mRNA_H-fluviatilis_contig103100.647.1 (mRNA) Heribaudiella fluviatilis SAG_13_90
|
Overview
Homology
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: A0A8K1FFW6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFW6_PYTOL) HSP 1 Score: 106 bits (265), Expect = 1.800e-24 Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 10 RHSNGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAWCNS 339
R NG +D +E +GLS+LC+ + D K+KAAF L+D +GDGFI+ DEM+RY+TS F+V +Y V P +G TA+ F ADLN DG++SYDEF W NS
Sbjct: 1335 RDHNGRIDFSELASGLSVLCKGARDAKVKAAFRLYDFNGDGFISLDEMIRYLTSIFKV--LYEVQPQMKNETGVSAEELGAITAEQAFMEADLNHDGKLSYDEFLTWYNS 1442
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: A0A1V9ZAL1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAL1_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.440e-24 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 19 NGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAW 330
N VD +E +GLS+LC+ S D K+KAAFSL+D +GDG+I+ DEM+RY+TS F V +Y VSPH ++ +G ATAK F AD N DG++S EFT W
Sbjct: 1145 NNAVDFSELASGLSVLCKGSRDLKVKAAFSLYDYNGDGYISMDEMIRYLTSVFRV--LYEVSPHMALETGVSAVELGAATAKQAFAEADTNHDGKLSLAEFTEW 1246
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: A0A662WUA9_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUA9_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.430e-23 Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 10 RHSNGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAWCNS 339
R NG +D +E +GLS+LC+ + D K+KAAF L+D + DGFI+ DEM RY+TS F+V +Y V P +GV TA+ F AD N DG++SYDEF W NS
Sbjct: 1311 RDGNGRIDFSELASGLSVLCKGARDAKVKAAFRLYDFNADGFISLDEMKRYLTSIFKV--LYEVQPEMRQETGVTAEELGVVTAEQAFLEADSNRDGKLSYDEFLTWYNS 1418
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: A0A3R7H6Z0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H6Z0_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.440e-23 Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 10 RHSNGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAWCNS 339
R NG +D +E +GLS+LC+ + D K+KAAF L+D + DGFI+ DEM RY+TS F+V +Y V P +G+ TA+ F AD N DG++SYDEF W NS
Sbjct: 885 RDGNGQIDFSELASGLSVLCKGARDAKVKAAFRLYDFNADGFISLDEMKRYLTSIFKV--LYEVQPEMRKETGVSAEELGIVTAEQAFLEADSNHDGKLSYDEFLTWYNS 992
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: G4YZI8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZI8_PHYSP) HSP 1 Score: 101 bits (252), Expect = 1.020e-22 Identity = 50/109 (45.87%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 16 SNGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAWCNSG 342
++ VD E +GLS+L +S DDK++AAF L+DI+GDG+IT +EM+ YMTS F+V MY + + + ATA+ CF+ ADLNGD ++S++EF WC SG
Sbjct: 2319 NSNTVDFGELASGLSVLSGSSMDDKVRAAFQLYDINGDGYITQEEMISYMTSIFKV--MYETTDSTKTKMGVSPEELARATAEQCFKEADLNGDNKLSFEEFKKWCTSG 2425
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: A0A6G0SMC9_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6G0SMC9_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.020e-22 Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 10 RHSNGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAWCNS 339
R NG +D +E +GLS+LC+ + D K+KAAF L+D + DGFI+ DEM RY+TS F+V +Y V P +GV TA+ F AD N DG++SYDEF W NS
Sbjct: 1286 RDGNGQIDFSELASGLSVLCKGARDAKVKAAFRLYDFNADGFISLDEMKRYLTSIFKV--LYEVQPEMRQETGVSPEELGVVTAEQAFLEADSNHDGKLSYDEFLTWYNS 1393
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: A0A812YZT0_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YZT0_9DINO) HSP 1 Score: 100 bits (248), Expect = 1.330e-22 Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 19 NGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAWCNSG 342
+GV+D E +GLS+LC D+K++AAF LFD +GDG+IT DEM Y+ S F + +Y P ++ T + ATA+ CFE ADLN D R+S++EF W N+G
Sbjct: 134 DGVIDVTELCSGLSVLCAGDRDNKVRAAFDLFDKNGDGYITLDEMKTYLNSVFRI--LYNFQPDLEDSVGASVTELATATAEQCFEEADLNQDSRLSFEEFRRWYNAG 239
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: T0RAF3_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RAF3_SAPDV) HSP 1 Score: 100 bits (250), Expect = 1.890e-22 Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 1 AHGRHSNGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAW 330
A + N VD +E +GLS+LC+ S D K+KAAFSL+D +GDG+I+ DEM+RY+TS F V +Y VSP + +G ATAK F AD N DG++S +EFT W
Sbjct: 1156 AFDQDQNERVDFSELASGLSVLCKGSRDLKVKAAFSLYDYNGDGYISMDEMVRYLTSVFRV--LYEVSPGMATETGVSAAELGAATAKQAFVEADTNHDGKLSLEEFTEW 1263
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: A0A3M6VB29_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB29_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.900e-22 Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 19 NGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAW 330
NG VD E +GLS+LC S ++K++AAFSLFD++ DGFI+ DEM+RY++S F+V +Y SP + L + V TA+ CF DLN DG++S+DEF AW
Sbjct: 2080 NGTVDFCELSSGLSILCGGSREEKVRAAFSLFDLNKDGFISLDEMVRYLSSVFKV--LYETSPGTNEKLGVRPEELAVITAEQCFLEGDLNEDGKVSFDEFVAW 2181
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Match: A0A2P4X673_9STRA (Calcium-binding protein NCS-1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X673_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.120e-22 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 10 RHSNGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEMLRYMTSFFEVNGMYCVSPHFSIALFNFGTLVGVATAKHCFERADLNGDGRISYDEFTAWCNS 339
R NG +D +E +GLS+LC+ + D K+KAAF L+D + DGFI+ +EM RY+TS F+V +Y V P +G+ TA+ F AD N DG++SYDEF W N+
Sbjct: 208 RDGNGQIDFSELASGLSVLCKGARDAKVKAAFRLYDFNADGFISLEEMKRYLTSIFKV--LYEVQPEMRQETGVSADELGIVTAEQAFLEADSNHDGKLSYDEFLTWYNA 315 The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103100.647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-fluviatilis_contig103100.647.1 >prot_H-fluviatilis_contig103100.647.1 ID=prot_H-fluviatilis_contig103100.647.1|Name=mRNA_H-fluviatilis_contig103100.647.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=114bp AHGRHSNGVVDHAEFVAGLSLLCRASSDDKIKAAFSLFDIDGDGFITYDEback to top mRNA from alignment at H-fluviatilis_contig103100:95..657- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-fluviatilis_contig103100.647.1 ID=mRNA_H-fluviatilis_contig103100.647.1|Name=mRNA_H-fluviatilis_contig103100.647.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=563bp|location=Sequence derived from alignment at H-fluviatilis_contig103100:95..657- (Heribaudiella fluviatilis SAG_13_90)back to top Coding sequence (CDS) from alignment at H-fluviatilis_contig103100:95..657- >mRNA_H-fluviatilis_contig103100.647.1 ID=mRNA_H-fluviatilis_contig103100.647.1|Name=mRNA_H-fluviatilis_contig103100.647.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=684bp|location=Sequence derived from alignment at H-fluviatilis_contig103100:95..657- (Heribaudiella fluviatilis SAG_13_90)back to top |