mRNA_H-fluviatilis_contig10310.646.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig10310.646.1
Unique NamemRNA_H-fluviatilis_contig10310.646.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.500e-114
Identity = 169/246 (68.70%), Postives = 199/246 (80.89%), Query Frame = 1
Query:    1 RRYIESG-CATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTIH 735
            R Y+E+G C TL++I+E+R    G  GPLYP+DE T  +    TGSWYL S++Y+T GS LVV+G   GGDCD LLLAS+  KFIN+RAHGG L  + THVESWDL      G  DE+ EDGRSY+SAISEV+TDPA  C+GTA+NDMGEAR+DII+SEVNHLGWYDSESYGIAYKVRGFCKDLSNPE+FD VSVTGD+ GS IH  YFGHYS+GHQGGN+S+N++H N GYGFDPHDDSDY+TIH
Sbjct:   73 RLYLENGACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDL----AAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIH 314          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 5.650e-110
Identity = 164/247 (66.40%), Postives = 198/247 (80.16%), Query Frame = 1
Query:    1 RRYIESG-CATLSEIFEARYAKYG--LTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTI 732
            R Y+E+G CAT+++I+E+R   Y     GP+YP+DE T  + +N TGSWYL SS+YVT G+ LVV+G   GGDCD LLLAS+  KFINVRA+GG +  + THVESWDL      G  DE+++DGRSY+SAISEV+ +PA  CEG A NDMGEAR+DII+SE+NHLG Y+SESYGIAYKVRGFC DLSNPE+F+ V VTGD+ GSHIHHLYFGHYS+GHQGGN+S N VHDN GYGFDPHDDSDY+TI
Sbjct:   63 RLYLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLL----EGTVDENYDDGRSYLSAISEVIINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTI 305          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 3.730e-107
Identity = 166/265 (62.64%), Postives = 195/265 (73.58%), Query Frame = 1
Query:    4 RYIESG-CATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNH--------------------LGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTIH 735
            +Y+E+G C TL++I+E+R    G  GPLYP+DE    +    TGSWYL SS+Y+T GS LVV+G   GGDCD LLLAS+  KFINVRAHGG L  + THVESWDL      G  DE+ EDGRSY+SAISEV+TDP   C+GTA+NDMGEAR+DII+SEVN                     LGWYDSESYGI+YKVRGFC DLSNPE+FD VSVTGD+ GS IH  YFGHYS+GHQGGN+S+N++H N GYGFDPHDDSDYLTIH
Sbjct:   34 KYLENGACVTLTDIYESRSDDSGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDL----AAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIH 294          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 6.120e-85
Identity = 138/254 (54.33%), Postives = 176/254 (69.29%), Query Frame = 1
Query:    1 RRYIES--------GCATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTIHD 738
            R Y+ES        GC TL +I+E+R  K    GPLY  D  +  +  +ATG+W L   +YV  G +L V G+E GGD D L L S    FIN+RAHGG+L F  T V SWD + N      DED  DGRSYISAISE++TD    CEG A+N MGEAR+DI +SE+ +LG++DSESYG+ +KVRGFC+D SNPE+FDDV+V G++  S IHH+ FG Y++GHQ G++  N++HDN GYGFDPHDDSD+LTIHD
Sbjct:   54 RLYLESADNGTTRGGCVTLGQIWESRAGK----GPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTN----SPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHD 299          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 6.510e-84
Identity = 141/253 (55.73%), Postives = 174/253 (68.77%), Query Frame = 1
Query:    1 RRYIES-------GCATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTIHD 738
