mRNA_H-fluviatilis_contig103663.733.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig103663.733.1
Unique NamemRNA_H-fluviatilis_contig103663.733.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A7S1VBL9_9EUKA (Hypothetical protein n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VBL9_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 8.520e-21
Identity = 41/57 (71.93%), Postives = 50/57 (87.72%), Query Frame = 1
Query:    4 LCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            LCFF+LWLSFTAN+RENAWE GVLRA+GL   QVV +Y+YEA+A++ SSV LGT+IG
Sbjct:  148 LCFFVLWLSFTANIRENAWELGVLRALGLTEAQVVRVYVYEAVALIASSVVLGTTIG 204          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A2P6NVP6_9EUKA (FtsX domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NVP6_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 6.970e-20
Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 1
Query:    1 ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            ILCF +LWLSFTANV ENAWEFGVLRAIGLN   V+ +Y+YEAL ++LSSVF+G+ IG
Sbjct: 1222 ILCFLVLWLSFTANVNENAWEFGVLRAIGLNSGTVIRMYVYEALCLILSSVFIGSFIG 1279          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A0L0T2Z3_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T2Z3_ALLM3)

HSP 1 Score: 89.4 bits (220), Expect = 2.410e-19
Identity = 40/58 (68.97%), Postives = 52/58 (89.66%), Query Frame = 1
Query:    1 ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            +L FF++WLSFTAN+RENAWEFGVLRAIGL+G  VV +Y+YEALAIV++++ LGT +G
Sbjct:  969 LLSFFVIWLSFTANLRENAWEFGVLRAIGLDGSTVVRVYVYEALAIVIATILLGTLVG 1026          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A1Y2HB00_9FUNG (FtsX-like permease family-domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HB00_9FUNG)

HSP 1 Score: 89.4 bits (220), Expect = 2.410e-19
Identity = 42/58 (72.41%), Postives = 53/58 (91.38%), Query Frame = 1
Query:    1 ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            +L FF+LWLSFTAN+RENAWEFGVLRAIGL+G  V+ IYIYEA+AIVL+++ LG++IG
Sbjct: 1053 LLAFFVLWLSFTANLRENAWEFGVLRAIGLDGDTVINIYIYEAIAIVLATIALGSAIG 1110          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A0L0TDZ8_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0TDZ8_ALLM3)

HSP 1 Score: 89.0 bits (219), Expect = 3.300e-19
Identity = 40/58 (68.97%), Postives = 52/58 (89.66%), Query Frame = 1
Query:    1 ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            +L FF+LWLSFTAN+RENAWEFGVLRAIGL+G  V+ +Y+YEALAIV++++ LGT +G
Sbjct: 1367 LLSFFVLWLSFTANLRENAWEFGVLRAIGLDGSTVLRVYVYEALAIVIATILLGTLVG 1424          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A5J4WK30_9EUKA (Putative permease family protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WK30_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 2.920e-18
Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 1
Query:    1 ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            +LCFF+LW+SFTANVREN WEFGVLR+IGL G Q V IY+YEA  +VL  +  GT IG
Sbjct: 1014 LLCFFVLWISFTANVRENGWEFGVLRSIGLTGWQTVRIYVYEATTLVLGCIIFGTVIG 1071          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A058ZC25_FONAL (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZC25_FONAL)

HSP 1 Score: 85.1 bits (209), Expect = 7.450e-18
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 1
Query:    1 ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            I CF +LWLSFTANVRENAWE+GVLRA+GLN   V  +YIYEA +IV+S + LGT IG
Sbjct: 1364 IFCFCVLWLSFTANVRENAWEYGVLRAVGLNAQTVTRLYIYEAFSIVISCLILGTLIG 1421          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: F4Q1A5_CAVFA (FtsX domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q1A5_CAVFA)

HSP 1 Score: 84.3 bits (207), Expect = 1.390e-17
Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 1
Query:    4 LCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            LCFF+LW+SF+AN+ EN+WEFGVLRAIGL   QV  IYIYEAL ++ SSV LG  IG
Sbjct:  777 LCFFMLWISFSANIHENSWEFGVLRAIGLTSFQVTRIYIYEALVLIFSSVILGLLIG 833          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A151ZGA3_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZGA3_9MYCE)

HSP 1 Score: 83.6 bits (205), Expect = 2.590e-17
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 1
Query:    1 ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            ILCFF+LW+SF+AN+ EN+WEFGVLR+IGL   QVV +Y YEAL ++ +S+FLG  IG
Sbjct: 1249 ILCFFMLWVSFSANIHENSWEFGVLRSIGLTAYQVVRVYAYEALVLIFTSMFLGLLIG 1306          
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Match: A0A8J4PTV5_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PTV5_9MYCE)

