mRNA_H-fluviatilis_contig103603.724.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A2E0QY89_9BACT (Mannonate dehydratase n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E0QY89_9BACT) HSP 1 Score: 134 bits (336), Expect = 4.710e-36 Identity = 60/112 (53.57%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 TPQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
TP +D+N +L AQ G +++V+ YPG +L L ++K+ S + L VIERY+P + +H T RD+QI+D +TLIRNMG+A V VLCY+WMP +DW RT LD KERGG+LVS
Sbjct: 8 TPFSDENLQLAAQIGVSEIVSIYPGLELENLQQIRKRVESFGMKLGVIERYVPTLEFIHATEKRDQQIEDFKTLIRNMGEAEVPVLCYSWMPNDDWQRTSLDAKERGGALVS 119
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A2N3HHQ7_9FLAO (Mannonate dehydratase n=1 Tax=Confluentibacter flavum TaxID=1909700 RepID=A0A2N3HHQ7_9FLAO) HSP 1 Score: 128 bits (321), Expect = 8.160e-34 Identity = 56/112 (50.00%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 1 TPQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
TP + N +L++Q GATD++ YPG +L++LL +KQ + +S IER +P VHN G D+QI+ +TL+RNMGKAGV+ LCY+WMP +DW RT L+V ERGG+L +
Sbjct: 8 TPMSHHNLKLVSQVGATDIIISYPGLNLNELLKRQKQVQKYGMTISCIERLIPTLKFVHNLEGADEQIEGFKTLLRNMGKAGVKTLCYSWMPDDDWQRTSLNVVERGGALTT 119
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A2D5Z039_9PLAN (Mannonate dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5Z039_9PLAN) HSP 1 Score: 127 bits (320), Expect = 1.560e-33 Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 1 TPQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
TP +D N +L Q G TD+V +PG L L++L+ + +L LSVIE Y+PH +VH GRD+QI+ TL+RNMG+AGV + CYN+MP +DWSRT +D ERGG+LV+
Sbjct: 8 TPPSDHNLQLARQIGVTDIVGRFPGLQLESLIALRDRIARFDLRLSVIEGYIPHEKIVHGLDGRDQQIEHFNTLLRNMGRAGVPICCYNFMPDDDWSRTGVDTLERGGALVT 119
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A2E7HNQ1_9BACT (Mannonate dehydratase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E7HNQ1_9BACT) HSP 1 Score: 125 bits (313), Expect = 1.230e-32 Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 4 PQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
P T++N +L AQ G +VV +PG D + L L ++ + + LSVIER LPH +VHN G+D QI+DI+TL+RNM + G++VLCYNWMP DW RT D+ ERGG+ V+
Sbjct: 9 PFTERNLQLAAQVGVEEVVVPFPGLDPNALPKLARRVEAFGMRLSVIERKLPHLKIVHNLEGQDAQIEDIKTLLRNMAEVGMKVLCYNWMPDEDWQRTSKDIPERGGAKVT 119
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A2D8VGB4_9BACT (Mannonate dehydratase n=3 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2D8VGB4_9BACT) HSP 1 Score: 120 bits (301), Expect = 7.370e-31 Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 4 PQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
P T++N +L AQ G VV YPG D L L K + + LSVI R LPH +VH GRD QI+D++TL+RNM + G+ VLCYNWMP DW RT D ERGG+ V+
Sbjct: 9 PFTERNLQLAAQVGVEQVVVPYPGLDPDALPDLVKMVEAFGMRLSVIXRKLPHLKIVHGLEGRDAQIEDVKTLLRNMAEVGMEVLCYNWMPDEDWQRTSKDAPERGGAKVT 119
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A382USG9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382USG9_9ZZZZ) HSP 1 Score: 119 bits (297), Expect = 7.740e-31 Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 4 PQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
P D+N +L AQ G +++V YPG DL LL K++ S + L+ IER +PH +VH PG ++Q+Q +TL+RNM +A +++LCYNWMP DW RT + +ERGG+LV+
Sbjct: 9 PFNDRNLQLAAQVGVSEMVIPYPGEDLKALLETKRRVESFGMRLTHIERKVPHLKLVHRLPGWEEQLQVFKTLLRNMAEAEMKILCYNWMPDEDWQRTSCETQERGGALVT 119
