mRNA_H-fluviatilis_contig103123.651.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
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Overview
Homology
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 134 bits (337), Expect = 1.650e-35 Identity = 57/144 (39.58%), Postives = 87/144 (60.42%), Query Frame = 1
Query: 19 NTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFICAVSRPDPSRGFDGKIGVWHVCVIKQAQRSTARRSKG-----------------------DEYECGVNIDADWYQEWCTEIFLPEVKDKMPWLKGAEAI 381
N +H+DESWFY++R+ E+V +F GE+ G +V H SH+ K++ I A +RPDP+ FDGKIG+W +CVI+ AQRS+ + + +EYE IDA+WY++W ++ LP +K+KMPWL+ +
Sbjct: 153 NVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVV 296
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 84.7 bits (208), Expect = 1.310e-16 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 1
Query: 16 FNTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFICAVSRP----DPSRGFDGKIGVWHVCVIKQAQRSTARRSKGDEYECGV-NIDADWYQEWCTEIFLPEVKDKMP 357
++TIHIDE WFY+ ++ + GE ST + + I K++F+CAV+RP D + GFDGKIG+W V + AQR++ R +G + +++A YQ+ E LP +++K P
Sbjct: 230 YDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFP 347
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 2.590e-16 Identity = 42/118 (35.59%), Postives = 69/118 (58.47%), Query Frame = 1
Query: 16 FNTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFICAVSRP----DPSRGFDGKIGVWHVCVIKQAQRSTARRSKGDEYECGVNIDADWYQEWCTEIFLPEVKDKMP 357
F+ +H+DE WFY+ + G+R + GE + KVQH+SH+ K++F+ AV+RP SR FDGKIG++ V + AQR+ + G V ++ Y++ +F P+++ K P
Sbjct: 55 FDFLHLDEKWFYICKQGQRYYFYEGEH-LPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYKKLNNNVF-PDIRAKFP 170
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: A0A0W8C4B7_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C4B7_PHYNI) HSP 1 Score: 80.5 bits (197), Expect = 2.310e-15 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 1 MFVSGFNTIHIDESWFYVIRDGERVPMFPGEERVGSTK-----VQHRSHISKLVFICAVSRPDPSRG-FDGKIGVWHVCVIKQAQRSTARRSKGDEYECGVNIDADWYQEWCTEIFLPEVKDKMPWLK 366
+F ++T+H+DE WFYV + G++V + G++ VQ + HI K++F+CAV+RP RG +DGK+G+W V QR + R G E +++ + Y+ E +P +K K W++
Sbjct: 47 VFAPMYDTVHVDEKWFYVKKIGQKVYLLTGQDGTPCEDAPVQFVQSKRHILKVMFLCAVARP---RGNWDGKVGMWPVVEKYVTQRRSVNRDAGVEELRPISMTREVYRRMLLEDVIPAIKAKWEWVR 171
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: A0A485LIJ5_9STRA (Aste57867_21562 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIJ5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.360e-14 Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 16 FNTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFICAVSRP----DPSRGFDGKIGVWHVCVIKQAQRSTARRSKGDEYECGVNIDADWYQEWCTEIFLPEVKDKMP 357
++T+H+DE WF++ + V PGE ++ + + H+ K++F+ AV+RP + + FDGKIG WH A+R + RR G V++D Y+ + +P ++DK P
Sbjct: 2 YDTVHVDEKWFFMSWIKKTVYGAPGE-KIKQPTCKFKQHLLKIMFLSAVARPRLDNETNELFDGKIGTWHFTETVLAKRRSCRRDAGTPIMKSVSVDRTTYKAMLIDKVIPAIRDKWP 118
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: A0A485L7X2_9STRA (Aste57867_17524 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7X2_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 5.580e-14 Identity = 39/118 (33.05%), Postives = 66/118 (55.93%), Query Frame = 1
Query: 16 FNTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFICAVSRP--DPSRG--FDGKIGVWHVCVIKQAQRSTARRSKGDEYECGVNIDADWYQEWCTEIFLPEVKDKMP 357
++T+H+DE WF++ R ++V PGE ++ + + H+ K++F+ AV+RP D ++ FDGK+G WH I AQR + RR G V + D Y+ + +P ++ K P
Sbjct: 167 YDTVHVDEKWFFMTRLQKKVYGAPGE-KIKQRSCKSKRHLLKVMFLSAVARPRWDEAKQEWFDGKVGTWHFTEIVPAQRRSRRRDAGTLVMKTVPVTRDAYRAMLVDNVIPAIRSKWP 283