            R Y+ES       GCATL +I+E+R  K     PLY  D  +  +    TG+W L   +YV  G +L V GT+ GGD D L L S +  +IN+RAHGG+L F  T V SWD + N      DED  DGRSYISA+SE+VTD    CEG A+N MGEAR+DI NSE+ +LG+ DSESYG+ +KVRGFCKD SNPEIFDDV+V G+M  S IHHL FG Y++GHQ G++  N++HDN GYGFDPHDDSD+LTIHD
Sbjct:   59 RLYLESADGETRGGCATLGQIWESRAGK----APLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTN----SPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHD 303          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 1.160e-83
Identity = 138/254 (54.33%), Postives = 176/254 (69.29%), Query Frame = 1
Query:    1 RRYIES--------GCATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTIHD 738
            R Y+ES        GC TL +I+E+R  K    GPLY  D  +  +  +ATG+W L   +YV  G +L V G+E GGD D L L S    FIN+RAHGG+L F  T V SWD + N      DED  DGRSYISAISE++TD    CEG A+N MGEAR+DI +SE+ +LG++DSESYG+ +KVRGFC+D SNPE+FDDV+V G++  S IHH+ FG Y++GHQ G++  N++HDN GYGFDPHDDSD+LTIHD
Sbjct:   54 RLYLESADNGTTRGGCVTLGQIWESRAGK----GPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTN----SPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHD 299          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 1.240e-83
Identity = 139/253 (54.94%), Postives = 170/253 (67.19%), Query Frame = 1
Query:    1 RRYIES-------GCATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTIHD 738
            R Y+ES       GC TL +I+E R  K     PLY  D  +     N TG+W L   +YV  G +L V GT  GGD D L L S T  +IN+RAHGG+L F  T V SWD + N      DED  DGRSYISAISE++TD    CEG A+N MGEAR+DI NSE+ +LG+ DSESYG+ +KVRGFCKD SNP IFD+V+V G+M  S IHH+ FG Y++GHQ G++  N++HDN GYGFDPHDDSD+LTIHD
Sbjct:   58 RLYLESADGETRGGCVTLGQIWENRAGK----APLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTN----SPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHD 302          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: D7FMJ0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ0_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 2.430e-81
Identity = 139/249 (55.82%), Postives = 175/249 (70.28%), Query Frame = 1
Query:    1 RRYIES-----GCATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTI 732
            R Y+E      GC TL+EI+E+       + PLYP + ATN  V   TG W L   +YVT G  L V GT+ GGDCD L L S+ T FIN+RAHGG+  F  T V SW    N+G+G  D + EDGRSYISA+SEV+ DP   C GTA+++MGEAR+D+I+SE+  LG+Y+SESYG+ +KVRGFC D SN ++FD V+V GDM  S+IH  YFGHYS+GHQGGN+S N++H+N  YGFDPHDDSDYL I
Sbjct:  367 RIYVEQATNRGGCFTLTEIWESG------SRPLYPLEPATNERVDYVTGVWLLTEELYVTDGVILQVHGTDRGGDCDELRLLSDETTFINLRAHGGSFSFLGTKVVSW----NEGKGTVDTNHEDGRSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCIDKSNLDVFDFVNVYGDMINSNIHDNYFGHYSYGHQGGNWSYNKMHENVEYGFDPHDDSDYLHI 605          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 2.420e-77
Identity = 129/253 (50.99%), Postives = 173/253 (68.38%), Query Frame = 1
Query:    1 RRYIES-------GCATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTIHD 738
            R Y+ES       GC TL +I+E +  +     PLY  D  +  +  +ATG+W L   ++V  G +L V GT  GGD D L L S +  FIN+RAHGG+L F  T V +WD +IN    G D D EDGRSY+SA+SEV+TD +  C G A+N+MGEAR+DI +SE+ +LG++ SESYG+ +KVRGFC D SN ++F+DV+V G++  S IHH  FG Y++GHQ G++  N++HDN GYGFDPHDDSD+LTIHD
Sbjct:   52 RLYLESADSKTRGGCVTLEQIWEHQRGE----APLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSIN----GPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHD 296          
