mRNA_H-fluviatilis_contig1033.670.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig1033.670.1
Unique NamemRNA_H-fluviatilis_contig1033.670.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: D8LM21_ECTSI (Stn1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM21_ECTSI)

HSP 1 Score: 466 bits (1198), Expect = 1.480e-159
Identity = 236/388 (60.82%), Postives = 283/388 (72.94%), Query Frame = 2 
Query:  212 TVGLRVHEWGLNPLFWSYVKLFARDVHALGTLSGIDNSHVLHG-KAAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPFRRDEYVDDELILSSSQSRPSRCECGADYADAMGYCRCVAAPLACDPSFEFRDALLSHLSAKEESLP-LGKHLRFQFARDVRDNPSLKDSAVRIVLADRSTPVGPEVRESAAGGGSISDGRDGTREARRAISETVLNAKVMELLRAVMFSLQRDGAVHFSDKAEDVYVLLSRGKVLQPHVQAVCRERGLNLNQDNEIIRALQSTALFHHVSGARIRACIRHMKASSEPKEE 1369
            T GLRVHEWGLNPLFWSYVKL  RDVH LGTL GID+SHVLHG KA HRVEVSG+VVH+KPG TK  GSYVKY+LDDGTGLL CTQYER   +G  H+GH +RHELGE L+VQG+LKRYRGAREV + S +KPTDPN+E L  L+C+EL KTVY+PPF+RD+Y+D+EL+  SSQ+RP++C CGA YA+A+GYCRCVAAPLA DP+FEFRDALL+ L+AKEESL    +HLRFQFARD                           R + AG  + +  R             +  AK +ELLRAVM SL RDGA+HF D+A DVYVL+SRG+VL+P V+  CR R L L+Q+NEIIRALQ +AL HHV GARIRAC+  MK +    ++
Sbjct:   40 TPGLRVHEWGLNPLFWSYVKLLIRDVHGLGTLGGIDDSHVLHGNKAIHRVEVSGVVVHVKPGATKASGSYVKYILDDGTGLLPCTQYERHAGTGATHRGHSERHELGELLVVQGKLKRYRGAREVAITSASKPTDPNQEALHWLRCVELGKTVYRPPFQRDDYIDEELVAGSSQARPTQCGCGAAYAEAVGYCRCVAAPLALDPTFEFRDALLARLAAKEESLAGPDEHLRFQFARD---------------------------RPAEAGAAAAAAPRG-----------VMQQAKALELLRAVMSSLHRDGALHFLDRARDVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGSALLHHVPGARIRACVYRMKKAGRSAQQ 389
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: A0A2B4SF39_STYPI (CST complex subunit STN1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SF39_STYPI)

HSP 1 Score: 95.5 bits (236), Expect = 4.440e-18
Identity = 58/156 (37.18%), Postives = 86/156 (55.13%), Query Frame = 2 
Query:  221 LRVHEWGLNPLFWSYVKLFARDVHALGTLSGIDNSHVLHGK-AAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKR-HELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPF 682
            L V  WGLNPLFW+++K+F  +V +L   S     +         RVEV+G +V I   +  T      Y +DDG+G + C ++     S DL  G G+  ++LG+ + VQG++  +R  R++ V  I   TDPN EVL  L+ + L+ TVYK PF
Sbjct:   12 LPVRFWGLNPLFWTHIKMFVTEVQSLKDNSDYKGVYWYSNNFPVVRVEVTGYIVSIDVREKLT-----TYGVDDGSGTISCCKWH----SLDLKAGRGQESYDLGQLVTVQGKISVFREQRQLTVDLIYPETDPNAEVLFWLEAVNLSNTVYKEPF 158
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: A0A6S7J3X3_PARCT (CST complex subunit STN1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J3X3_PARCT)

HSP 1 Score: 88.6 bits (218), Expect = 1.170e-15
Identity = 52/165 (31.52%), Postives = 84/165 (50.91%), Query Frame = 2 
Query:  221 LRVHEWGLNPLFWSYVKLFARDVHALGTLSGIDNSHVLHGKAAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPFRRDEYVDDELI 715
            L V  WGL+PL+W++VKLF RDV  L   SG    + +      +V V G +V +   +  T      Y +DDGTG L C  +   N++ DL +        G+ + V G++  +R  R++  +S    TDPN EV   L+ ++L + +Y+ PF   E  + + +
