mRNA_H-fluviatilis_contig103506.708.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: A0A7N9AP25_9TELE (Plac8 onzin related protein 1 n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N9AP25_9TELE) HSP 1 Score: 70.1 bits (170), Expect = 2.880e-12 Identity = 36/92 (39.13%), Postives = 50/92 (54.35%), Query Frame = 3
Query: 3 TW--GLYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCVLMCCMLPCN-RSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTR 269
TW GL +CC++ CAL+C PC G CCL + +CC++ C+ RS++RERY IPG C DC C C+ Q+ E+ R
Sbjct: 21 TWSTGLCDCCSDMGTCCCALWCFPCMQCQAANYHGWCCCLPMLDVCCVVSCSLRSSIRERYGIPGSLCDDCCKLLWCYPCTWCQMHREVKIR 112
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: UPI001BE553B6 (plac8 onzin related protein 1 n=1 Tax=Chelmon rostratus TaxID=109905 RepID=UPI001BE553B6) HSP 1 Score: 68.9 bits (167), Expect = 7.800e-12 Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 3
Query: 3 TW--GLYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCVLMCCMLPCN-RSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTR 269
TW GL +CC + C LFC PC G CC+ + +CC++ C RS++RERY+IPG C DC C C Q++ E+ R
Sbjct: 20 TWSSGLCDCCNDMSTCCCGLFCFPCMQCQTAADYGWCCCMPLLDVCCVVSCVLRSSIRERYNIPGSFCDDCCKLLWCYQCVWCQMNRELKIR 111
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: UPI001CF69C50 (plac8 onzin related protein 1 isoform X1 n=4 Tax=Thunnus TaxID=8234 RepID=UPI001CF69C50) HSP 1 Score: 69.3 bits (168), Expect = 1.160e-11 Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 3
Query: 3 TWGLYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCVLMCCMLPCN-RSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTR 269
T GL +CC + C L+C PC K G CCL + +CC++ C RS++R++Y IPG CC DC C C Q++ E+ R
Sbjct: 57 TSGLCDCCNDMGTCCCGLWCFPCMQCQTASKHGWCCCLPLLDVCCVVSCLLRSSIRDKYGIPGSCCEDCCQLTWCYPCVWCQMNRELKVR 146
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: UPI001C044C97 (placenta-specific gene 8 protein-like n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C044C97) HSP 1 Score: 66.2 bits (160), Expect = 8.540e-11 Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 3
Query: 9 GLYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCVLMCC-MLPCN-RSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTRTIYAP 284
GL +CC++ C +C PC K G CC +L CC ++ C RS++RERY IPG CC DC C C+ Q++ E+ RT Y P
Sbjct: 24 GLCDCCSDMGTCCCGYWCFPCMQCETASKHGW-CCGMPLLDCCGVVSCLLRSSIRERYGIPGSCCDDCCTLCWCYVCAWCQMNREVKIRTRYQP 116
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: A0A672I5U9_SALFA (Uncharacterized protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672I5U9_SALFA) HSP 1 Score: 65.5 bits (158), Expect = 1.180e-10 Identity = 33/89 (37.08%), Postives = 47/89 (52.81%), Query Frame = 3
Query: 9 GLYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCV-LMCCMLPCN-RSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTR 269
GL++CC++ E C L C PC G + C+ CC++ C RS++RERY IPG C DC + C C Q++ E+ TR
Sbjct: 24 GLFDCCSDVETCCCGLLCFPCMQCQTASSHGWCSLMPCLDAFCCVVSCMLRSSIRERYAIPGSFCDDCCNIFWCYPCVWCQMNRELKTR 112
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: UPI001A99CB7E (plac8 onzin related protein 1 n=1 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A99CB7E) HSP 1 Score: 65.5 bits (158), Expect = 1.680e-10 Identity = 36/96 (37.50%), Postives = 49/96 (51.04%), Query Frame = 3
Query: 3 TW--GLYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCVLMC-----CMLPCNRSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTR 269
TW GL +CC++ C L+C PC G CC+ + C C+L RS+VRERY IPG CC DC + C C+ Q++ E+ R