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 3.230e-74
Identity = 128/250 (51.20%), Postives = 175/250 (70.00%), Query Frame = 1
Query:    1 RRYIES-GCATLSEIFEARYAKY--GLTGPLYPYDEATNTL--VHNATGSWYLASSVYVTGGSSLVVRGTEVGGDCDRLLLASN-TTKFINVRAHGGNLYFEDTHVESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEARLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTGSHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTI 732
            R Y E  GC T+++++  R  +      GP+Y  D+    L      T +W LA+ +Y+TGG     +GT  GGDC++L + S  +  F  VR HGG+LYFEDT V SWD    + +    E +E+GRS+++ +SE +T     CEG A+N+MGE R+DIINSE+ +LG++DSESYG+ +KVRGFCKDLSNPE+F+  +V GD+TGS IHHLY+GHYS+GHQGG ++NN++HDN+ YGFDPHDDSDYLTI
Sbjct:  441 RLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQ----ETYENGRSFLNCVSEKLT--GDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTI 684          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig10310.646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZF8_ECTSI1.500e-11468.70Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FZF9_ECTSI5.650e-11066.40Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5KBD3_9PHAE3.730e-10762.64MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE5_ECTSI6.120e-8554.33Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI6.510e-8455.73Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI1.160e-8354.33Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE1.240e-8354.94MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FMJ0_ECTSI2.430e-8155.82Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE2.420e-7750.99Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D8LC73_ECTSI3.230e-7451.20Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig10310contigH-fluviatilis_contig10310:205..2246 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score252.7
Seed ortholog evalue2.4e-64
Seed eggNOG ortholog2880.D8LC73
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMannuronan C-5-epimerase
Ec32 orthologEc-19_003150.1
Exons5
Model size972
Cds size972
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig10310.646.1prot_H-fluviatilis_contig10310.646.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig10310 205..2246 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929075.8293207-CDS-H-fluviatilis_contig10310:204..4041622929075.8293207-CDS-H-fluviatilis_contig10310:204..404Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 205..404 -
1691135173.27978-CDS-H-fluviatilis_contig10310:204..4041691135173.27978-CDS-H-fluviatilis_contig10310:204..404Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 205..404 -
1622929075.8462262-CDS-H-fluviatilis_contig10310:622..7221622929075.8462262-CDS-H-fluviatilis_contig10310:622..722Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 623..722 -
1691135173.2906156-CDS-H-fluviatilis_contig10310:622..7221691135173.2906156-CDS-H-fluviatilis_contig10310:622..722Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 623..722 -
1622929075.8678503-CDS-H-fluviatilis_contig10310:1158..13491622929075.8678503-CDS-H-fluviatilis_contig10310:1158..1349Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 1159..1349 -