Sbjct:    5 LPVKSWGLDPLYWTHVKLFVRDVLQLKNYSGFKGVYAISNHPIAQVLVVGYIVKVDKREKLT-----TYGVDDGTGCLSCCMWH--NQNNDLVEA-----TFGDLVTVMGKISVFREERQITASSFYIETDPNVEVFHWLEVMKL-REIYEKPFEVSENPETKTV 156
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: UPI001F0352F5 (CST complex subunit STN1-like isoform X1 n=3 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0352F5)

HSP 1 Score: 83.6 bits (205), Expect = 1.270e-14
Identity = 47/150 (31.33%), Postives = 78/150 (52.00%), Query Frame = 2 
Query:  236 WGLNPLFWSYVKLFARDVHALGTLSGIDNSHVLHGKAAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPFR 685
            WG +PL+WS+VKLF RDV  L    G D+ + +      +V + G VV +   +       + + +DDGTGL+ C  +   N   D+   +     LG+ + V G++  Y  AR+++++S    TD N EVL  L  + + + +Y  PF+
Sbjct:   10 WGSDPLYWSHVKLFVRDVLCLREYPGFDSVYAISNHPVVQVLIVGYVVKVHKKE-----KLITFEVDDGTGLISCCYWY--NEHVDMVDAN-----LGDLVTVMGKISNYHNARQIIISSFYIETDHNVEVLHWLDVMNI-REIYLKPFQ 146
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: UPI001068F5E4 (CST complex subunit STN1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068F5E4)

HSP 1 Score: 84.7 bits (208), Expect = 2.410e-14
Identity = 51/155 (32.90%), Postives = 78/155 (50.32%), Query Frame = 2 
Query:  221 LRVHEWGLNPLFWSYVKLFARDVHALGTLSGIDNSHVLHGKAAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPFR 685
            L V  WGL+PL+W++VKLFARDV  L    G    + +         V G +V +   +  T      Y +DDGTG L C  +          Q +G   + G+ + V GR+  +R  R++ ++ +   TD N EVL  L+ ++L K VY+ PF+
Sbjct:    5 LPVKFWGLDPLYWTHVKLFARDVLKLKEYPGFTGVYAISNHPIVHALVVGYIVKVDKREKLT-----NYGVDDGTGFLPCCMWH--------DQSNGIEADFGDLVTVMGRISTFREERQITLSKLNIETDSNVEVLHWLEVMKL-KEVYQKPFK 145
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: A0A0H5R9L4_9EUKA (OB domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R9L4_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 2.760e-14
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 2 
Query:  236 WGLNPLFWSYVKLFARDVHALGTLSGIDN-SHVLHGKAAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPFRRDEYVDDELILSSS 727
            WGL  L+WSY++LF  D+  LG        S+ L+    HRV + G+VV ++   T      V  ++DDGTG++  T++  D  S           ELG+ + + G+L  +R  R+V + S +   DPN E+L   Q I+L   +Y+ P    + +  +L +S+S
Sbjct:   26 WGLESLYWSYIRLFIGDISRLGEFPAHPGQSYALYRHPIHRVCILGVVVDLRLHATN-----VNVMVDDGTGIILATRWFNDRPSSTEL-------ELGKLVQIYGKLSTFREERQVQILSWSVVVDPNVELLHCAQVIDLHDNLYRLPDDVADKLAHDLQVSAS 178
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: A0A1X2ITM2_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2ITM2_9FUNG)

HSP 1 Score: 83.6 bits (205), Expect = 5.650e-14
Identity = 61/230 (26.52%), Postives = 105/230 (45.65%), Query Frame = 2 
Query:  236 WGLNPLFWSYVKLFARDVHALGTLSGIDNSHVLHGKAAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPFRRDEYVDDELILSSSQSRPSRCECGADYADAMGYCRCVAAPLACDPSFEFRDALLSHLSAKEESLPLGKHLRFQFARDVRD 925
            WGL+PLFW+ VKLF +D+  L  +    +            ++ G++V ++  QT    S + Y +DDG+G+L C +++ + +  ++         +G+ + + GR+  Y G R+V +  +A  TDPN E+L  L+ + L +  Y  PFR         I    +      E G D    +         L+ D    F ++LLS+L  K  +  +   +  Q   DV D
