mRNA_H-fluviatilis_contig10394.812.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
|
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: UPI001C7213AD (bromodomain and WD repeat-containing protein 3 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C7213AD) HSP 1 Score: 123 bits (309), Expect = 2.770e-28 Identity = 69/185 (37.30%), Postives = 100/185 (54.05%), Query Frame = 1
Query: 7 VRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGNWA-------SNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMKL-VLTGFNGKPYAQQ 537
+R+ WT D RV+TA SDF +++W N + L F L H D V V+ PHP D R+ S +DGR+ILWD++ G V++ HF+L +G+ A +GL FA+T G L +F GS Y P QF+ DY+PL D++ + +D++TQ PH + L +G PY Q
Sbjct: 431 LRVTMVGWTLDDSRVITAVSDFTIKIWDSN------SGNLRFILKGHEDEVFVLEPHPIDPRIFLSSGHDGRIILWDLVTGTVIK--NHFNLIEGQGHGAVFDCKFSPDGLMFASTDSHGHLSIFGFGSADRYKKVPEEQFFHTDYRPLIRDIHHHVLDEQTQTAPHLLPPPFLVDIDGNPYPPQ 607
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: L8GQR8_ACACA (Bromodomain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQR8_ACACA) HSP 1 Score: 121 bits (303), Expect = 1.650e-27 Identity = 67/180 (37.22%), Postives = 94/180 (52.22%), Query Frame = 1
Query: 4 PVRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGNWASNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAM-KLVLTGFNGKPYAQQP 540
P+ + A W+ D + V+TA SDF ++VW T L L HT+SV V+ HP D R+ S DGRV WD+ +G V+ ++ +G++A NG FAA+ G ++ G Y P QF+ DY PL D+N +D+ TQ PPH M K +L +G PY QQP
Sbjct: 247 PIIVTMALWSLDDQYVITALSDFTIKVWDAK------TGALVHTLRGHTNSVYVLDSHPVDPRIIVSAGYDGRVTFWDINKGEAVQSHKNADRQLFDGHFARNGAYFAASDHEGFYTLYGTGPTQKYQSVPVEQFFETDYHPLLRDLNHWVLDEATQLPPHRMPKPLLCTIDGVPYKQQP 420
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: A0A087TWC1_STEMI (Bromodomain and WD repeat-containing protein 3 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TWC1_STEMI) HSP 1 Score: 117 bits (294), Expect = 2.300e-26 Identity = 68/182 (37.36%), Postives = 99/182 (54.40%), Query Frame = 1
Query: 7 VRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGNWA-------SNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMKL-VLTGFNGKPY 528
+R+ WT D +VVTA SD ++VW S TG LC L H D V V+ HP D R+ S +DGR+I+WD+I G +++ HF+L +G+ A +GL FA+T G L +F GS Y P QF+ DY+PL D++++ +D++TQ PH + L +G PY
Sbjct: 430 LRVTMVGWTLDDSKVVTAVSDSSIKVWN---SYTG---SLCNILKGHEDEVFVLEAHPTDPRVFLSSGHDGRIIIWDLITGTIIK--NHFNLIEGQGHGAVFDCKFSPDGLMFASTDSHGHLSIFGFGSNDRYKKVPEEQFFHTDYRPLIRDIHYHVLDEQTQMAPHLLPPPFLVDIDGNPY 603
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: A0A4Y2H861_ARAVE (Bromodomain and WD repeat-containing protein 3 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2H861_ARAVE) HSP 1 Score: 116 bits (291), Expect = 6.860e-26 Identity = 77/239 (32.22%), Postives = 118/239 (49.37%), Query Frame = 1
Query: 13 IVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGNWA-------SNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMKL-VLTGFNGKPYAQQ-----PGQD------ATPRTATRSAASSD---PSIIRTFLEPLPMIADVTDNLKSE 663
+ W D ++V+TA SD ++VW S TG L F L H D V V+ P+P D R+ S +DGR+ILWD++ G +++ HF+L +G+ A +GL FA+T G L +F GS Y P QF+ DY+P+ +D+N + +D++TQ PH + L +G PY PG++ P A + S+ P + L P I D+ + L+ E