1691135173.2989502-CDS-H-fluviatilis_contig10310:1158..13491691135173.2989502-CDS-H-fluviatilis_contig10310:1158..1349Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 1159..1349 -
1622929075.9298954-CDS-H-fluviatilis_contig10310:1560..16731622929075.9298954-CDS-H-fluviatilis_contig10310:1560..1673Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 1561..1673 -
1691135173.3075721-CDS-H-fluviatilis_contig10310:1560..16731691135173.3075721-CDS-H-fluviatilis_contig10310:1560..1673Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 1561..1673 -
1622929075.944296-CDS-H-fluviatilis_contig10310:1878..22461622929075.944296-CDS-H-fluviatilis_contig10310:1878..2246Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 1879..2246 -
1691135173.318543-CDS-H-fluviatilis_contig10310:1878..22461691135173.318543-CDS-H-fluviatilis_contig10310:1878..2246Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig10310 1879..2246 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig10310.646.1

>prot_H-fluviatilis_contig10310.646.1 ID=prot_H-fluviatilis_contig10310.646.1|Name=mRNA_H-fluviatilis_contig10310.646.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=324bp
RRYIESGCATLSEIFEARYAKYGLTGPLYPYDEATNTLVHNATGSWYLAS
SVYVTGGSSLVVRGTEVGGDCDRLLLASNTTKFINVRAHGGNLYFEDTHV
ESWDLNINDGRGGNDEDFEDGRSYISAISEVVTDPASICEGTAQNDMGEA
RLDIINSEVNHLGWYDSESYGIAYKVRGFCKDLSNPEIFDDVSVTGDMTG
SHIHHLYFGHYSFGHQGGNFSNNEVHDNYGYGFDPHDDSDYLTIHDNHVY
NNGWHGIIASKRCDHISIQNNNVHDNGKNGLMLHRSCDYATVKNNVAYDN
VDAGLAVYESSNVEIAGNTFYHNK
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mRNA from alignment at H-fluviatilis_contig10310:205..2246-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig10310.646.1 ID=mRNA_H-fluviatilis_contig10310.646.1|Name=mRNA_H-fluviatilis_contig10310.646.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=2042bp|location=Sequence derived from alignment at H-fluviatilis_contig10310:205..2246- (Heribaudiella fluviatilis SAG_13_90)
CGCAGGTACATTGAGAGCGGATGCGCAACTTTATCCGAAATTTTCGAAGC GCGATACGCCAAATACGGCTTGACGGGGCCACTCTACCCGTACGACGAGG CCACCAACACCCTCGTACACAACGCCACGGGGTCGTGGTACCTCGCGTCC AGCGTATACGTTACCGGAGGCAGCTCTCTCGTGGTGCGAGGGACCGAGGT CGGCGGCGACTGCGACCGACTTTTGTTGGCGAGTAACACCACCAAATTCA TCAACGTCCGCGCTCATGGAGGCAACTTGTACTTCGAGGACACGCACGTA GAGTCTTGGGACTTGAACATAAACGACGGCCGCGGGGGCAACGATGAGGA CTTCGAGGATGGCCGGAGGTGAGAGGACGGGTTAACGAGGAAAGCGAATT TGACGGGGCGGAGATCGGAGGGTAGCCAGGTGTTACTTTTTCTTCATTTT TTCCGCAAAGCAGTAGTGGACTTCATTTTCGTCCCGAGCGTCTGGTTTAT GTTGCTGTCGTGATTGCACATGACGTGACTCTGAAATTTTTGTTTCTCGT TCTCGCAAACTTGCTTGCTGCAGTTACATCAGCGCTATCAGCGAGGTGGT CACCGACCCCGCCAGTATCTGCGAAGGGACCGCGCAAAACGATATGGGCG AGGCTAGGCTGGACATCATCAACTCGGAAGTCAACCGTGAGTTGTGCCGT AGTCACGAGGTCGTCCCTCCCTTTGGTTCATCGACCGAAAAGTTTTGCGC GTCGTCACACTGTCCTCACGGTCCGTGCACTTGAGCCTACGTCCTGGCAT ACAGGTAGCCCCGCCTCGCGCTGGTTGGTGAACTTTTTGTCCTTCGTTAT CCCCTCAGCACGATGTCTTCTGTCGCTCGCGTTGCAAACAAAAACAGACC TTGGATGGTATGACTCTGAGAGCTACGGCATCGCCTACAAGGTACGCGGG TTCTGCAAAGATCTCTCGAACCCCGAGATTTTCGACGACGTGTCGGTCAC GGGAGACATGACCGGTTCTCACATTCACCACCTCTACTTCGGCCACTACT CGTTCGGGCACCAGGGCGGGAACTTCAGCAACAACGAGGTATGTAGATGT GTGTGTTGTGTGTGGCGCAAGCGAACTTCGTTCTAAACTCGAGAGTGTAG TAAGCTTTTCGTTTGGAGGTGGTATCCGACGTTAGACACGATTCGGATCT CGGGGGAAGGTGAACACCCCCAGCGCCCGGTATACGTTCCTGCAGTAGCT CGTTTTCTGGGTCCGGTATTATACCGCTCATCATAGGGGCAACAACAAAA