Sbjct:    6 WGLDPLFWTNVKLFIKDILNLTEVPDYKDIFTFFDHHIRYTQLCGVIVAVE--QTS---SMMIYTVDDGSGVLPCVRWKDNIKKREMVN-------MGDCVRITGRIATYNGTRQVKIFDLAVLTDPNWELLFNLEIMALRRDHYSKPFRVPT-----RITQHEEELKRELEMGKDTLPMV---------LSEDVKQNFENSLLSYLETKFGTTTIFTLVDLQSDPDVHD 209
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: L8GR52_ACACA (OBfold nucleic acid binding domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GR52_ACACA)

HSP 1 Score: 79.7 bits (195), Expect = 1.370e-13
Identity = 50/153 (32.68%), Postives = 72/153 (47.06%), Query Frame = 2 
Query:  227 VHEWGLNPLFWSYVKLFARDVHALGTLSGIDNSHV--LHGKAAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPP 679
            V  WGL+PLFW++VKLF  D      LS  D +    L+G    RV V GI+V   P        ++   +DDGTG +QC  Y      G +     +   +G    +QG+L  +R  R + +  I    DPN E    L  + L +T+Y+ P
Sbjct:   47 VEHWGLDPLFWTHVKLFIGDALTNLPLSEPDATEPFNLNGHPVTRVAVMGIIVEALPRPR-----HLALSVDDGTGRIQCAYYANSVDEGGVPYSDLQ---VGCLASIQGKLHHFRQQRSIAIYRIGIEEDPNAETQHMLDVVRLGETIYQRP 191
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: A0A7S3QJF5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJF5_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.110e-9
Identity = 102/412 (24.76%), Postives = 160/412 (38.83%), Query Frame = 2 
Query:  242 LNPLFWSYVKLFARDVHALGTLSGID----NSHVLHGKAAH-----------RVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQG----HGKRHELGEFLIVQGRLK-------------------RYRGAREVVVASIAKPTDPNEEVLRRLQCI----------------ELAK----------------TVYKPPFRRDEYVDDELILSSSQSRPSR---------------CECGADYADAMGYCRCVAAPLACDPSFEFRDALLSHLSAKEESLPLGKHLRFQFARDVRDNPSLKDSAV----RIVLADRSTPVGPEVRESAAGGGSISDGRDGTREARRAISETVLNAKVMELLRAVMFSLQRDGAVHFSDKAEDVYVLLSRGKVLQP 1210
            L+  +  Y  LF   VH+L  L+G+D     S V   K              + EV+GI+ +    Q K+ G+Y + ++DDG+GLL C  +E D    +L +G      +R ++G F+ ++G ++                    Y   REV + S+    D N E +  L CI                EL K                T++  P    + +     LS     P R               C C   Y +++ YC C+A+    DP   FRD LL  L   E S      L F     +R+    + + +    RI   D       E+ ++ A G  +S   D T   RR  ++T  +             L++DG +  +D+ EDVY+LLS+ +VL P
Sbjct:   24 LSRAYHEYNPLFIETVHSLILLNGMDCIIGKSGVCEDKQTSEGLTTYVLPVSKCEVAGIIQYY---QEKSNGTY-QLVVDDGSGLLDCFGWE-DPVISELFEGAKYFDDRRFKVGCFIRIRGEIRVQALKDKKSVQIDEGIICEGYTAIREVRIHSMEILHDFNAEAVHWLGCIQFRRRIGMKVSVEKGKELTKEEYGEILRVPILNGLETLHNLPQETRKRMISSSDLSLHNDSPIRHDNENRCFIKYFGRYCTCNISYKESLLYCHCLASREQLDPELSFRDTLLKRLLDLEMSNHTDSSLNF-----IREKCGGQKNCLLFRFRIAFQD-------EILKAVAKG-VVSKTCDPTINLRRLYTKTFRH-------------LRKDGILFLADEHEDVYMLLSKERVLVP 404
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BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Match: A0A163IYN6_ABSGL (OB domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163IYN6_ABSGL)

HSP 1 Score: 68.9 bits (167), Expect = 4.060e-9
Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = 2 
