/175 (50.29%), Query Frame = 1
Query: 58 YLVGGYGTGSRGSSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGGFSFDGQW-LSDIHVLDTGRLSILELN------CAEYVQPFFPKVVAQSQSKLALSMMMWYQPEISGLFNHEKTPAGMPPCPRAAHSATVVDHRLFIFAG------NDGISLFNDLHILD 543
Y+ GGYG + ++++ V+DT W +P+V G P R SH+C+A+G L +FGG DG L D+H+LDT S LN + + ++ ++ K L++ W P I G E PA R HSA VV RLFIF G ++ +NDL+IL+
Sbjct: 43 YVFGGYGKDNCQTNQVHVFDTVKQTWSQPIVKGSPPTPRDSHTCTAIGDNLFVFGGT--DGMNPLKDLHILDTCESSFSYLNHPPIFVFKSHNLCIYLFTISLTEVKSWLALHTWVSPTIRG----EGPPA------REGHSAAVVGKRLFIFGGCGKSADSNNEVYYNDLYILN 205
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: UPI0019298492 (tip elongation aberrant protein 1-like isoform X1 n=2 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0019298492) HSP 1 Score: 67.0 bits (162), Expect = 1.050e-9 Identity = 57/203 (28.08%), Postives = 96/203 (47.29%), Query Frame = 1
Query: 10 PLPRNCHSITTMINK--FYLVGG-YGTGSRGSSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGGFSFDGQWLSDIHVLDTG------RLSILELNCAEYVQPFFPKVVAQSQSKLALSMMMWYQPEISG---------LFNHEKTP------AGMPPCPRAAHSATVVDHRLFIFAGNDGISLF-NDLHILD 543
P R H++ ++ N Y+ GG YG S+++ V+DT W +P+V GI P R SHSC+ VG++L ++GG L D+H+LDT + L+++ + + +V + +L + ISG + + EK G PP PR +H+ + +R+ + G D + +D+HILD
Sbjct: 82 PGQRWGHTLNSVKNGRLIYVFGGFYGPEKCHSNDVFVFDTVKKTWSKPMVKGIPPSPRDSHSCTTVGNRLFVYGGTDGTNP-LDDLHILDTSINTWIPSPADLQVSGPDAREGHSAALVGK---RLFIFGGCGKSNNISGGQVHYNDLYILDTEKLKWEYAMTTGHPPSPRDSHTCSSWKNRIIVLGGEDSSDCYLSDVHILD 280
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: D8TFE2_SELML (Amidohydro_3 domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TFE2_SELML) HSP 1 Score: 66.6 bits (161), Expect = 1.350e-9 Identity = 54/185 (29.19%), Postives = 87/185 (47.03%), Query Frame = 1
Query: 16 PRNC---HSITTMINKFYLVGGYGTGSRGSSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGGFSFDGQWLSDIHVLDTGRLSILELNCAEYVQPFFPKVVAQSQSKLALSMMMWYQ----PEISGLFNHEK-TPAGMPPCPRAAHSATVVDHRLFIFAGNDGISLF-NDLHILD 543
P C H+ + N Y+ GG G ++++ V+D W +PV+ G P SHS +AVGS+L +FGG + L D+ VLDT +++ E K +A+ S S + P+ F +K + G+ P PR +H+ + + + G DG + + ND+HILD
Sbjct: 16 PPGCKWGHTCNAVRNLIYIFGGCGQDECQTNDVHVFDFGMYTWSKPVMKGTHPSPWDSHSSTAVGSKLYVFGGTNGTSP-LDDLFVLDTATNTLVMFLLRE-------KDIARLSSVTTCSCLGDVGNPAIPQRRNTFVWKKISTTGVSPIPRDSHTCSSYKNCFVVMGGEDGGNAYLNDIHILD 192
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: UPI0011E9F799 (rab9 effector protein with kelch motifs-like n=1 Tax=Archocentrus centrarchus TaxID=63155 RepID=UPI0011E9F799) HSP 1 Score: 63.5 bits (153), Expect = 1.580e-8 Identity = 52/205 (25.37%), Postives = 89/205 (43.41%), Query Frame = 1
Query: 1 GNIPLPRNCHSITTMINKFYLVGGYGTGSRGSSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGGFSFDGQWLSDIHVLDTGRLSILELN--------CA-EYVQPFFPKVV-------------AQSQS---KLALSMMMWYQPEISGLFNHEKTPAGMPPCPRAAHSATVVDHRLFIFAGNDGISLFNDLHIL 540