Sbjct: 427 VTMVSWALDDDKVITAVSDHSIKVWN---SYTG---SLIFCLKGHEDEVFVLEPNPTDSRVFLSSGHDGRIILWDLVSGTIIK--NHFNLIEGQGHGAVFDCKFSPDGLMFASTDSHGHLSMFGFGSADRYKKVPEEQFFHTDYRPVIHDVNHHVLDEQTQTAPHLLPPPFLVDIDGNPYPPNLQRLVPGREHHNDSQLVPYVAVSAEGDSEILQPVRLTNELTDRPTIDDMIERLQQE 657
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: UPI0015AD63F5 (PH-interacting protein-like isoform X2 n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AD63F5) HSP 1 Score: 116 bits (290), Expect = 9.260e-26 Identity = 67/182 (36.81%), Postives = 98/182 (53.85%), Query Frame = 1
Query: 7 VRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGNWA-------SNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMKL-VLTGFNGKPY 528
+R+ WT D +VVTA SD ++VW S+TG LC L H D V V+ HP D R+ S +DGR+I+WD+I G +++ HF+L +G+ A +G FA+T G L +F GS Y P QF+ DY+PL D++ + +D++TQ PH + L +G PY
Sbjct: 430 LRVTMVGWTLDDSKVVTAVSDSSIKVWN---SSTG---SLCNVLKGHEDEVFVLEAHPTDPRVFLSSGHDGRIIIWDLITGTIIK--NHFNLIEGQGHGAVFDCKFSPDGFMFASTDSHGHLSIFGFGSNDRYKKVPEEQFFHTDYRPLIRDIHHHVLDEQTQMAPHLLPPPFLVDIDGNPY 603
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: UPI0015A80FEA (PH-interacting protein-like isoform X1 n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A80FEA) HSP 1 Score: 116 bits (290), Expect = 9.270e-26 Identity = 67/182 (36.81%), Postives = 98/182 (53.85%), Query Frame = 1
Query: 7 VRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGNWA-------SNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMKL-VLTGFNGKPY 528
+R+ WT D +VVTA SD ++VW S+TG LC L H D V V+ HP D R+ S +DGR+I+WD+I G +++ HF+L +G+ A +G FA+T G L +F GS Y P QF+ DY+PL D++ + +D++TQ PH + L +G PY
Sbjct: 430 LRVTMVGWTLDDSKVVTAVSDSSIKVWN---SSTG---SLCNVLKGHEDEVFVLEAHPTDPRVFLSSGHDGRIIIWDLITGTIIK--NHFNLIEGQGHGAVFDCKFSPDGFMFASTDSHGHLSIFGFGSNDRYKKVPEEQFFHTDYRPLIRDIHHHVLDEQTQMAPHLLPPPFLVDIDGNPY 603
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: UPI001EE61CA4 (bromodomain and WD repeat-containing protein 3-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE61CA4) HSP 1 Score: 107 bits (267), Expect = 9.060e-23 Identity = 63/181 (34.81%), Postives = 91/181 (50.28%), Query Frame = 1
Query: 10 RIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGN-------WASNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMKL-VLTGFNGKPY 528
R+ W D E VVTA SD+ ++VW + T L L H D V V+ P P D R+ S +DG +++W++ G ++ F++ +G+ +A +GLSFAA G L +F GS Y P F+ DY+PL D N +D++TQQPPH M L +G PY
Sbjct: 435 RVTMVAWMMDDEHVVTAVSDYSLKVWASH------TGRLVHVLESHQDEVFVLEPSPIDARILLSAGHDGNIVIWNLQTGNKIKTF--FNMIEGQGHGAVFDCKFAPDGLSFAAVDSHGHLLMFGFGSNEKYQKVPKEVFFHTDYRPLIRDANNYVLDEQTQQPPHLMPPPFLVDIDGNPY 607
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: UPI0006B0796C (bromodomain and WD repeat-containing protein 3-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0796C) HSP 1 Score: 106 bits (264), Expect = 2.580e-22 Identity = 62/184 (33.70%), Postives = 95/184 (51.63%), Query Frame = 1
Query: 7 VRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGN---------WASNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMKL-VLTGFNGKPY 528