Query:  239 GLNPLFWSYVKLFARDVHALGTLSGIDNSHVLHGKAAHRVEVSGIVVHIKPGQTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIVQGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPF 682
            GL+PL W+ VKLF +DV  L  L G  + +         VE+ GIVV ++   T        Y +DDGTG L C  ++    + +          LG  + + G +  ++  R+V V  +   +DPN E+L  LQ + L +  Y  PF
Sbjct:    7 GLDPLMWTNVKLFIKDVLDLVPLPGYTDIYCFEDHNIRNVELCGIVVAVEQNLTMMI-----YTVDDGTGTLTCIWWKDTIDTEETIS-------LGSCVRILGLVCTFKDERKVKVFDLDVISDPNWELLHTLQVLALRRDHYNKPF 142
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig1033.670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LM21_ECTSI1.480e-15960.82Stn1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A2B4SF39_STYPI4.440e-1837.18CST complex subunit STN1 n=2 Tax=Stylophora pistil... [more]
A0A6S7J3X3_PARCT1.170e-1531.52CST complex subunit STN1 n=1 Tax=Paramuricea clava... [more]
UPI001F0352F51.270e-1431.33CST complex subunit STN1-like isoform X1 n=3 Tax=X... [more]
UPI001068F5E42.410e-1432.90CST complex subunit STN1-like n=1 Tax=Dendronephth... [more]
A0A0H5R9L4_9EUKA2.760e-1431.52OB domain-containing protein (Fragment) n=1 Tax=Sp... [more]
A0A1X2ITM2_9FUNG5.650e-1426.52Uncharacterized protein n=1 Tax=Absidia repens Tax... [more]
L8GR52_ACACA1.370e-1332.68OBfold nucleic acid binding domain containing prot... [more]
A0A7S3QJF5_9STRA2.110e-924.76Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A163IYN6_ABSGL4.060e-931.08OB domain-containing protein n=1 Tax=Absidia glauc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig1033contigH-fluviatilis_contig1033:14269..20093 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.5
Seed ortholog evalue1.4e-128
Seed eggNOG ortholog2880.D8LM21
EggNOG OGs2E4ZN@1,2SBUB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1375
Cds size1281
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929078.3958855-CDS-H-fluviatilis_contig1033:14268..145851622929078.3958855-CDS-H-fluviatilis_contig1033:14268..14585Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 14269..14585 -
1691135174.2798321-CDS-H-fluviatilis_contig1033:14268..145851691135174.2798321-CDS-H-fluviatilis_contig1033:14268..14585Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 14269..14585 -
1622929078.4132328-CDS-H-fluviatilis_contig1033:14666..150391622929078.4132328-CDS-H-fluviatilis_contig1033:14666..15039Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 14667..15039 -
1691135174.288773-CDS-H-fluviatilis_contig1033:14666..150391691135174.288773-CDS-H-fluviatilis_contig1033:14666..15039Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 14667..15039 -
1622929078.4289775-CDS-H-fluviatilis_contig1033:15337..154521622929078.4289775-CDS-H-fluviatilis_contig1033:15337..15452Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 15338..15452 -
1691135174.29856-CDS-H-fluviatilis_contig1033:15337..154521691135174.29856-CDS-H-fluviatilis_contig1033:15337..15452Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 15338..15452 -