G + L H + + Y+ GG G+ + +++V++T W +G +P + SC+ VG Q+ +FGGF G + D+ VL T L +L C+ + + K + A S S KL+++ M W P L+ G+PP R H+A ++ L++F G + FNDL ++
Sbjct: 127 GGVALRALRHCSAAVGDNIYVYGGTVAGNP-TDDLIVFNTVSLTWTPVRTSGSLPPALWGQSCTLVGDQVFMFGGFGAGGDFCKDLFVLSTENLQWQKLEVKGESPAACSGQTLTAHHDKDIYLFGGRSTNEDGTATSSSEIYKLSIAKMKWKVP----LY------VGIPPARRHGHAAFILHSHLYVFGGRNEEQKFNDLKVM 320
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: A0A6J0MAS2_RAPSA (rab9 effector protein with kelch motifs-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0MAS2_RAPSA) HSP 1 Score: 61.6 bits (148), Expect = 6.830e-8 Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 97 SEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGGFSFDGQWLSDIHVLDTGRLSILELNCA-EYVQPFFPKVVAQSQSKL 360
+++ + DT W+R + G P ER H+CS ++++ GG FDG +LSD+HVLDT + +L + E + P V +SKL
Sbjct: 157 NDLYILDTETITWQRALTTGTRPFERDGHTCSTWNKKIIVLGGEHFDGDYLSDVHVLDTATFAWKQLKTSGEVLTPRGGHVTVAIESKL 245
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: A0A2P2LA41_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LA41_RHIMU) HSP 1 Score: 60.1 bits (144), Expect = 7.350e-8 Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 58 YLVGGYGTGSRGSSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGG 225
Y+ GGYG + ++++ V+DTA W +PV+ G P R SHSC+AVG L +FGG
Sbjct: 48 YVFGGYGKDNCQTNQVHVFDTAKRTWSQPVIKGTPPTPRDSHSCTAVGDNLFVFGG 103
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Match: A0A2P2LA56_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LA56_RHIMU) HSP 1 Score: 60.1 bits (144), Expect = 1.140e-7 Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 58 YLVGGYGTGSRGSSEILVYDTAGNHWERPVVAGIVPVERYSHSCSAVGSQLVLFGG 225
Y+ GGYG + ++++ V+DTA W +PV+ G P R SHSC+AVG L +FGG
Sbjct: 48 YVFGGYGKDNCQTNQVHVFDTAKRTWSQPVIKGTPPTPRDSHSCTAVGDNLFVFGG 103 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig104010.836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig104010.836.1 >prot_H-fluviatilis_contig104010.836.1 ID=prot_H-fluviatilis_contig104010.836.1|Name=mRNA_H-fluviatilis_contig104010.836.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=183bp GNIPLPRNCHSITTMINKFYLVGGYGTGSRGSSEILVYDTAGNHWERPVVback to top mRNA from alignment at H-fluviatilis_contig104010:8..780+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig104010.836.1 ID=mRNA_H-fluviatilis_contig104010.836.1|Name=mRNA_H-fluviatilis_contig104010.836.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=773bp|location=Sequence derived from alignment at H-fluviatilis_contig104010:8..780+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig104010:8..780+ >mRNA_H-fluviatilis_contig104010.836.1 ID=mRNA_H-fluviatilis_contig104010.836.1|Name=mRNA_H-fluviatilis_contig104010.836.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1098bp|location=Sequence derived from alignment at H-fluviatilis_contig104010:8..780+ (Heribaudiella fluviatilis SAG_13_90)back to top |