Sbjct: 20 TWSTGLCDCCSDMGTCCCGLWCFPCMQCQTANIHGWCCCIPILDACXXVVSCLL---RSSVRERYGIPGSCCDDCCKFFWCYMCAWCQMNRELKIR 112
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: A0A7N6B3Y2_ANATE (Cornifelin-like n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6B3Y2_ANATE) HSP 1 Score: 65.1 bits (157), Expect = 2.250e-10 Identity = 31/89 (34.83%), Postives = 46/89 (51.69%), Query Frame = 3
Query: 9 GLYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCVLMCCMLP-CNRSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTRT 272
GL++CC++ E C +C PC G CC+ CC++ R+++RERY+IPG CC D C C+ Q+ E+ RT
Sbjct: 23 GLFDCCSDMETFCCGFWCFPCMQCETAHTFGWCCCVPMADECCVVSYLLRTSIRERYNIPGSCCGDYCTVIWCYQCAWCQMHREVKIRT 111
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: A0A667ZUR2_9TELE (Placenta-specific gene 8 protein-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667ZUR2_9TELE) HSP 1 Score: 65.1 bits (157), Expect = 2.580e-10 Identity = 35/91 (38.46%), Postives = 47/91 (51.65%), Query Frame = 3
Query: 12 LYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCVLM----CCMLPCN-RSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTR 269
+ +CCA+ CAL C PC + G CC L+ C + C+ RS++R+RY IPGGCC DC CC C Q+S E+ R
Sbjct: 27 MCDCCADMGTCCCALLCFPCLQCKTAKDFGW-CCWCMPLLDSCFCFAVSCHLRSSIRQRYGIPGGCCDDCCKVMCCYPCVWCQMSREVNVR 116
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: A0A3Q1GY46_ANATE (Cornifelin-like n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1GY46_ANATE) HSP 1 Score: 63.5 bits (153), Expect = 8.670e-10 Identity = 30/88 (34.09%), Postives = 45/88 (51.14%), Query Frame = 3
Query: 9 GLYECCANPEKAACALFCGPCTHGMDMQKLGKNCCLSCVLMCCMLP-CNRSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTR 269
GL++CC++ E C +C PC G CC+ CC++ R+++RERY+IPG CC D C C+ Q+ E+ R
Sbjct: 23 GLFDCCSDMETFCCGFWCFPCMQCETAHTFGWCCCVPMADECCVVSYLLRTSIRERYNIPGSCCGDYCTVIWCNECAWCQMRRELRIR 110
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Match: UPI001176766C (cornifelin homolog B-like n=1 Tax=Salarias fasciatus TaxID=181472 RepID=UPI001176766C) HSP 1 Score: 61.6 bits (148), Expect = 2.320e-9 Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 3
Query: 36 EKAACALFCGPCTHGMDMQKLGKNCCLSCVLMCCMLPCN-RSTVRERYHIPGGCCSDCVAAYCCGCCSIVQISHEITTR 269
+ C +C PC K G C + C+ CC++ C RS++RERY IPG CC+DC + C C Q++ E+ +R
Sbjct: 2 KTCCCGFWCFPCMQCQTASKHGWCCLMPCLDFCCVVSCVLRSSIRERYAIPGSCCNDCCNIFWCYPCVWCQMNRELKSR 80 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103506.708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig103506.708.1 >prot_H-fluviatilis_contig103506.708.1 ID=prot_H-fluviatilis_contig103506.708.1|Name=mRNA_H-fluviatilis_contig103506.708.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=122bp MDMQKLGKNCCLSCVLMCCMLPCNRSTVRERYHIPGGCCSDCVAAYCCGCback to top mRNA from alignment at H-fluviatilis_contig103506:2..690+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig103506.708.1 ID=mRNA_H-fluviatilis_contig103506.708.1|Name=mRNA_H-fluviatilis_contig103506.708.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=689bp|location=Sequence derived from alignment at H-fluviatilis_contig103506:2..690+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig103506:2..690+ >mRNA_H-fluviatilis_contig103506.708.1 ID=mRNA_H-fluviatilis_contig103506.708.1|Name=mRNA_H-fluviatilis_contig103506.708.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=732bp|location=Sequence derived from alignment at H-fluviatilis_contig103506:2..690+ (Heribaudiella fluviatilis SAG_13_90)back to top |