1622929078.4466565-CDS-H-fluviatilis_contig1033:16025..161761622929078.4466565-CDS-H-fluviatilis_contig1033:16025..16176Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 16026..16176 -
1691135174.3090656-CDS-H-fluviatilis_contig1033:16025..161761691135174.3090656-CDS-H-fluviatilis_contig1033:16025..16176Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 16026..16176 -
1622929078.4652576-CDS-H-fluviatilis_contig1033:19050..192101622929078.4652576-CDS-H-fluviatilis_contig1033:19050..19210Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 19051..19210 -
1691135174.3210988-CDS-H-fluviatilis_contig1033:19050..192101691135174.3210988-CDS-H-fluviatilis_contig1033:19050..19210Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 19051..19210 -
1622929078.4773629-CDS-H-fluviatilis_contig1033:19834..199991622929078.4773629-CDS-H-fluviatilis_contig1033:19834..19999Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 19835..19999 -
1691135174.3321238-CDS-H-fluviatilis_contig1033:19834..199991691135174.3321238-CDS-H-fluviatilis_contig1033:19834..19999Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig1033 19835..19999 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929078.489207-UTR-H-fluviatilis_contig1033:19999..200931622929078.489207-UTR-H-fluviatilis_contig1033:19999..20093Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig1033 20000..20093 -
1691135174.3473935-UTR-H-fluviatilis_contig1033:19999..200931691135174.3473935-UTR-H-fluviatilis_contig1033:19999..20093Heribaudiella fluviatilis SAG_13_90UTRH-fluviatilis_contig1033 20000..20093 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig1033.670.1prot_H-fluviatilis_contig1033.670.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig1033 14269..19999 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig1033.670.1

>prot_H-fluviatilis_contig1033.670.1 ID=prot_H-fluviatilis_contig1033.670.1|Name=mRNA_H-fluviatilis_contig1033.670.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=427bp
MQRLGVPDQGWENDSESTEATTRDTSARSSYTQKYSHGPTVGLRVHEWGL
NPLFWSYVKLFARDVHALGTLSGIDNSHVLHGKAAHRVEVSGIVVHIKPG
QTKTFGSYVKYLLDDGTGLLQCTQYERDNRSGDLHQGHGKRHELGEFLIV
QGRLKRYRGAREVVVASIAKPTDPNEEVLRRLQCIELAKTVYKPPFRRDE
YVDDELILSSSQSRPSRCECGADYADAMGYCRCVAAPLACDPSFEFRDAL
LSHLSAKEESLPLGKHLRFQFARDVRDNPSLKDSAVRIVLADRSTPVGPE
VRESAAGGGSISDGRDGTREARRAISETVLNAKVMELLRAVMFSLQRDGA
VHFSDKAEDVYVLLSRGKVLQPHVQAVCRERGLNLNQDNEIIRALQSTAL
FHHVSGARIRACIRHMKASSEPKEET*
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mRNA from alignment at H-fluviatilis_contig1033:14269..20093-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig1033.670.1 ID=mRNA_H-fluviatilis_contig1033.670.1|Name=mRNA_H-fluviatilis_contig1033.670.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=5825bp|location=Sequence derived from alignment at H-fluviatilis_contig1033:14269..20093- (Heribaudiella fluviatilis SAG_13_90)
CCTTGACCACCCCTATGTCCCCCGCATACCGTAGCAGCCACGCCACGCTC
AACCGCAGACTTCGGCCATCTGGTCTCTCACATTTTTTGACAAAATGCAA
