mRNA_H-fluviatilis_contig103649.730.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A6H5JUF8_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF8_9PHAE) HSP 1 Score: 138 bits (348), Expect = 1.860e-37 Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 1
Query: 31 GALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKIARSE 258
GALND FHIW +GPF TINGFRVGRL T +VDWQEVNAGVGQAA+VLVTVAMAMGVEF+KYLIAPCGSFTKIARSE
Sbjct: 243 GALNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFTKYLIAPCGSFTKIARSE 318
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A507F4Z8_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F4Z8_9FUNG) HSP 1 Score: 87.8 bits (216), Expect = 1.230e-18 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 19 LSSSGALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKIARSE 258
L + ND+F IW GPF TINGFR+GRLP VDW E+NA +GQA L+L T+A + F+ Y + P GSF++I ++E
Sbjct: 225 LKKTNVYNDTFRIWHDGPFGTINGFRMGRLPNQPVDWSEINAAMGQALLLLDTMASKLNFTFTGYRLVPMGSFSRIEKTE 304
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A485LFQ8_9STRA (Aste57867_20703 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFQ8_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.670e-18 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 37 LNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKIAR 252
LND+F+IW KGPF TI+GF +GRLP +DW E+NA G+ LV+V +A A+GV Y I P GSF+K+ R
Sbjct: 172 LNDAFYIWHKGPFGTISGFCLGRLPRHHIDWNEINAAWGEVGLVVVLLAEALGVHLKAYQIVPLGSFSKVIR 243
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A0L0HHY1_SPIPD (Uncharacterized protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HHY1_SPIPD) HSP 1 Score: 86.3 bits (212), Expect = 7.280e-18 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 19 LSSSGALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKIARSE 258
L + ND+F IW GPF TINGFR+GRLP VDW E+NA +GQA L+L T+A + F Y + P GSF++I +++
Sbjct: 291 LKKTNVYNDTFRIWHDGPFGTINGFRMGRLPNQPVDWSEINAAMGQALLLLDTMASKLNFTFKGYRLVPMGSFSRIEKTD 370
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A7S0DBW3_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DBW3_MICPS) HSP 1 Score: 85.9 bits (211), Expect = 1.030e-17 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 19 LSSSGALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKI 246
L + ND+FHIW GPF T+NGFR+GRLP V+W E+NA G A L+L T++ A GV F Y + P GSF+K+
Sbjct: 308 LRKTNVFNDAFHIWFDGPFGTVNGFRLGRLPNAPVEWDEINAAWGMACLLLSTMSHAAGVTFEHYTLKPLGSFSKV 383
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A4P9WRA3_9FUNG (Atg6/Beclin (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WRA3_9FUNG) HSP 1 Score: 84.3 bits (207), Expect = 1.140e-17 Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 19 LSSSGALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKIAR 252
L + ND+F IW GPF TINGFR+GRLP VDW E+NA +GQA L+L T+A + F Y + P GSF++I +
Sbjct: 162 LKKTNVYNDTFRIWHDGPFGTINGFRMGRLPNQPVDWSEINAAMGQALLLLDTLANKLNFMFKGYRLVPMGSFSRIEK 239
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A818VMA7_9BILA (Hypothetical protein n=3 Tax=Adineta steineri TaxID=433720 RepID=A0A818VMA7_9BILA) HSP 1 Score: 85.5 bits (210), Expect = 1.340e-17 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 19 LSSSGALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKI 246
LS + A N +FHIW + F TINGFR+GRLP+ V+W E+NAG+GQAAL+L ++A + ++F+KY I P GS++ I
Sbjct: 261 LSKTNAFNAAFHIWHQEHFGTINGFRLGRLPSIAVEWSEINAGLGQAALLLNSLAKRIDLQFTKYRIIPLGSYSYI 336
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: D2UY34_NAEGR (Autophagy protein 6 n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UY34_NAEGR) HSP 1 Score: 85.5 bits (210), Expect = 1.510e-17 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 19 LSSSGALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKI 246
L+S+ ND+FHIW +G F TIN FR+GRLPT V+W E+NA GQAAL+L +++ FSKY I P GSF++I
Sbjct: 474 LNSTNVFNDAFHIWYEGHFGTINNFRLGRLPTQNVEWNEINAAWGQAALLLFSLSKHKHFAFSKYKIIPMGSFSRI 549
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A3M6V8C9_9STRA (APG6 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8C9_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.750e-17 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 40 NDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKI 246
ND FHIW G F TING R+GRLP+ V+W E+NA +GQA L+L T+A G EFS+ + P GSF+++
Sbjct: 12 NDVFHIWHDGLFGTINGLRLGRLPSKPVEWVEINAAMGQAVLLLATIADRAGFEFSRNRLVPRGSFSRV 80
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Match: A0A814AX79_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814AX79_ADIRI) HSP 1 Score: 85.1 bits (209), Expect = 1.830e-17 Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 1
Query: 19 LSSSGALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVGQAALVLVTVAMAMGVEFSKYLIAPCGSFTKI 246
LS + A N +FHIW + F TINGFR+GRLP+ V+W E+NAG+GQAAL+L ++A + + F+KY I P GS++ I
Sbjct: 260 LSKTNAFNAAFHIWHQEHFGTINGFRLGRLPSITVEWSEINAGLGQAALLLNSLAKRIDLRFNKYRIVPLGSYSYI 335 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103649.730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig103649.730.1 >prot_H-fluviatilis_contig103649.730.1 ID=prot_H-fluviatilis_contig103649.730.1|Name=mRNA_H-fluviatilis_contig103649.730.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=86bp AALSTNLSSSGALNDSFHIWRKGPFATINGFRVGRLPTDLVDWQEVNAGVback to top mRNA from alignment at H-fluviatilis_contig103649:19..712- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig103649.730.1 ID=mRNA_H-fluviatilis_contig103649.730.1|Name=mRNA_H-fluviatilis_contig103649.730.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=694bp|location=Sequence derived from alignment at H-fluviatilis_contig103649:19..712- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig103649:19..712- >mRNA_H-fluviatilis_contig103649.730.1 ID=mRNA_H-fluviatilis_contig103649.730.1|Name=mRNA_H-fluviatilis_contig103649.730.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=516bp|location=Sequence derived from alignment at H-fluviatilis_contig103649:19..712- (Heribaudiella fluviatilis SAG_13_90)back to top |