mRNA_H-fluviatilis_contig103097.644.1 (mRNA) Heribaudiella fluviatilis SAG_13_90

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-fluviatilis_contig103097.644.1
Unique NamemRNA_H-fluviatilis_contig103097.644.1
TypemRNA
OrganismHeribaudiella fluviatilis SAG_13_90 (Heribaudiella fluviatilis SAG_13_90)
Homology
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A1R0GXT3_9FUNG (Protein mesA n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GXT3_9FUNG)

HSP 1 Score: 80.1 bits (196), Expect = 1.150e-15
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 1
Query:   46 MSLNVDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVI 246
            MSLNVDY+LV+EFDID+GS+LK +YP PTG             SILA+ M+P+GAH+R+ DWT+F+I
Sbjct:    1 MSLNVDYILVSEFDIDQGSILKHEYPRPTGQDP----------SILADFMLPDGAHARENDWTIFMI 57          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A2T9YDN7_9FUNG (UDENN domain-containing protein n=3 Tax=Harpellales TaxID=61421 RepID=A0A2T9YDN7_9FUNG)

HSP 1 Score: 79.0 bits (193), Expect = 2.920e-15
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1
Query:   55 NVDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVIPQ 252
            N+DY+L+AEFDID GS+LK QYP+PTG             SILAELM+P+GAH R+ DWT F++ Q
Sbjct:    6 NIDYILLAEFDIDSGSILKHQYPNPTGEDE----------SILAELMLPDGAHMRESDWTYFILNQ 61          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A1Y1WFI9_9FUNG (Spindle pole body interacting protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WFI9_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 1.890e-14
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 1
Query:   43 EMSLNVDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVIPQQ 255
            +  LNV+Y+L+AEFDID+G++LK QYP PTG    +          LAELM+P+GAH+R+ DWT+F + Q+
Sbjct:   14 QSQLNVEYILLAEFDIDRGAILKHQYPRPTGADDSH----------LAELMLPDGAHARESDWTMFFLNQK 74          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A2G5BH84_COERN (Spindle pole body interacting protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BH84_COERN)

HSP 1 Score: 74.7 bits (182), Expect = 8.990e-14
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   43 EMSLNVDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVIPQQ 255
            E   NV+Y+L+AEFDID+G++LK QYP PTG    +          LAELM+P+GAH+R+ DWT+F + Q+
Sbjct:   12 EPQQNVEYILLAEFDIDQGAILKHQYPRPTGADDSH----------LAELMLPDGAHARESDWTMFFLNQK 72          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A2T9YI58_9FUNG (UDENN domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YI58_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 1.220e-13
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 1
Query:   58 VDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVIPQ 252
            VDY+LVAEFDI++GSVLK QYP PTG    Y          LA+LM+P+GAH R+ DW++F++ Q
Sbjct:    7 VDYILVAEFDINEGSVLKQQYPEPTGEDESY----------LADLMLPDGAHLRETDWSIFLLNQ 61          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A137P8R5_CONC2 (Spindle pole body interacting protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P8R5_CONC2)

HSP 1 Score: 73.9 bits (180), Expect = 1.680e-13
Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 1
Query:    1 VLDEGRHVERIRSWEMSLNVDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVIPQQ 255
            +L +G +++ + S +   +  Y+L+AEFDIDKG+ L  QYP PTG+            S+LAE+M+P+GAH R+ DWT+F++ Q+
Sbjct:   41 ILHDGDNIQELNSAKFD-HAQYILLAEFDIDKGASLTHQYPEPTGMEE----------SLLAEMMLPDGAHLREEDWTIFLLNQK 114          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A0D6EJZ9_SPOSA (SPOSA6832_01934-mRNA-1:cds (Fragment) n=1 Tax=Sporidiobolus salmonicolor TaxID=5005 RepID=A0A0D6EJZ9_SPOSA)