AGGCTAGGAGTTCCCGACCAAGGATGGGAAAATGATTCAGAATCGACTGA
GGCGACGACACGAGACACGAGTGCACGCTCCTCGTACACGCAAAAGTATT
CCCACGGGCCAACTGTGGGACTTCGGGTGCATGAGTGGGGGCTCAACCCG
CTGTTTTGGGTAAGCCGCACGCATACGGAGGGTCACAACTACATCAGGAT
GTTGTACGATGCGACGCGTGATGCCTGGCGTTTGGAATGATCGCGAAGTC
TCAAGCACCCACCAAGCTTGTACTTGTTGGTACTTCTGTCAGGGATTGGT
AGGCGGCGTCCTTGAAAAAGATGCGACGACACGACCTCACGTTTGAATTG
GCATCTGTCAAATCTGGTGTTCAAATTCGTGATGCTCAATTTTCTTCTCT
CTCCACATTCCAGTCCTTCGCTCGGCATGCCGTGGTGCGCCGCAGCCTAT
CAGCTGTTGAATTTCAATGTCGGCTCGCGCAGTGCATGCATAAATGACTT
ATACTTTCCCTGTATTGTAAGCCTTGCCGCTGCTCTGACTCAAGAATTTA
CTCTGTCAGCAGTGCTAATTGACGAGCGCGGCCCTGTAACGAGACCCCCA
ACAATTTGCAGTGCTACCGTCGGATGGGGTCTATTTCTTCGGAAAACCAC
ACACCACACTTGGCTTGTGGTCCACCTCGTGTGTGCGGCCTTCGTGCCAC
CAACGACGACGACTCTTACGCCCCGCAGTCATCCGATGCAACTGTCTTTT
AATTTAAATACTTCACACGCTGCTGCCAATCAGAGCTACGTGAAGCTGTT
TGCGCGAGACGTTCACGCTCTGGGTACACTATCAGGTATCGACAACTCGC
ATGTCTTGCACGGAAAGGCTGCGCACCGAGTGGAGGTGTCGGGAATAGTA
GTGCACATCAAGCCTGGCCAGACGAAGACCTTCGGGAGCTACGGTGAGCT
TAAGTGGTGAGGTGTTGAATGTCTCGTAGAGCCTGCACGCTTCCAAACAA
TTCGCGGGATTCACACGAATCAGAACAGAGTGTGGCCGCTGTCGGACGCG
TGTGCGGCCTCCAGGTGGGTGTGTGTTACCTTATTGCACCTTGCCGGCTC
GGCCACTACAGTGATATACATTGATGCATCTGTGATATATATATATACAT
GGGAAGTAGGGAGTAGATAGCTGTCCGTTACGGTGCGCTTGGCCAAACGA
CATCGAAACGCACCGTGCCGCCAGCCGGGTCAGTCAGTTGGTTCCTATCG
CCCACTTTCGTAATTCGAATCTATGCGCACATGGCTATCCATATTGAAAC
GAAACGCATACGCGTAGCTCTGTAGCAGAGGAGGGCCTTGAATGTGCCCC
AACACTAAAATCCTCACAAGTGCCCTGAGAGTTCATCCAATATCCCCCGG
CATCGGAACATAGTAGGAATTAGTGTATCTGACAACAAAAAGCCGAGTAT
CGAGATCTAGAGATACATACGTATACCACGTGGAGGCGACCTATAGTGGT
ATCCGCTTGGAGGTGACGATCTCAGCTTTCTGGCCGTGCTGCTTTTTACC
TTCGACAACAAAGCGCAGCAGTCAGGGCAAGCGAGTCAACATGAGCACTA
TAAAACCTTTCGTTGCACAGAGTTTAGTATTTTCCTCCTGGGTTTCCCGA
ACCAACATGCACAACCAATAGTTCATGAAACGCTAGAATGAGACGCTTTT
TGTTGCAAATTTTATGCATAGGAAAACGACGCAACCAGGTATACCTGGTC
ATTTCGACGACATGAACAGGTTCGGGCAAAAAAAAAAATAGCCCTTATTC
AGACCATCTGATTGGCCGAGGCAGCCTCGTACCTCCTGCTGGCCGGAAAT
GTGATAGGGGAACCGGTGTGTCCTTTGAGAAAACTTTGCCTGTTTTTCGG
TCAGTACTTGTTCCTGGGGGAGATGATACCTGTTCCTGGCCGCTCCGTCG
AACGGAAATACGCTCGCCCACCCGATTGCCGTCGGTAGCACAGGGTGCTG
GTCGTTGCGCCTTACGCAGCCGACGCCATTTTGATTGGCAGGTGCTTTTT
GGCTCCTCGTCTCAAAGATGTGACCGTTGCCCTCAAGCAGCTCTTGAGGT
GACACACTGCAAATGCGGGTTCGCACAGTGTGTCACTGCTCATGAAGTGG
CGTGCGGCGCACATGCGAGTTTGCACAGTGTGTCCCCCCCGCCATCGCGT
CAAGTGACGTGCGGCGAAAGTGCAGGTTTGCATATTTCGTCACGCACACC
ATTTCATCATGTTGTGACGTGCGGCGCAAAGCTGGAGGAGCCTTCAAGCC
GCGATGATAGTGCCAGAATTTGTACAGTCTACCAACGAGAGCAGTTTTGC
ACACCCACCCACGGCAGCCTCTCTGATGTGGCCCATGGCCTCGTTCTAGA
TGGCTGCAAGTAGTAGTAGCAGTAAGCAAACTACTAGTAGTAGGAGTAGG
AGTAGGAGTGAAGACGAGTCCCATGGGCACCGGCCGTGGCTAAATCTTGT
GGATCTAGCTGCTCGTTCTTTTGGTGGGCGTGGCACACTGTGCAAACCGA
CAATTTCGCCACACTCCACCTGACGAGATAGCAGGGGTGACACACTGTGC
AAACTGATATCTGGGGAGCACGTCACTTCATGAGATGGCGGCAGTGACAC
ACTGTGCGAACCCGCATTTGCACAGTGTGTCACTTCAAGAGCTGCTTGAG
AGCAAGGGTCACATCTTTGAGAAGAGGAGCCAAAAAAAGCTCCTGCCAAT
CAAAATGGCGTCGGCTTCGTAAAGCGAAACGACCAACACCCTATGCTACC
GACGGCAATCGGGGGAGCGTTTTGCCGTTCGACGGAACGGCCAGGAACAG
ATGCGATCTCCCCCAGGAACAAGTGCTGACCGAAAAACAGGCACAGTTTT
CTCAAAGGACACAAACCGGTTCCTCTATCACATTTCCGGCCAGCAGGAGG
