mRNA_H-fluviatilis_contig103367.690.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A085NCX9_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085NCX9_9BILA) HSP 1 Score: 59.3 bits (142), Expect = 2.050e-10 Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 KKQKVMRRPGLEPGSSAWQAPILPLNHRRGCCSKILFDYRHRDYRTS 141
K+ +RRPG+EPGS AWQA ILPLNH+R ++F +RHR Y TS
Sbjct: 4 KRDDFLRRPGIEPGSPAWQASILPLNHQRA----VVFSWRHRMYFTS 46
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A0V1A5K6_9BILA (Uncharacterized protein n=1 Tax=Trichinella patagoniensis TaxID=990121 RepID=A0A0V1A5K6_9BILA) HSP 1 Score: 53.5 bits (127), Expect = 1.280e-7 Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 1
Query: 10 KVMRRPGLEPGSSAWQAPILPLNHRRGCCSKILFDY 117
K +RRPG+EPGS AWQA ILPLNHRR CC K Y
Sbjct: 76 KDLRRPGIEPGSPAWQASILPLNHRR-CCDKDKAPY 110
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A5K3G8C2_MESCO (Uncharacterized protein n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3G8C2_MESCO) HSP 1 Score: 50.8 bits (120), Expect = 4.770e-7 Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 16 MRRPGLEPGSSAWQAPILPLNHRRGCCSKILFDYRHRDYRTSF 144
MRRPG+EPG AWQA ILPLNHRR C H ++T+F
Sbjct: 1 MRRPGIEPGPPAWQASILPLNHRRVPCRT------HSTHKTAF 37
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A0V1BSR8_TRISP (Uncharacterized protein n=1 Tax=Trichinella spiralis TaxID=6334 RepID=A0A0V1BSR8_TRISP) HSP 1 Score: 51.6 bits (122), Expect = 9.680e-7 Identity = 27/47 (57.45%), Postives = 30/47 (63.83%), Query Frame = 1
Query: 10 KVMRRPGLEPGSSAWQAPILPLNHRRGCCSKILFDYRHRDYRTSFLP 150
K +RRPG+EPGS AWQA ILPLNHRR CC D R+S P
Sbjct: 97 KGLRRPGIEPGSPAWQASILPLNHRR-CC----------DIRSSKKP 132
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A811URD2_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811URD2_CERCA) HSP 1 Score: 48.9 bits (115), Expect = 4.690e-6 Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 1 KKQKVMRRPGLEPGSSAWQAPILPLNHRRGCCSKIL 108
KK++++ RPG+EPG AWQA ILPLNHR C ++L
Sbjct: 64 KKKRILHRPGIEPGPPAWQASILPLNHR--CLLRVL 97
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A0M3I1F6_ASCLU (Uncharacterized protein n=1 Tax=Ascaris lumbricoides TaxID=6252 RepID=A0A0M3I1F6_ASCLU) HSP 1 Score: 48.1 bits (113), Expect = 6.570e-6 Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 1
Query: 13 VMRRPGLEPGSSAWQAPILPLNHRRGCCSKILFDYRHRDYRTSFL 147
++RRPG+ PG AWQA ILPLNHRR S+++F + S +
Sbjct: 1 MLRRPGIGPGPPAWQASILPLNHRRWFRSEVVFPNGCEALKASVI 45
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A183T2K8_SCHSO (LIM zinc-binding domain-containing protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183T2K8_SCHSO) HSP 1 Score: 49.7 bits (117), Expect = 9.100e-6 Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 1
Query: 16 MRRPGLEPGSSAWQAPILPLNHRRGCCSKILFDY 117
MRRPG+EPG AWQA ILPLNHRR + +L +
Sbjct: 152 MRRPGIEPGPPAWQASILPLNHRRTSSTALLLHF 185
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A1R0H3F5_9FUNG (Uncharacterized protein n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0H3F5_9FUNG) HSP 1 Score: 47.0 bits (110), Expect = 1.260e-5 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 1
Query: 13 VMRRPGLEPGSSAWQAPILPLNHRR 87
MRRPG+EPGS+AWQA I+PLNH R
Sbjct: 29 TMRRPGIEPGSAAWQAAIIPLNHLR 53
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A183V9D0_TOXCA (Uncharacterized protein n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183V9D0_TOXCA) HSP 1 Score: 47.4 bits (111), Expect = 1.770e-5 Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 1
Query: 10 KVMRRPGLEPGSSAWQAPILPLNHRR 87
K +RRPG+EPG AWQA ILPLNHRR
Sbjct: 75 KQLRRPGIEPGPPAWQASILPLNHRR 100
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Match: A0A0M3J6C2_ANISI (Uncharacterized protein n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3J6C2_ANISI) HSP 1 Score: 47.8 bits (112), Expect = 4.040e-5 Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 1
Query: 16 MRRPGLEPGSSAWQAPILPLNHRR 87
MRRPG+EPGS AW+A ILPLNHRR
Sbjct: 1 MRRPGIEPGSLAWEASILPLNHRR 24 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103367.690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig103367.690.1 >prot_H-fluviatilis_contig103367.690.1 ID=prot_H-fluviatilis_contig103367.690.1|Name=mRNA_H-fluviatilis_contig103367.690.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=46bp MRRPGLEPGSSAWQAPILPLNHRRGCCSKILFDYRHRDYRTSFLP*back to top mRNA from alignment at H-fluviatilis_contig103367:448..600+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig103367.690.1 ID=mRNA_H-fluviatilis_contig103367.690.1|Name=mRNA_H-fluviatilis_contig103367.690.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=153bp|location=Sequence derived from alignment at H-fluviatilis_contig103367:448..600+ (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig103367:448..600+ >mRNA_H-fluviatilis_contig103367.690.1 ID=mRNA_H-fluviatilis_contig103367.690.1|Name=mRNA_H-fluviatilis_contig103367.690.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=276bp|location=Sequence derived from alignment at H-fluviatilis_contig103367:448..600+ (Heribaudiella fluviatilis SAG_13_90)back to top |