HSP 1 Score: 72.0 bits (175), Expect = 8.070e-13
Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   58 VDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVIPQ 252
            VDYVL+AEFDID+GSVL+ QYP+PTG              +LAE M+P+GAH R  DWTVF + Q
Sbjct:   30 VDYVLLAEFDIDEGSVLRHQYPAPTGTDQH----------LLAEHMLPDGAHDRTEDWTVFYLNQ 84          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A058ZHP3_FONAL (Afi1 domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZHP3_FONAL)

HSP 1 Score: 72.0 bits (175), Expect = 8.070e-13
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1
Query:   58 VDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVF 240
            + YVL+AEFDIDKGSVL +QYPS TGV             +LAELM+P+GAH+R+ DWT F
Sbjct:   16 ISYVLLAEFDIDKGSVLSSQYPSETGVD----------VQLLAELMLPDGAHNREQDWTTF 66          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A0L6UEK7_9BASI (Afi1 domain-containing protein n=1 Tax=Puccinia sorghi TaxID=27349 RepID=A0A0L6UEK7_9BASI)

HSP 1 Score: 69.7 bits (169), Expect = 9.390e-13
Identity = 36/63 (57.14%), Postives = 41/63 (65.08%), Query Frame = 1
Query:   64 YVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVIPQ 252
            YVL+AEFDID GS LK QYPSPTG              ILA+LM+P+GAH R  DWTVF + Q
Sbjct:   65 YVLLAEFDIDTGSGLKHQYPSPTGTAEH----------ILADLMLPDGAHDRNEDWTVFFLNQ 117          
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Match: A0A7S0TD00_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TD00_9EUKA)

HSP 1 Score: 70.9 bits (172), Expect = 9.620e-13
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1
Query:   55 NVDYVLVAEFDIDKGSVLKTQYPSPTGVPHRYSLRIESVFSILAELMVPEGAHSRQLDWTVFVI 246
            NV YVL+AEFDIDKGS +K QYP P  +            +ILA+LM+PEGAH R+ DWT+F +
Sbjct:    6 NVQYVLLAEFDIDKGSTVKHQYPKPCPISE----------NILADLMLPEGAHLRETDWTIFFL 59          
The following BLAST results are available for this feature:
BLAST of mRNA_H-fluviatilis_contig103097.644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1R0GXT3_9FUNG1.150e-1556.72Protein mesA n=1 Tax=Smittium mucronatum TaxID=133... [more]
A0A2T9YDN7_9FUNG2.920e-1556.06UDENN domain-containing protein n=3 Tax=Harpellale... [more]
A0A1Y1WFI9_9FUNG1.890e-1449.30Spindle pole body interacting protein n=1 Tax=Lind... [more]
A0A2G5BH84_COERN8.990e-1449.30Spindle pole body interacting protein n=1 Tax=Coem... [more]
A0A2T9YI58_9FUNG1.220e-1353.85UDENN domain-containing protein n=1 Tax=Smittium s... [more]
A0A137P8R5_CONC21.680e-1341.18Spindle pole body interacting protein n=1 Tax=Coni... [more]
A0A0D6EJZ9_SPOSA8.070e-1355.38SPOSA6832_01934-mRNA-1:cds (Fragment) n=1 Tax=Spor... [more]
A0A058ZHP3_FONAL8.070e-1357.38Afi1 domain-containing protein n=1 Tax=Fonticula a... [more]
A0A0L6UEK7_9BASI9.390e-1357.14Afi1 domain-containing protein n=1 Tax=Puccinia so... [more]
A0A7S0TD00_9EUKA9.620e-1353.13Hypothetical protein (Fragment) n=1 Tax=Elphidium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-fluviatilis_contig103097contigH-fluviatilis_contig103097:540..794 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Heribaudiella fluviatilis SAG_13_902021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score72.8
Seed ortholog evalue8.8e-11
Seed eggNOG ortholog691883.XP_009493154.1
GOsGO:0000278,GO:0000281,GO:0000282,GO:0000910,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0005933,GO:0005935,GO:0007049,GO:0007163,GO:0008150,GO:0009987,GO:0016020,GO:0022402,GO:0030010,GO:0030427,GO:0030447,GO:0030448,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0051179,GO:0051301,GO:0051641,GO:0051666,GO:0061640,GO:0071944,GO:1903047
EggNOG free text desc.Spindle pole body interacting protein
EggNOG OGs2CMMJ@1,2QQUZ@2759,38CCZ@33154
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size255
Cds size255
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.876476-CDS-H-fluviatilis_contig103097:539..7941622929074.876476-CDS-H-fluviatilis_contig103097:539..794Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103097 540..794 +
1691135173.1279252-CDS-H-fluviatilis_contig103097:539..7941691135173.1279252-CDS-H-fluviatilis_contig103097:539..794Heribaudiella fluviatilis SAG_13_90CDSH-fluviatilis_contig103097 540..794 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-fluviatilis_contig103097.644.1prot_H-fluviatilis_contig103097.644.1Heribaudiella fluviatilis SAG_13_90polypeptideH-fluviatilis_contig103097 540..794 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-fluviatilis_contig103097.644.1