TACGAGGCTTCCTCGGCCAATCAGATGGTCTGAATGAGGGCTATTTTGCA
TTTGTTTTTGGCGTGTACCTGTTCATGTCGTCGAAGTGACCAGGTATACC
TGGTTGTGTCCTTCTCCCTGTCTTAATTCTTGATAGTTTGCGAGATATTG
GCACTCAACGTCAGATAGCCACGACATTTCTGCATTCCAGCTTCCTGCTG
AAGTATCAAACAAGTGAACTTAACTCGGCACCAGCACATTTTTTTCACTC
CACTTGTTTTCACCGTGCTCGCCTCGTTACGCCCGCGTTGCGCTATCGTT
TATCGAACACCTCGAAAAGATGTCCTGCACAGCATCTTCTCCACAATACC
AACTCGCCAGCACCAAATTTACGAAAACAATGATAAATTAACGGGAAACA
CGCAAAATCTGCTTGTTTTCCTCAATTTCTCAGTTTCACCTCGAGGACGC
TATACGAAGGAGCATACCTCGGTGCCAGGATTTTATTTTCGAAACACAAT
TTTCTGGTACATCTTCACCTCATCGTCACATTGAATGCGTGCCGTCGCTT
GTTTTTTGGGTGTCAATATTCGGCGAGATACCAGCAACTACTACCTGCAA
TATTCCGCCGTTGTAGCTGCCCGTAAAGGCAGCCTACGGTGTCATACGAG
CAATCTCCTGTTTTTTCTTGCTCGTCCTATCATAACCCCGTAGTCTACCT
CGCTCCCGATGTCCTCATTCGCCATGGGAGTGCATAATCGCTAGCCGGGG
GTTGCCTACACAATCGATCAACATGCCAAGCAACATTTTGCGACGTCACC
AGCAGCGTTCAGCTCTGCATTAACCATAGGCTCCAAAATTGGTTTATTTC
GTCTGTTCATGGTAAAGTGAAGTACCTCCTGGACGATGGAACGGGATTAC
TGCAATGCACGCAATACGAGCGTGATAACCGAAGCGGTGACCTGCATCAA
GGCCACGGAAAAAGGCACGAGCTGGGAGAGTTTTTGATCGTGCAGGGCAG
GCTAAAGCGCTACAGAGGGTGAGGACGCTTTCCCTTCATGCACTAAGAGT
TGCTTCGTATTACATGACACTGCGCATTTGTTGGTGTTCTATCCCACTTT
GAAAGCTGTTTGTTGTACTATCATAGATCTCCTGTATTGTGCAGAAGTCG
TTCTTGTTAAGTGCTTCAGAAATGGTGTGCCTCGACCAAGACGATGTTGA
GCGAACGAGTGCACTGCGTAGATCATAGGATAGTGCCGTTGGCTTATTTG
ACCACTTGCTATTCCAAGCGTGCGAGTGCATTGCGTACATCATGAGACAG
TGCCGTCGGCTTATTTGACCCGTCTCCATCTCAAGCACTAGTCCTATTGG
ACGATGTAGATTGCATATTCATGGATTGCAAGCACTTGGCCTATTGGGGG
ATATAGATTGCATGATCACAGATTGCATTTTCACTTTTGGTAGCGGCTAT
AGCTATCAAGTGCAGGAGGTGAAGATTGTTTTGAGTACTCGAACGACAGT
TGACATCAAACGCCGTCGGGATTTCTGCGTTACACACAATATGCGTATTC
GTCGTGGTTTCGTGGCACCATATGTCATGAACGTGATGCAGGGCCCGAGA
AGTAGTCGTTGCTTCCATTGCGAAGCCCACAGATCCAAACGAGGAAGTCC
TTCGGCGTTTACAGTGCATCGAGCTGGCCAAGACGGTCTACAAACCTCCC
TTTCGGGTGGGTCTGAGCAGCTATAGTTTTGACTTTTTTTTGCAAATTTT
TCTGCCACAGGCATGACGCCTGCCGCCAGAAGGGTTACGATTTGTTACGC
AGAGTTATGACGAGAATCTAGTCTTTTTGTGCAGTGAGGGCAATTTTTGC
CCTCGAAAACGTCGCTCATTTGGTCTTCGAATGTAGAAAATTCAACTTAC
AGCACTGCGCTCTTGTTTTCAGTATTGCGACTGCTTGTTCATTAGCCCCT
TCGCTCCACGTACTGTTCCCCCATGGTGTGCATGCTACCATCCATGCCGA
ACAGCGTGATGAGTACGTGGATGACGAACTTATACTAAGCTCAAGTCAAT
CAAGACCGTCACGCTGCGAGTGTGGCGCTGACTACGCAGATGCCATGGGT
TATTGTCGATGTGTAGCGGCTCCTCTCGCGTGCGATCCTTCGTTCGAGTT
CCGAGACGCCTTGCTCAGCCACCTCTCCGCTAAGGAGGAATCCCTGCCTC
TCGGGAAACACCTTCGATTCCAATTTGCCCGAGACGTCAGAGACAACCCG
TCACTGAAGGACTCCGCAGTTCGAATTGTTTTGGCAGATCGCTCAACGCC
AGTTGGCCCCGAGGTCAGAGAAAGCGCGGCGGGCGGAGGCAGCATCAGCG
ACGGCCGCGACGGGACGCGCGAGGCGCGTAATGTCGTCGATCTTTCACGT
GTTACGCATGGATCTATTGCTATCAAGACAAGGCATAGCGATGCCAGCCG
CCGCGAAGGGCGTGCCATCTCCGAAACGGTTCTTAACGCTAAAGTGATGG
AGCTATTGCGCGCGGTTATGTTCAGCCTGCAAAGGGACGGCGCAGTGCAT
TTCTCAGACAAGGCTGAGGATGTATACGTGCTGTTGTCTCGGGGGAAGGT
GTTGCAGCCGCATGTGCAGGCGGTCTGTCGCGAGCGGGGACTGAACTTGA
ATCAGGACAATGAGATCATTAGGGCCTTACAAAGCACCGCGCTGTTTCAT
CACGTTTCTGGTGCACGGATACGGGCTTGCATTCGGCACATGAAGGCATC
GTCGGAGCCAAAAGAAGAGACCTGA
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Coding sequence (CDS) from alignment at H-fluviatilis_contig1033:14269..20093-