+++ W+ D V+TA +D ++VW S TG + L+ H D V V+ HP D R+ S +DGR++LWD+I G V++ + +EG ++ +GL FA+T G + +F LGS Y P QF+ DY+PL D N + +D++TQ PH M L +G PY
Sbjct: 431 LKVTMVGWSLDDSLVITAVNDHSLKVWD---SYTGTLKHI---LNCHEDEVFVLETHPTDTRILLSAGHDGRIVLWDIISGVVIKSF----FNTIEGQGHGAVFDCKFSFDGLMFASTDSHGHISIFGLGSNERYKKVPEEQFFHTDYRPLIRDSNQHVLDEQTQCAPHLMPPPFLVDIDGNPY 604
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: A0A2R5LKJ9_9ACAR (Putative wd40 domain protein (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LKJ9_9ACAR) HSP 1 Score: 105 bits (263), Expect = 3.470e-22 Identity = 59/184 (32.07%), Postives = 96/184 (52.17%), Query Frame = 1
Query: 1 EPVRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGNWA-------SNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMKL-VLTGFNGKPY 528
+ +++ W+ D + V+TA +D+ ++ W N T +L L H D V V+ HP D R+ S +DGR++LWD++ G ++R F++ +G+ A +GL FA+T G + +F GS Y P QF+ DY+P+ D N + +D++TQ PH M L +G PY
Sbjct: 390 QKLKVTMVGWSLDDKMVITAITDYSIKAWDSN------TGKLIQTLTGHEDEVFVLESHPVDSRILLSGGHDGRIVLWDLMTGTMIRSF--FNMIEGQGHGAVFDCKFSPDGLLFASTDSHGHISIFGFGSSDPYKKVPDEQFFHTDYRPVIRDANQHVLDEQTQSAPHLMPPPFLVDIDGNPY 565
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Match: UPI001884B1E2 (PH-interacting protein-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884B1E2) HSP 1 Score: 105 bits (262), Expect = 4.680e-22 Identity = 67/195 (34.36%), Postives = 96/195 (49.23%), Query Frame = 1
Query: 4 PVRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTDSVPVVCPHPFDGRLAFSVSNDGRVILWDVIQGAVVRCIEHFSLSYVEGN-------WASNGLSFAATSDSGALEVFSLGSRAWYYPTPTWQFYVADYKPLQYDMNFNAIDQETQQPPHAMK---LVLTGFNGKPYAQQ---PGQD 549
P+R+ +WT D RV+T SD RVW+ + T L L HTD V VV HP + RL S +DG++++WDV++G V+ F+ EG+ W+ GL AAT G L F + + P QF+ DY+PL D +D++TQ PH + LV N +P A Q PG++
Sbjct: 435 PLRVTMVRWTTDDSRVITTVSDTSFRVWEAD------TGRLLHVLAGHTDEVYVVESHPTEPRLVLSAGHDGKLLVWDVLEGTVLASF--FNAIEGEGHGGLFDARWSPCGLFIAATDSHGHLSHFGVSGSDKFRKVPYEQFFHTDYRPLMRDARHQVLDEQTQMAPHLLPPPLLVDRDGNPQPAACQRLVPGRE 621 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10394.812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig10394.812.1 >prot_H-fluviatilis_contig10394.812.1 ID=prot_H-fluviatilis_contig10394.812.1|Name=mRNA_H-fluviatilis_contig10394.812.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=255bp EPVRIVSAKWTADGERVVTAASDFGVRVWKINFSATGPTSELCFALHRHTback to top mRNA from alignment at H-fluviatilis_contig10394:875..1811- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig10394.812.1 ID=mRNA_H-fluviatilis_contig10394.812.1|Name=mRNA_H-fluviatilis_contig10394.812.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=937bp|location=Sequence derived from alignment at H-fluviatilis_contig10394:875..1811- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig10394:875..1811- >mRNA_H-fluviatilis_contig10394.812.1 ID=mRNA_H-fluviatilis_contig10394.812.1|Name=mRNA_H-fluviatilis_contig10394.812.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1530bp|location=Sequence derived from alignment at H-fluviatilis_contig10394:875..1811- (Heribaudiella fluviatilis SAG_13_90)back to top |