>prot_H-fluviatilis_contig103097.644.1 ID=prot_H-fluviatilis_contig103097.644.1|Name=mRNA_H-fluviatilis_contig103097.644.1|organism=Heribaudiella fluviatilis SAG_13_90|type=polypeptide|length=85bp
VLDEGRHVERIRSWEMSLNVDYVLVAEFDIDKGSVLKTQYPSPTGVPHRY
SLRIESVFSILAELMVPEGAHSRQLDWTVFVIPQQ
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mRNA from alignment at H-fluviatilis_contig103097:540..794+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-fluviatilis_contig103097.644.1 ID=mRNA_H-fluviatilis_contig103097.644.1|Name=mRNA_H-fluviatilis_contig103097.644.1|organism=Heribaudiella fluviatilis SAG_13_90|type=mRNA|length=255bp|location=Sequence derived from alignment at H-fluviatilis_contig103097:540..794+ (Heribaudiella fluviatilis SAG_13_90)
GTTTTGGACGAAGGGAGGCACGTAGAACGTATAAGATCCTGGGAGATGTC TCTCAATGTCGACTATGTGCTGGTCGCGGAGTTTGACATTGACAAAGGCA GTGTGCTCAAGACCCAGTATCCTTCTCCCACCGGGGTGCCACACAGGTAC TCATTGCGGATCGAGAGTGTTTTCAGTATATTGGCCGAATTGATGGTTCC AGAAGGTGCCCACTCACGTCAATTAGACTGGACTGTGTTTGTCATCCCTC AACAG
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Coding sequence (CDS) from alignment at H-fluviatilis_contig103097:540..794+

>mRNA_H-fluviatilis_contig103097.644.1 ID=mRNA_H-fluviatilis_contig103097.644.1|Name=mRNA_H-fluviatilis_contig103097.644.1|organism=Heribaudiella fluviatilis SAG_13_90|type=CDS|length=510bp|location=Sequence derived from alignment at H-fluviatilis_contig103097:540..794+ (Heribaudiella fluviatilis SAG_13_90)
GTTTTGGACGAAGGGAGGCACGTAGAACGTATAAGATCCTGGGAGATGTC
TCTCAATGTCGACTATGTGCTGGTCGCGGAGTTTGACATTGACAAAGGCA
GTGTGCTCAAGACCCAGTATCCTTCTCCCACCGGGGTGCCACACAGGTAC
TCATTGCGGATCGAGAGTGTTTTCAGTATATTGGCCGAATTGATGGTTCC
AGAAGGTGCCCACTCACGTCAATTAGACTGGACTGTGTTTGTCATCCCTC
AACAGGTTTTGGACGAAGGGAGGCACGTAGAACGTATAAGATCCTGGGAG
ATGTCTCTCAATGTCGACTATGTGCTGGTCGCGGAGTTTGACATTGACAA
AGGCAGTGTGCTCAAGACCCAGTATCCTTCTCCCACCGGGGTGCCACACA
GGTACTCATTGCGGATCGAGAGTGTTTTCAGTATATTGGCCGAATTGATG
GTTCCAGAAGGTGCCCACTCACGTCAATTAGACTGGACTGTGTTTGTCAT
CCCTCAACAG
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