CCACGCCATTGTCCGGGATACGACGGCAGCGTTGGCTGGGCGACACGGAT GGCCGGGGGGGGGGAGGGGGGGGGTACATGGGGGGGGAAGATTGTGGAGT GTGATAGCGTGGTAGAGTTCCTTGCTCAGCAGATAGATGTGATTTTTCCG TCCGCAAAACGTGCTCTTAAACGATCGCGTTCTGTGTGTTTTGCCGGCTT ATTTGGTGTGTGTCTTGCTCTCAGGTACACGACAACTATGGCTACGGCTT CGACCCCCACGATGACAGCGACTACCTCACCATCCACGACAACCACGTCT ACAACAACGGGTGGCACGGAATTAGTGAGTGGCACTTGCAGCGGTCGGAA CTGGAATTTATTGCGGTTCTATTTGTGAGCAACAAACGGTGACGTTTACT TTTTTCGCTCAGAATCAAGGTCGTCTGACGAGCCTGAAAAGAGGAGATAT CATTGAAGCCAAAAAGTCATATCCAAACCCCGCGTTACATAGCTTACCCC TTAATACCCCCCCCCCCTCTCCGCACCCATTGCTTTTGTCAGTTGCGTCC AAGCGATGTGACCACATTTCCATCCAGAACAACAATGTCCATGACAACGG GAAGAATGGTTTGATGCTCCACCGCAGCTGCGACTACGCCACTGTCAAGA ACAACGTGGCGTACGATAATGTTGACGCTGGTCTTGCTGTTTACGAGAGC TCCAACGTCGAGATCGCCGGCAACACCTTCTACCACAACAAA
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Coding sequence (CDS) from alignment at H-fluviatilis_contig10310:205..2246-

>mRNA_H-fluviatilis_contig10310.646.1 ID=mRNA_H-fluviatilis_contig10310.646.1|Name=mRNA_H-fluviatilis_contig10310.646.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=1944bp|location=Sequence derived from alignment at H-fluviatilis_contig10310:205..2246- (Heribaudiella fluviatilis SAG_13_90)
CGCAGGTACATTGAGAGCGGATGCGCAACTTTATCCGAAATTTTCGAAGC
GCGATACGCCAAATACGGCTTGACGGGGCCACTCTACCCGTACGACGAGG
CCACCAACACCCTCGTACACAACGCCACGGGGTCGTGGTACCTCGCGTCC
AGCGTATACGTTACCGGAGGCAGCTCTCTCGTGGTGCGAGGGACCGAGGT
CGGCGGCGACTGCGACCGACTTTTGTTGGCGAGTAACACCACCAAATTCA
TCAACGTCCGCGCTCATGGAGGCAACTTGTACTTCGAGGACACGCACGTA
GAGTCTTGGGACTTGAACATAAACGACGGCCGCGGGGGCAACGATGAGGA
CTTCGAGGATGGCCGGAGCGCAGGTACATTGAGAGCGGATGCGCAACTTT
ATCCGAAATTTTCGAAGCGCGATACGCCAAATACGGCTTGACGGGGCCAC
TCTACCCGTACGACGAGGCCACCAACACCCTCGTACACAACGCCACGGGG
TCGTGGTACCTCGCGTCCAGCGTATACGTTACCGGAGGCAGCTCTCTCGT
GGTGCGAGGGACCGAGGTCGGCGGCGACTGCGACCGACTTTTGTTGGCGA
GTAACACCACCAAATTCATCAACGTCCGCGCTCATGGAGGCAACTTGTAC
TTCGAGGACACGCACGTAGAGTCTTGGGACTTGAACATAAACGACGGCCG
CGGGGGCAACGATGAGGACTTCGAGGATGGCCGGAGTTACATCAGCGCTA
TCAGCGAGGTGGTCACCGACCCCGCCAGTATCTGCGAAGGGACCGCGCAA
AACGATATGGGCGAGGCTAGGCTGGACATCATCAACTCGGAAGTCAACCT
TACATCAGCGCTATCAGCGAGGTGGTCACCGACCCCGCCAGTATCTGCGA
AGGGACCGCGCAAAACGATATGGGCGAGGCTAGGCTGGACATCATCAACT
CGGAAGTCAACCACCTTGGATGGTATGACTCTGAGAGCTACGGCATCGCC
TACAAGGTACGCGGGTTCTGCAAAGATCTCTCGAACCCCGAGATTTTCGA
CGACGTGTCGGTCACGGGAGACATGACCGGTTCTCACATTCACCACCTCT
ACTTCGGCCACTACTCGTTCGGGCACCAGGGCGGGAACTTCAGCAACAAC
GAGACCTTGGATGGTATGACTCTGAGAGCTACGGCATCGCCTACAAGGTA
CGCGGGTTCTGCAAAGATCTCTCGAACCCCGAGATTTTCGACGACGTGTC
GGTCACGGGAGACATGACCGGTTCTCACATTCACCACCTCTACTTCGGCC
ACTACTCGTTCGGGCACCAGGGCGGGAACTTCAGCAACAACGAGGTACAC
GACAACTATGGCTACGGCTTCGACCCCCACGATGACAGCGACTACCTCAC
CATCCACGACAACCACGTCTACAACAACGGGTGGCACGGAATTAGTACAC
GACAACTATGGCTACGGCTTCGACCCCCACGATGACAGCGACTACCTCAC
CATCCACGACAACCACGTCTACAACAACGGGTGGCACGGAATTATTGCGT
CCAAGCGATGTGACCACATTTCCATCCAGAACAACAATGTCCATGACAAC
GGGAAGAATGGTTTGATGCTCCACCGCAGCTGCGACTACGCCACTGTCAA
GAACAACGTGGCGTACGATAATGTTGACGCTGGTCTTGCTGTTTACGAGA
GCTCCAACGTCGAGATCGCCGGCAACACCTTCTACCACAACAAATTGCGT
CCAAGCGATGTGACCACATTTCCATCCAGAACAACAATGTCCATGACAAC
GGGAAGAATGGTTTGATGCTCCACCGCAGCTGCGACTACGCCACTGTCAA
GAACAACGTGGCGTACGATAATGTTGACGCTGGTCTTGCTGTTTACGAGA
GCTCCAACGTCGAGATCGCCGGCAACACCTTCTACCACAACAAA
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