>mRNA_H-fluviatilis_contig1033.670.1 ID=mRNA_H-fluviatilis_contig1033.670.1|Name=mRNA_H-fluviatilis_contig1033.670.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=2562bp|location=Sequence derived from alignment at H-fluviatilis_contig1033:14269..20093- (Heribaudiella fluviatilis SAG_13_90)
ATGCAAAGGCTAGGAGTTCCCGACCAAGGATGGGAAAATGATTCAGAATC
GACTGAGGCGACGACACGAGACACGAGTGCACGCTCCTCGTACACGCAAA
AGTATTCCCACGGGCCAACTGTGGGACTTCGGGTGCATGAGTGGGGGCTC
AACCCGCTGTTTTGGATGCAAAGGCTAGGAGTTCCCGACCAAGGATGGGA
AAATGATTCAGAATCGACTGAGGCGACGACACGAGACACGAGTGCACGCT
CCTCGTACACGCAAAAGTATTCCCACGGGCCAACTGTGGGACTTCGGGTG
CATGAGTGGGGGCTCAACCCGCTGTTTTGGAGCTACGTGAAGCTGTTTGC
GCGAGACGTTCACGCTCTGGGTACACTATCAGGTATCGACAACTCGCATG
TCTTGCACGGAAAGGCTGCGCACCGAGTGGAGGTGTCGGGAATAGTAGTG
CACATCAAGCCTGGCCAGACGAAGACCTTCGGGAGCTACGAGCTACGTGA
AGCTGTTTGCGCGAGACGTTCACGCTCTGGGTACACTATCAGGTATCGAC
AACTCGCATGTCTTGCACGGAAAGGCTGCGCACCGAGTGGAGGTGTCGGG
AATAGTAGTGCACATCAAGCCTGGCCAGACGAAGACCTTCGGGAGCTACG
TGAAGTACCTCCTGGACGATGGAACGGGATTACTGCAATGCACGCAATAC
GAGCGTGATAACCGAAGCGGTGACCTGCATCAAGGCCACGGAAAAAGGCA
CGAGCTGGGAGAGTTTTTGATCGTGCAGGGCAGGCTAAAGCGCTACAGAG
GTGAAGTACCTCCTGGACGATGGAACGGGATTACTGCAATGCACGCAATA
CGAGCGTGATAACCGAAGCGGTGACCTGCATCAAGGCCACGGAAAAAGGC
ACGAGCTGGGAGAGTTTTTGATCGTGCAGGGCAGGCTAAAGCGCTACAGA
GGGGCCCGAGAAGTAGTCGTTGCTTCCATTGCGAAGCCCACAGATCCAAA
CGAGGAAGTCCTTCGGCGTTTACAGTGCATCGAGCTGGCCAAGACGGTCT
ACAAACCTCCCTTTCGGGGCCCGAGAAGTAGTCGTTGCTTCCATTGCGAA
GCCCACAGATCCAAACGAGGAAGTCCTTCGGCGTTTACAGTGCATCGAGC
TGGCCAAGACGGTCTACAAACCTCCCTTTCGGCGTGATGAGTACGTGGAT
GACGAACTTATACTAAGCTCAAGTCAATCAAGACCGTCACGCTGCGAGTG
TGGCGCTGACTACGCAGATGCCATGGGTTATTGTCGATGTGTAGCGGCTC
CTCTCGCGTGCGATCCTTCGTTCGAGTTCCGAGACGCCTTGCTCAGCCAC
CTCTCCGCTAAGGAGGAATCCCTGCCTCTCGGGAAACACCTTCGATTCCA
ATTTGCCCGAGACGTCAGAGACAACCCGTCACTGAAGGACTCCGCAGTTC
GAATTGTTTTGGCAGATCGCTCAACGCCAGTTGGCCCCGAGGTCAGAGAA
AGCGCGGCGGGCGGAGGCAGCATCAGCGACGGCCGCGACGGGACGCGCGA
GGCGCCGTGATGAGTACGTGGATGACGAACTTATACTAAGCTCAAGTCAA
TCAAGACCGTCACGCTGCGAGTGTGGCGCTGACTACGCAGATGCCATGGG
TTATTGTCGATGTGTAGCGGCTCCTCTCGCGTGCGATCCTTCGTTCGAGT
TCCGAGACGCCTTGCTCAGCCACCTCTCCGCTAAGGAGGAATCCCTGCCT
CTCGGGAAACACCTTCGATTCCAATTTGCCCGAGACGTCAGAGACAACCC
GTCACTGAAGGACTCCGCAGTTCGAATTGTTTTGGCAGATCGCTCAACGC
CAGTTGGCCCCGAGGTCAGAGAAAGCGCGGCGGGCGGAGGCAGCATCAGC
GACGGCCGCGACGGGACGCGCGAGGCGCGGCGTGCCATCTCCGAAACGGT
TCTTAACGCTAAAGTGATGGAGCTATTGCGCGCGGTTATGTTCAGCCTGC
AAAGGGACGGCGCAGTGCATTTCTCAGACAAGGCTGAGGATGTATACGTG
CTGTTGTCTCGGGGGAAGGTGTTGCAGCCGCATGTGCAGGCGGTCTGTCG
CGAGCGGGGACTGAACTTGAATCAGGACAATGAGATCATTAGGGCCTTAC
AAAGCACCGCGCTGTTTCATCACGTTTCTGGTGCACGGATACGGGCTTGC
ATTCGGCACATGAAGGCATCGTCGGAGCCAAAAGAAGAGACCTGAGGCGT
GCCATCTCCGAAACGGTTCTTAACGCTAAAGTGATGGAGCTATTGCGCGC
GGTTATGTTCAGCCTGCAAAGGGACGGCGCAGTGCATTTCTCAGACAAGG
CTGAGGATGTATACGTGCTGTTGTCTCGGGGGAAGGTGTTGCAGCCGCAT
GTGCAGGCGGTCTGTCGCGAGCGGGGACTGAACTTGAATCAGGACAATGA
GATCATTAGGGCCTTACAAAGCACCGCGCTGTTTCATCACGTTTCTGGTG
CACGGATACGGGCTTGCATTCGGCACATGAAGGCATCGTCGGAGCCAAAA
GAAGAGACCTGA
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