HSP 1 Score: 83.2 bits (204), Expect = 3.540e-17
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 1
Query:    1 ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSSVFLGTSIG 174
            ILCFF+LW+SF+AN+ EN+WEFGVLR+IGL   QV  +YIYEAL ++ SS+ LG  IG
Sbjct: 1246 ILCFFMLWVSFSANIHENSWEFGVLRSIGLTSFQVTRVYIYEALVLIFSSMILGLCIG 1303          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103663.733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1VBL9_9EUKA8.520e-2171.93Hypothetical protein n=1 Tax=Sexangularia sp. CB-2... [more]
A0A2P6NVP6_9EUKA6.970e-2072.41FtsX domain-containing protein n=1 Tax=Planoprotos... [more]
A0A0L0T2Z3_ALLM32.410e-1968.97Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A1Y2HB00_9FUNG2.410e-1972.41FtsX-like permease family-domain-containing protei... [more]
A0A0L0TDZ8_ALLM33.300e-1968.97Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A5J4WK30_9EUKA2.920e-1867.24Putative permease family protein n=1 Tax=Strebloma... [more]
A0A058ZC25_FONAL7.450e-1868.97Uncharacterized protein n=1 Tax=Fonticula alba Tax... [more]
F4Q1A5_CAVFA1.390e-1768.42FtsX domain-containing protein n=1 Tax=Cavenderia ... [more]
A0A151ZGA3_9MYCE2.590e-1763.79Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
A0A8J4PTV5_9MYCE3.540e-1763.79Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig103663contigH-fluviatilis_contig103663:383..786 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score87.4
Seed ortholog evalue2.5e-15
Seed eggNOG ortholog28583.AMAG_13965T0
EggNOG free text desc.FtsX-like permease family
EggNOG OGs2BZJY@1,2QPZ9@2759,39R3J@33154,3PAYI@4751
COG Functional cat.S
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons3
Model size183
Cds size183
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig103663.733.1prot_H-fluviatilis_contig103663.733.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig103663 383..786 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929088.6110392-CDS-H-fluviatilis_contig103663:382..4291622929088.6110392-CDS-H-fluviatilis_contig103663:382..429Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103663 383..429 +
1691135177.7800279-CDS-H-fluviatilis_contig103663:382..4291691135177.7800279-CDS-H-fluviatilis_contig103663:382..429Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103663 383..429 +
1622929088.6374009-CDS-H-fluviatilis_contig103663:536..5821622929088.6374009-CDS-H-fluviatilis_contig103663:536..582Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103663 537..582 +
1691135177.793338-CDS-H-fluviatilis_contig103663:536..5821691135177.793338-CDS-H-fluviatilis_contig103663:536..582Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103663 537..582 +
1622929088.6580546-CDS-H-fluviatilis_contig103663:696..7861622929088.6580546-CDS-H-fluviatilis_contig103663:696..786Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103663 697..786 +
1691135177.8114681-CDS-H-fluviatilis_contig103663:696..7861691135177.8114681-CDS-H-fluviatilis_contig103663:696..786Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103663 697..786 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig103663.733.1

>prot_H-fluviatilis_contig103663.733.1 ID=prot_H-fluviatilis_contig103663.733.1|Name=mRNA_H-fluviatilis_contig103663.733.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=61bp
ILCFFILWLSFTANVRENAWEFGVLRAIGLNGVQVVMIYIYEALAIVLSS
VFLGTSIGTCA
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mRNA from alignment at H-fluviatilis_contig103663:383..786+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig103663.733.1 ID=mRNA_H-fluviatilis_contig103663.733.1|Name=mRNA_H-fluviatilis_contig103663.733.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=404bp|location=Sequence derived from alignment at H-fluviatilis_contig103663:383..786+ (Heribaudiella fluviatilis SAG_13_90)
ATTTTATGTTTTTTCATTCTGTGGCTATCCTTCACCGCCAACGTGCGGTA GGCCTTTTGTTATGGCAAACCACCCATCTGCTGCCATTCAAACACATTCC GACCTTCCCCGCGTTTCAGTGCGTGTTACGTGATTCCGTTGTTCCGTTGC CTAGGGAAAATGCGTGGGAATTCGGTGTGCTGCGCGCCATCGGCCTGAAT GTAATTACAAGGAGGCTGGTGCTTACACACACCCATGTAGCCTCCCCCAG CACACCTACACCATCCGCGTGTGACGGTTATGACGCCGTGTGCATGCCAT TGCATGTCATGCAGGGTGTGCAAGTGGTGATGATCTACATCTACGAGGCG TTGGCCATTGTGCTGTCGAGCGTGTTCCTCGGCACCTCCATTGGTACGTG TGCC
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Coding sequence (CDS) from alignment at H-fluviatilis_contig103663:383..786+

>mRNA_H-fluviatilis_contig103663.733.1 ID=mRNA_H-fluviatilis_contig103663.733.1|Name=mRNA_H-fluviatilis_contig103663.733.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=366bp|location=Sequence derived from alignment at H-fluviatilis_contig103663:383..786+ (Heribaudiella fluviatilis SAG_13_90)
ATTTTATGTTTTTTCATTCTGTGGCTATCCTTCACCGCCAACGTGCGATT
TTATGTTTTTTCATTCTGTGGCTATCCTTCACCGCCAACGTGCGGGAAAA
TGCGTGGGAATTCGGTGTGCTGCGCGCCATCGGCCTGAATGGAAAATGCG
TGGGAATTCGGTGTGCTGCGCGCCATCGGCCTGAATGGTGTGCAAGTGGT
GATGATCTACATCTACGAGGCGTTGGCCATTGTGCTGTCGAGCGTGTTCC
TCGGCACCTCCATTGGTACGTGTGCCGGTGTGCAAGTGGTGATGATCTAC
ATCTACGAGGCGTTGGCCATTGTGCTGTCGAGCGTGTTCCTCGGCACCTC
CATTGGTACGTGTGCC
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