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A3L7NKC4_9BACT (Mannonate dehydratase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7NKC4_9BACT) HSP 1 Score: 117 bits (292), Expect = 1.410e-29 Identity = 55/111 (49.55%), Postives = 72/111 (64.86%), Query Frame = 1
Query: 4 PQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
P TD + + AQ G +D+V YPG D LL+ K++ S + L+ IER +PH VHN PGRD QI D ++L+ M AG+ VLCYNWMP DW RT V++RGGSLV+
Sbjct: 9 PPTDLHLQWAAQIGVSDIVIPYPGLDRVGLLATKRRVESFGMKLTHIERKVPHLQFVHNLPGRDAQIADFKSLLCIMADAGMEVLCYNWMPDEDWQRTSSHVRQRGGSLVT 119
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A520M7Z8_9BACT (Mannonate dehydratase n=2 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A520M7Z8_9BACT) HSP 1 Score: 116 bits (290), Expect = 2.780e-29 Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 1 TPQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
TP +++N +L AQ G ++V YPG + L+ K+ +S + L+ IER LPH +VHN GRD Q++ I++LIR MG+ G+ VLCYNWMP DW RT ERGGS +
Sbjct: 8 TPFSEENLQLAAQIGVEEIVLVYPGPEKDSLIKAKRMVDSFGMRLTHIERKLPHDQIVHNLSGRDGQVEKIKSLIREMGELGLEVLCYNWMPSEDWCRTTKLNPERGGSYTT 119
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A2D8Z3H4_9BACT (Mannonate dehydratase n=3 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2D8Z3H4_9BACT) HSP 1 Score: 116 bits (290), Expect = 3.470e-29 Identity = 53/112 (47.32%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 1 TPQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
TP D+N L AQ G ++V+ +PG + L SLK++ +S + L+ IER +PH +VH GRD QI LI+ MG G++VLCYNWMP DW RT D+ ERGGSL +
Sbjct: 19 TPICDKNLELAAQVGVEEIVSIFPGLEEGVLKSLKQKVDSFGMRLTHIERKIPHDQIVHGLSGRDDQINTFIELIKQMGGLGLKVLCYNWMPSEDWCRTSKDIPERGGSLCT 130
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Match: A0A2E9ERZ3_9BACT (Mannonate dehydratase (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E9ERZ3_9BACT) HSP 1 Score: 111 bits (278), Expect = 4.580e-29 Identity = 51/112 (45.54%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 1 TPQTDQNFRLMAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNTPGRDKQIQDIQTLIRNMGKAGVRVLCYNWMPVNDWSRTKLDVKERGGSLVS 336
TP D+N L AQ G ++V+ + G + L SL+++ +S + L+ IER +PH +VH GRD QI LI+ MG G++VLCYNWMP DW RT D+ ERGGSL +
Sbjct: 19 TPICDKNLELAAQVGVEEIVSIFRGLEEGVLKSLRQKVDSFGMRLTHIERKIPHDQIVHGLSGRDDQINTFIELIKQMGGLGLKVLCYNWMPSEDWCRTSKDIPERGGSLCT 130 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103603.724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig103603.724.1 >prot_H-fluviatilis_contig103603.724.1 ID=prot_H-fluviatilis_contig103603.724.1|Name=mRNA_H-fluviatilis_contig103603.724.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=102bp MAQAGATDVVAYYPGTDLSQLLSLKKQANSMNLNLSVIERYLPHSDVVHNback to top mRNA from alignment at H-fluviatilis_contig103603:261..750+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig103603.724.1 ID=mRNA_H-fluviatilis_contig103603.724.1|Name=mRNA_H-fluviatilis_contig103603.724.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=490bp|location=Sequence derived from alignment at H-fluviatilis_contig103603:261..750+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig103603:261..750+ >mRNA_H-fluviatilis_contig103603.724.1 ID=mRNA_H-fluviatilis_contig103603.724.1|Name=mRNA_H-fluviatilis_contig103603.724.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=612bp|location=Sequence derived from alignment at H-fluviatilis_contig103603:261..750+ (Heribaudiella fluviatilis SAG_13_90)back to top |