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: UPI0006A6D7E0 (uncharacterized protein LOC106302859 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6D7E0) HSP 1 Score: 71.2 bits (173), Expect = 1.470e-12 Identity = 37/123 (30.08%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 4 FVSGFNTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFICAVSRP----DPSRGFDGKIGVWHVCVIKQAQRSTARRSKGD-EYECGVNIDADWYQEWCTEIFLPEVKDKMP 357
FV +N++HIDE WFY+ + E+ + P EE V Q ++HI+K++F+ A++RP + + F GKIG++ ++ AQR + R G E + ++ + + + E +P + ++ P
Sbjct: 57 FVDMYNSVHIDEKWFYMTKKTEKYYVVP-EEEVPHRTCQSKNHITKVMFLAAMARPRFDYEGNETFSGKIGIFPFVTLQPAQRRSKNREAGTLERKALTSVKREDIKAYLIEKVIPIIHERWP 178
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: A0A024U573_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U573_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.710e-12 Identity = 39/123 (31.71%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 16 FNTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFICAVSRP----DPSRGFDGKIGVWHVCVIKQAQRSTARRSKGDEYECGVNIDADWYQEWCTEIFLPEVKDKMPWLKGA 372
++++H+DE WF+ R + + PGE+ T + + I K++F+ AV+RP + FDGKIG WH + A+RS+ R G V + Y++ + +P +K K W KGA
Sbjct: 58 YDSVHVDEKWFFATRVKQTYYLAPGEKPPHRT-CKSKRFIKKVMFLSAVARPRWNDESGEWFDGKIGTWHFTELVPAERSSRNRPAGTLVTTPVAVTRPVYKDMLVKHVIPAIKTK--WPKGA 177
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: A0A6A4YBC0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YBC0_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.280e-12 Identity = 39/119 (32.77%), Postives = 65/119 (54.62%), Query Frame = 1
Query: 16 FNTIHIDESWFYVIRDGERVPMFPGEE-RVGSTKVQHRSHISKLVFICAVSRP----DPSRGFDGKIGVWHVCVIKQAQRSTARRSKGDEYECGVNIDADWYQEWCTEIFLPEVKDKMP 357
++T+HIDE WF++ R ++V PGE+ + S K +H + ++F+ AV+RP D + FDGK+G+WH + A R + RR G V + D Y+ + +P ++ K P
Sbjct: 152 YDTMHIDEKWFFMTRLQKKVYGAPGEKTKQRSCKSKH--FLLHVMFLSAVARPRWDDDKQQCFDGKLGIWHFTEVVPAVRRSCRRDAGTPVMKTVAVTRDTYRSMLIDKVIPSIRAKWP 268
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.910e-12 Identity = 41/118 (34.75%), Postives = 60/118 (50.85%), Query Frame = 1
Query: 16 FNTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFICAVSRP--DPSRG--FDGKIGVWHVCVIKQAQRSTARRSKGDEYECGVNIDADWYQEWCTEIFLPEVKDKMP 357
F+ +HIDE WF V + RV + P E QH+SH+ KL+F+CA++RP DP+ G FD IG+W A RS++ R G + + + Y+ +P V K P
Sbjct: 25 FDRVHIDEKWFVVNKTKRRVYLTPTEPNP-QRHAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIWPFAEEIPAYRSSSNRQAGTLETKPLPANKETYKAMIMTEVVPAVVSKWP 141 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103123.651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig103123.651.1 >prot_H-fluviatilis_contig103123.651.1 ID=prot_H-fluviatilis_contig103123.651.1|Name=mRNA_H-fluviatilis_contig103123.651.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=129bp MFVSGFNTIHIDESWFYVIRDGERVPMFPGEERVGSTKVQHRSHISKLVFback to top mRNA from alignment at H-fluviatilis_contig103123:364..750- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig103123.651.1 ID=mRNA_H-fluviatilis_contig103123.651.1|Name=mRNA_H-fluviatilis_contig103123.651.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=387bp|location=Sequence derived from alignment at H-fluviatilis_contig103123:364..750- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig103123:364..750- >mRNA_H-fluviatilis_contig103123.651.1 ID=mRNA_H-fluviatilis_contig103123.651.1|Name=mRNA_H-fluviatilis_contig103123.651.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=774bp|location=Sequence derived from alignment at H-fluviatilis_contig103123:364..750- (Heribaudiella fluviatilis SAG_13_90)back to top |